RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 TAAR1Q96RJ0 339 aa12.47□□□□□ -0.41
HDAC6-211ENST00000443563 PSTPIP2Q9H939 334 aa12.47□□□□□ -0.41
HDAC6-211ENST00000443563 NCOA5Q9HCD5 579 aaKnown RBP12.47□□□□□ -0.41
HDAC6-211ENST00000443563 PXMP2Q9NR77 195 aa12.47□□□□□ -0.41
HDAC6-211ENST00000443563 BARHL2Q9NY43 387 aa12.47□□□□□ -0.41
HDAC6-211ENST00000443563 MKI67P46013 3256 aaKnown RBP12.47□□□□□ -0.41
HDAC6-211ENST00000443563 KIAA0100Q14667 2235 aaKnown RBP12.46□□□□□ -0.41
HDAC6-211ENST00000443563 ST18O60284 1047 aa12.46□□□□□ -0.41
HDAC6-211ENST00000443563 HOXA13P31271 388 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-211ENST00000443563 NTRK3Q16288 839 aa12.46□□□□□ -0.41
HDAC6-211ENST00000443563 CCDC144BQ3MJ40 725 aa12.46□□□□□ -0.41
HDAC6-211ENST00000443563 WWC2Q6AWC2 1192 aa12.46□□□□□ -0.41
HDAC6-211ENST00000443563 MCTP2Q6DN12 878 aa12.46□□□□□ -0.41
HDAC6-211ENST00000443563 IQSEC1Q6DN90 963 aa12.46□□□□□ -0.41
HDAC6-211ENST00000443563 GPKOWQ92917 476 aaPredicted RBP eCLIP12.46□□□□□ -0.412e-6■■□□□ 12.7
HDAC6-211ENST00000443563 PHKBQ93100 1093 aa12.46□□□□□ -0.41
HDAC6-211ENST00000443563 SHISA4Q96DD7 197 aa12.46□□□□□ -0.41
HDAC6-211ENST00000443563 LARP6Q9BRS8 491 aaKnown RBP12.46□□□□□ -0.41
HDAC6-211ENST00000443563 SLC26A6Q9BXS9 759 aa12.46□□□□□ -0.41
HDAC6-211ENST00000443563 BACH2Q9BYV9 841 aa12.46□□□□□ -0.41
HDAC6-211ENST00000443563 EHMT1Q9H9B1 1298 aa12.46□□□□□ -0.41
HDAC6-211ENST00000443563 SPC25Q9HBM1 224 aa12.46□□□□□ -0.41
HDAC6-211ENST00000443563 COL20A1Q9P218 1284 aa12.46□□□□□ -0.41
HDAC6-211ENST00000443563 TPCN1Q9ULQ1 816 aa12.46□□□□□ -0.41
HDAC6-211ENST00000443563 KIAA1217Q5T5P2 1943 aa12.46□□□□□ -0.42
HDAC6-211ENST00000443563 STXBP3O00186 592 aa12.45□□□□□ -0.42
HDAC6-211ENST00000443563 DUSP11O75319 330 aaKnown RBP12.45□□□□□ -0.42
HDAC6-211ENST00000443563 EIF3JO75822 258 aaKnown RBP12.45□□□□□ -0.42
HDAC6-211ENST00000443563 FARP2O94887 1054 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-211ENST00000443563 EIF2AK2P19525 551 aaKnown RBP12.45□□□□□ -0.42
HDAC6-211ENST00000443563 MLLT1Q03111 559 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-211ENST00000443563 TNFAIP2Q03169 654 aa12.45□□□□□ -0.42
HDAC6-211ENST00000443563 NECAB2Q7Z6G3 386 aa12.45□□□□□ -0.42
HDAC6-211ENST00000443563 RNF180Q86T96 592 aa12.45□□□□□ -0.42
HDAC6-211ENST00000443563 FCHSD1Q86WN1 690 aa12.45□□□□□ -0.42
HDAC6-211ENST00000443563 FAM177A1Q8N128 213 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-211ENST00000443563 CCDC148Q8NFR7 591 aa12.45□□□□□ -0.42
HDAC6-211ENST00000443563 ZSCAN31Q96LW9 406 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-211ENST00000443563 TBC1D32Q96NH3 1257 aa12.45□□□□□ -0.42
HDAC6-211ENST00000443563 KATNBL1Q9H079 304 aa12.45□□□□□ -0.42
HDAC6-211ENST00000443563 RIC8AQ9NPQ8 531 aa12.45□□□□□ -0.42
HDAC6-211ENST00000443563 XPNPEP3Q9NQH7 507 aa12.45□□□□□ -0.42
HDAC6-211ENST00000443563 LIMCH1Q9UPQ0 1083 aa12.45□□□□□ -0.42
HDAC6-211ENST00000443563 RBM47A0AV96 593 aaKnown RBP12.44□□□□□ -0.42
HDAC6-211ENST00000443563 ESYT2A0FGR8 921 aa12.44□□□□□ -0.42
HDAC6-211ENST00000443563 SMCO2A6NFE2 343 aa12.44□□□□□ -0.42
HDAC6-211ENST00000443563 SPDYE3A6NKU9 549 aa12.44□□□□□ -0.42
HDAC6-211ENST00000443563 KBTBD13C9JR72 458 aa12.44□□□□□ -0.42
HDAC6-211ENST00000443563 DNM1LO00429 736 aa12.44□□□□□ -0.42
HDAC6-211ENST00000443563 MEIS2O14770 477 aa12.44□□□□□ -0.42
HDAC6-211ENST00000443563 NKRFO15226 690 aaKnown RBP eCLIP12.44□□□□□ -0.42
HDAC6-211ENST00000443563 STAM2O75886 525 aa12.44□□□□□ -0.42
HDAC6-211ENST00000443563 DEXIO95424 95 aa12.44□□□□□ -0.42
HDAC6-211ENST00000443563 FOSP01100 380 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-211ENST00000443563 NR3C2P08235 984 aa12.44□□□□□ -0.42
HDAC6-211ENST00000443563 GNA11P29992 359 aa12.44□□□□□ -0.42
HDAC6-211ENST00000443563 CCND2P30279 289 aa12.44□□□□□ -0.42
HDAC6-211ENST00000443563 ADCY7P51828 1080 aa12.44□□□□□ -0.42
HDAC6-211ENST00000443563 SCRN1Q12765 414 aa12.44□□□□□ -0.42
HDAC6-211ENST00000443563 ANO1Q5XXA6 986 aa12.44□□□□□ -0.42
HDAC6-211ENST00000443563 TAPT1Q6NXT6 567 aa12.44□□□□□ -0.42
HDAC6-211ENST00000443563 XRRA1Q6P2D8 792 aa12.44□□□□□ -0.42
HDAC6-211ENST00000443563 EEPD1Q7L9B9 569 aa12.44□□□□□ -0.42
HDAC6-211ENST00000443563 FBXO16Q8IX29 292 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-211ENST00000443563 BICD2Q8TD16 824 aa12.44□□□□□ -0.42
HDAC6-211ENST00000443563 SCFD2Q8WU76 684 aa12.44□□□□□ -0.42
HDAC6-211ENST00000443563 KIF2CQ99661 725 aa12.44□□□□□ -0.42
HDAC6-211ENST00000443563 PDCD2LQ9BRP1 358 aa12.44□□□□□ -0.42
HDAC6-211ENST00000443563 C6orf50Q9HD87 102 aa12.44□□□□□ -0.42
HDAC6-211ENST00000443563 SH3GLB2Q9NR46 395 aa12.44□□□□□ -0.42
HDAC6-211ENST00000443563 Q9Y3F1 56 aa12.44□□□□□ -0.42
HDAC6-211ENST00000443563 FRMPD4Q14CM0 1322 aa12.43□□□□□ -0.42
HDAC6-211ENST00000443563 STK36Q9NRP7 1315 aa12.43□□□□□ -0.42
HDAC6-211ENST00000443563 MYCLP12524 364 aaPredicted RBP12.43□□□□□ -0.42
HDAC6-211ENST00000443563 XBP1P17861 261 aa12.43□□□□□ -0.42
HDAC6-211ENST00000443563 ADCYAP1R1P41586 468 aa12.43□□□□□ -0.42
HDAC6-211ENST00000443563 AP3B2Q13367 1082 aa12.43□□□□□ -0.42
HDAC6-211ENST00000443563 TTLL4Q14679 1199 aa12.43□□□□□ -0.42
HDAC6-211ENST00000443563 PGM5Q15124 567 aa12.43□□□□□ -0.42
HDAC6-211ENST00000443563 PKN1Q16512 942 aa12.43□□□□□ -0.42
HDAC6-211ENST00000443563 ME3Q16798 604 aa12.43□□□□□ -0.42
HDAC6-211ENST00000443563 KCNV1Q6PIU1 500 aa12.43□□□□□ -0.42
HDAC6-211ENST00000443563 USP17L6PQ6QN14 398 aa12.43□□□□□ -0.42
HDAC6-211ENST00000443563 NOL8Q76FK4 1167 aaKnown RBP12.43□□□□□ -0.42
HDAC6-211ENST00000443563 VSIG10LQ86VR7 867 aa12.43□□□□□ -0.42
HDAC6-211ENST00000443563 WASF1Q92558 559 aa12.43□□□□□ -0.42
HDAC6-211ENST00000443563 GTF3C6Q969F1 213 aa12.43□□□□□ -0.42
HDAC6-211ENST00000443563 HTATIP2Q9BUP3 242 aa12.43□□□□□ -0.42
HDAC6-211ENST00000443563 WDR11Q9BZH6 1224 aa12.43□□□□□ -0.42
HDAC6-211ENST00000443563 ZMYND12Q9H0C1 365 aa12.43□□□□□ -0.42
HDAC6-211ENST00000443563 AP5M1Q9H0R1 490 aa12.43□□□□□ -0.42
HDAC6-211ENST00000443563 C11orf49Q9H6J7 331 aa12.43□□□□□ -0.42
HDAC6-211ENST00000443563 SH2B1Q9NRF2 756 aaPredicted RBP12.43□□□□□ -0.42
HDAC6-211ENST00000443563 MCM2P49736 904 aa12.42□□□□□ -0.42
HDAC6-211ENST00000443563 GJA9P57773 515 aa12.42□□□□□ -0.42
HDAC6-211ENST00000443563 LRRC41Q15345 812 aa12.42□□□□□ -0.42
HDAC6-211ENST00000443563 GNPTABQ3T906 1256 aa12.42□□□□□ -0.42
HDAC6-211ENST00000443563 DUSP28Q4G0W2 176 aa12.42□□□□□ -0.42
HDAC6-211ENST00000443563 UBE2Q1Q7Z7E8 422 aa12.42□□□□□ -0.42
HDAC6-211ENST00000443563 PCSK9Q8NBP7 692 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms