RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 DMAP1Q9NPF5 467 aaPredicted RBP5.61□□□□□ -1.51
SCN11A-202ENST00000444237 TMCO1Q9UM00 188 aa5.61□□□□□ -1.51
SCN11A-202ENST00000444237 TRAF3IP3Q9Y228 551 aa5.61□□□□□ -1.51
SCN11A-202ENST00000444237 C2CD2Q9Y426 696 aa5.61□□□□□ -1.51
SCN11A-202ENST00000444237 GYG2O15488 501 aa5.61□□□□□ -1.51
SCN11A-202ENST00000444237 ESRRAP11474 423 aaPredicted RBP5.61□□□□□ -1.51
SCN11A-202ENST00000444237 MCM7P33993 719 aa5.61□□□□□ -1.51
SCN11A-202ENST00000444237 HSPA1LP34931 641 aa5.61□□□□□ -1.51
SCN11A-202ENST00000444237 SLC7A5Q01650 507 aa5.61□□□□□ -1.51
SCN11A-202ENST00000444237 MED21Q13503 144 aa5.61□□□□□ -1.51
SCN11A-202ENST00000444237 TMEM259Q4ZIN3 620 aa5.61□□□□□ -1.51
SCN11A-202ENST00000444237 KRT80Q6KB66 452 aa5.61□□□□□ -1.51
SCN11A-202ENST00000444237 ANO5Q75V66 913 aa5.61□□□□□ -1.51
SCN11A-202ENST00000444237 DZIP3Q86Y13 1208 aaKnown RBP5.61□□□□□ -1.51
SCN11A-202ENST00000444237 ATP11CQ8NB49 1132 aa5.61□□□□□ -1.51
SCN11A-202ENST00000444237 WDR60Q8WVS4 1066 aa5.61□□□□□ -1.51
SCN11A-202ENST00000444237 PRPF31Q8WWY3 499 aaKnown RBP5.61□□□□□ -1.51
SCN11A-202ENST00000444237 NRBF2Q96F24 287 aa5.61□□□□□ -1.51
SCN11A-202ENST00000444237 PBKQ96KB5 322 aa5.61□□□□□ -1.51
SCN11A-202ENST00000444237 RILPQ96NA2 401 aa5.61□□□□□ -1.51
SCN11A-202ENST00000444237 HINFPQ9BQA5 517 aa5.61□□□□□ -1.51
SCN11A-202ENST00000444237 NAPBQ9H115 298 aa5.61□□□□□ -1.51
SCN11A-202ENST00000444237 TMOD2Q9NZR1 351 aa5.61□□□□□ -1.51
SCN11A-202ENST00000444237 AMFRQ9UKV5 643 aa5.61□□□□□ -1.51
SCN11A-202ENST00000444237 PLXNC1O60486 1568 aa5.61□□□□□ -1.51
SCN11A-202ENST00000444237 SERPINI2O75830 405 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 APOEP02649 317 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 ATP1A3P13637 1013 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 KDM5CP41229 1560 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 MAP3K12Q12852 859 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 CCDC105Q8IYK2 499 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 RIN2Q8WYP3 895 aaPredicted RBP5.6□□□□□ -1.51
SCN11A-202ENST00000444237 LRRC59Q96AG4 307 aaKnown RBP5.6□□□□□ -1.51
SCN11A-202ENST00000444237 FAM81BQ96LP2 452 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 LRRC37BQ96QE4 947 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 YTHDC2Q9H6S0 1430 aaKnown RBP5.6□□□□□ -1.51
SCN11A-202ENST00000444237 PACSIN2Q9UNF0 486 aaPredicted RBP5.6□□□□□ -1.51
SCN11A-202ENST00000444237 ATP8A1Q9Y2Q0 1164 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 SLC4A7Q9Y6M7 1214 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 RPAP1Q9BWH6 1393 aaPredicted RBP5.6□□□□□ -1.51
SCN11A-202ENST00000444237 SRRM3A6NNA2 597 aaPredicted RBP5.6□□□□□ -1.51
SCN11A-202ENST00000444237 PGRMC1O00264 195 aaKnown RBP5.6□□□□□ -1.51
SCN11A-202ENST00000444237 TRPA1O75762 1119 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 RESTQ13127 1097 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 RTN1Q16799 776 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 BZW1Q7L1Q6 419 aaKnown RBP5.6□□□□□ -1.51
SCN11A-202ENST00000444237 CATIPQ7Z7H3 387 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 SNX29Q8TEQ0 813 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 FMO2Q99518 471 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 BTBD7Q9P203 1132 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 SERTAD1Q9UHV2 236 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 CROCC2H7BZ55 1655 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 CCDC188H7C350 402 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 MAFGO15525 162 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 PPP6R2O75170 966 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 MX2P20592 715 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 BLVRAP53004 296 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 CABP4P57796 275 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 PSMC1P62191 440 aaKnown RBP5.6□□□□□ -1.51
SCN11A-202ENST00000444237 GRAMD1BQ3KR37 738 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 IRGCQ6NXR0 463 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 TMTC3Q6ZXV5 915 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 C8orf58Q8NAV2 365 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 TEKT1Q969V4 418 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 PPP1R14BQ96C90 147 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.6□□□□□ -1.51
SCN11A-202ENST00000444237 PITPNM3Q9BZ71 974 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 ZMYND12Q9H0C1 365 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 SCHIP1Q9P0W5 487 aaPredicted RBP5.6□□□□□ -1.51
SCN11A-202ENST00000444237 WDR37Q9Y2I8 494 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 USP15Q9Y4E8 981 aaPredicted RBP5.6□□□□□ -1.51
SCN11A-202ENST00000444237 PCDHA5Q9Y5H7 936 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 IGF2BP3O00425 579 aaKnown RBP eCLIP5.6□□□□□ -1.51
SCN11A-202ENST00000444237 STRNO43815 780 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 DNAJC6O75061 913 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 FESP07332 822 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 KRT10P13645 584 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 KRT2P35908 639 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 KLHL30Q0D2K2 578 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 TTLL11Q8NHH1 800 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 FERMT2Q96AC1 680 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 RNPC3Q96LT9 517 aaKnown RBP5.6□□□□□ -1.51
SCN11A-202ENST00000444237 PNKPQ96T60 521 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 EPS15L1Q9UBC2 864 aa5.6□□□□□ -1.51
SCN11A-202ENST00000444237 GRID2IPA4D2P6 1211 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 S100A1P23297 94 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 ARPC4P59998 168 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 CNNM4Q6P4Q7 775 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 PDXDC1Q6P996 788 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 MCM10Q7L590 875 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 VPS37DQ86XT2 251 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 REXO1L1PQ8IX06 675 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 SH2D3CQ8N5H7 860 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 DRAXINQ8NBI3 349 aaPredicted RBP5.59□□□□□ -1.51
SCN11A-202ENST00000444237 BBOF1Q8ND07 529 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 XPO6Q96QU8 1125 aaKnown RBP5.59□□□□□ -1.51
SCN11A-202ENST00000444237 GID8Q9NWU2 228 aa5.59□□□□□ -1.51
SCN11A-202ENST00000444237 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.59□□□□□ -1.51
SCN11A-202ENST00000444237 BZW2Q9Y6E2 419 aaKnown RBP5.59□□□□□ -1.51
SCN11A-202ENST00000444237 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms