RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 SZRD1Q7Z422 152 aa9.66□□□□□ -0.86
NIPBL-202ENST00000448238 OMA1Q96E52 524 aa9.66□□□□□ -0.86
NIPBL-202ENST00000448238 INTS4Q96HW7 963 aaKnown RBP9.66□□□□□ -0.86
NIPBL-202ENST00000448238 IARS2Q9NSE4 1012 aaKnown RBP9.66□□□□□ -0.86
NIPBL-202ENST00000448238 NUTM2GQ5VZR2 741 aa9.66□□□□□ -0.86
NIPBL-202ENST00000448238 LRRC59Q96AG4 307 aaKnown RBP9.66□□□□□ -0.86
NIPBL-202ENST00000448238 VPS16Q9H269 839 aa9.66□□□□□ -0.86
NIPBL-202ENST00000448238 MYH9P35579 1960 aaKnown RBP9.66□□□□□ -0.86
NIPBL-202ENST00000448238 DNAJC6O75061 913 aa9.66□□□□□ -0.86
NIPBL-202ENST00000448238 HSPD1P10809 573 aaKnown RBP9.66□□□□□ -0.86
NIPBL-202ENST00000448238 YWHAHQ04917 246 aaPredicted RBP9.66□□□□□ -0.86
NIPBL-202ENST00000448238 LDHAL6AQ6ZMR3 332 aa9.66□□□□□ -0.86
NIPBL-202ENST00000448238 PPP4R3CPQ6ZMV5 832 aa9.66□□□□□ -0.86
NIPBL-202ENST00000448238 TMX3Q96JJ7 454 aa9.66□□□□□ -0.86
NIPBL-202ENST00000448238 TMEM60Q9H2L4 133 aa9.66□□□□□ -0.86
NIPBL-202ENST00000448238 ZNF148Q9UQR1 794 aa9.66□□□□□ -0.86
NIPBL-202ENST00000448238 ITGAXP20702 1163 aa9.65□□□□□ -0.86
NIPBL-202ENST00000448238 MMRN1Q13201 1228 aa9.65□□□□□ -0.86
NIPBL-202ENST00000448238 CAPRIN2Q6IMN6 1127 aaKnown RBP9.65□□□□□ -0.86
NIPBL-202ENST00000448238 BATF3Q9NR55 127 aa9.65□□□□□ -0.86
NIPBL-202ENST00000448238 ZBTB21Q9ULJ3 1066 aa9.65□□□□□ -0.86
NIPBL-202ENST00000448238 IL10P22301 178 aa9.65□□□□□ -0.86
NIPBL-202ENST00000448238 CNGA3Q16281 694 aa9.65□□□□□ -0.86
NIPBL-202ENST00000448238 STX12Q86Y82 276 aa9.65□□□□□ -0.86
NIPBL-202ENST00000448238 PRDM11Q9NQV5 511 aa9.65□□□□□ -0.86
NIPBL-202ENST00000448238 ST7Q9NRC1 585 aa9.65□□□□□ -0.86
NIPBL-202ENST00000448238 LZTS1Q9Y250 596 aa9.65□□□□□ -0.86
NIPBL-202ENST00000448238 CUX2O14529 1486 aa9.65□□□□□ -0.86
NIPBL-202ENST00000448238 C11orf95C9JLR9 678 aaPredicted RBP9.65□□□□□ -0.86
NIPBL-202ENST00000448238 AGBL1Q96MI9 1066 aa9.65□□□□□ -0.86
NIPBL-202ENST00000448238 DNM3Q9UQ16 869 aa9.65□□□□□ -0.86
NIPBL-202ENST00000448238 AKNAQ7Z591 1439 aa9.65□□□□□ -0.86
NIPBL-202ENST00000448238 TSPAN9O75954 239 aa9.65□□□□□ -0.86
NIPBL-202ENST00000448238 PHKA1P46020 1223 aa9.65□□□□□ -0.86
NIPBL-202ENST00000448238 MCMDC2Q4G0Z9 681 aa9.65□□□□□ -0.86
NIPBL-202ENST00000448238 OTUD6AQ7L8S5 288 aa9.65□□□□□ -0.86
NIPBL-202ENST00000448238 CCDC103Q8IW40 242 aa9.65□□□□□ -0.86
NIPBL-202ENST00000448238 TEX2Q8IWB9 1127 aa9.65□□□□□ -0.86
NIPBL-202ENST00000448238 AZI2Q9H6S1 392 aa9.65□□□□□ -0.86
NIPBL-202ENST00000448238 MRPL44Q9H9J2 332 aaKnown RBP9.65□□□□□ -0.86
NIPBL-202ENST00000448238 ZNF556Q9HAH1 456 aa9.65□□□□□ -0.86
NIPBL-202ENST00000448238 DIAPH2O60879 1101 aa9.65□□□□□ -0.86
NIPBL-202ENST00000448238 ANP32DO95626 131 aa9.65□□□□□ -0.86
NIPBL-202ENST00000448238 BPIFB4P59827 614 aa9.65□□□□□ -0.86
NIPBL-202ENST00000448238 SF3A3Q12874 501 aaKnown RBP eCLIP9.65□□□□□ -0.86
NIPBL-202ENST00000448238 KRT72Q14CN4 511 aa9.65□□□□□ -0.86
NIPBL-202ENST00000448238 TRIP4Q15650 581 aaPredicted RBP9.65□□□□□ -0.86
NIPBL-202ENST00000448238 FRA10AC1Q70Z53 315 aa9.65□□□□□ -0.86
NIPBL-202ENST00000448238 STAMQ92783 540 aa9.65□□□□□ -0.86
NIPBL-202ENST00000448238 LVRNQ6Q4G3 990 aa9.65□□□□□ -0.87
NIPBL-202ENST00000448238 CATSPER3Q86XQ3 398 aa9.65□□□□□ -0.87
NIPBL-202ENST00000448238 RPAP3Q9H6T3 665 aaPredicted RBP9.65□□□□□ -0.87
NIPBL-202ENST00000448238 DMAP1Q9NPF5 467 aaPredicted RBP9.65□□□□□ -0.87
NIPBL-202ENST00000448238 ERAP1Q9NZ08 941 aa9.65□□□□□ -0.87
NIPBL-202ENST00000448238 DBF4Q9UBU7 674 aaPredicted RBP9.65□□□□□ -0.87
NIPBL-202ENST00000448238 ARHGEF37A1IGU5 675 aa9.65□□□□□ -0.87
NIPBL-202ENST00000448238 POC1B-GALNT4F8VUJ3 575 aa9.65□□□□□ -0.87
NIPBL-202ENST00000448238 NFIBO00712 420 aa9.65□□□□□ -0.87
NIPBL-202ENST00000448238 RGS20O76081 388 aa9.65□□□□□ -0.87
NIPBL-202ENST00000448238 KLHL12Q53G59 568 aa9.65□□□□□ -0.87
NIPBL-202ENST00000448238 TBC1D9Q6ZT07 1266 aa9.65□□□□□ -0.87
NIPBL-202ENST00000448238 SMCR8Q8TEV9 937 aaPredicted RBP9.65□□□□□ -0.87
NIPBL-202ENST00000448238 CEP95Q96GE4 821 aa9.65□□□□□ -0.87
NIPBL-202ENST00000448238 PJA2O43164 708 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 EXOC3O60645 756 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 ARIH2O95376 493 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 POTEIP0CG38 1075 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 DNM1Q05193 864 aaKnown RBP9.64□□□□□ -0.87
NIPBL-202ENST00000448238 LRMPQ12912 555 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 TNNI1P19237 187 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 CAPZA2P47755 286 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 HAND2P61296 217 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 ICE2Q659A1 982 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 SNX25Q9H3E2 840 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 RUBCNLQ9H714 662 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 VIPAS39Q9H9C1 493 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 APOBEC2Q9Y235 224 aaKnown RBP9.64□□□□□ -0.87
NIPBL-202ENST00000448238 CADPSQ9ULU8 1353 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 FAM107AO95990 144 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 RALBP11234 206 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 TAF1BQ53T94 588 aaPredicted RBP9.64□□□□□ -0.87
NIPBL-202ENST00000448238 FBXO18Q8NFZ0 1043 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 VWA3AA6NCI4 1184 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 LRRIQ3A6PVS8 624 aaPredicted RBP9.64□□□□□ -0.87
NIPBL-202ENST00000448238 GCNT3O95395 438 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 PPP2R1AP30153 589 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 PDE6CP51160 858 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 CENPPQ6IPU0 288 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 DNAAF3Q8N9W5 541 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 KCNH5Q8NCM2 988 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 CCT7Q99832 543 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 MED10Q9BTT4 135 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 KRT19P08727 400 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 SOX6P35712 828 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 MAGEA9P43362 315 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 TTLL11Q8NHH1 800 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 RASSF5Q8WWW0 418 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 RABGGTAQ92696 567 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 TINF2Q9BSI4 451 aa9.64□□□□□ -0.87
NIPBL-202ENST00000448238 UBE2OQ9C0C9 1292 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms