RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 TTBK2Q6IQ55 1244 aa15.09■□□□□ 0.01
HERPUD1-204ENST00000439977 RRAGAQ7L523 313 aa15.09■□□□□ 0.01
HERPUD1-204ENST00000439977 PNMA5Q96PV4 448 aa15.09■□□□□ 0.01
HERPUD1-204ENST00000439977 MXD3Q9BW11 206 aa15.09■□□□□ 0.01
HERPUD1-204ENST00000439977 ZNF287Q9HBT7 754 aa15.09■□□□□ 0.01
HERPUD1-204ENST00000439977 EHD2Q9NZN4 543 aa15.09■□□□□ 0.01
HERPUD1-204ENST00000439977 ARHGAP20Q9P2F6 1191 aa15.09■□□□□ 0.01
HERPUD1-204ENST00000439977 CAPN6Q9Y6Q1 641 aa15.09■□□□□ 0.01
HERPUD1-204ENST00000439977 EDIL3O43854 480 aa15.09■□□□□ 0.01
HERPUD1-204ENST00000439977 MOCS3O95396 460 aa15.09■□□□□ 0.01
HERPUD1-204ENST00000439977 PDHBP11177 359 aa15.09■□□□□ 0.01
HERPUD1-204ENST00000439977 CAPN2P17655 700 aa15.09■□□□□ 0.01
HERPUD1-204ENST00000439977 USP14P54578 494 aa15.09■□□□□ 0.01
HERPUD1-204ENST00000439977 RHBDL3P58872 404 aa15.09■□□□□ 0.01
HERPUD1-204ENST00000439977 AMPD3Q01432 767 aa15.09■□□□□ 0.01
HERPUD1-204ENST00000439977 APBA1Q02410 837 aa15.09■□□□□ 0.01
HERPUD1-204ENST00000439977 SPA17Q15506 151 aa15.09■□□□□ 0.01
HERPUD1-204ENST00000439977 ENOX2Q16206 610 aaKnown RBP15.09■□□□□ 0.01
HERPUD1-204ENST00000439977 CNNM4Q6P4Q7 775 aa15.09■□□□□ 0.01
HERPUD1-204ENST00000439977 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.09■□□□□ 0.01
HERPUD1-204ENST00000439977 TXLNBQ8N3L3 684 aa15.09■□□□□ 0.01
HERPUD1-204ENST00000439977 SNX29Q8TEQ0 813 aa15.09■□□□□ 0.01
HERPUD1-204ENST00000439977 LZTS2Q9BRK4 669 aa15.09■□□□□ 0.01
HERPUD1-204ENST00000439977 NDST4Q9H3R1 872 aa15.09■□□□□ 0.01
HERPUD1-204ENST00000439977 DEF6Q9H4E7 631 aa15.09■□□□□ 0.01
HERPUD1-204ENST00000439977 PLEKHA4Q9H4M7 779 aa15.09■□□□□ 0.01
HERPUD1-204ENST00000439977 GPR75-ASB3A0A0A6YYF3 556 aa15.08■□□□□ 0
HERPUD1-204ENST00000439977 EIF3JO75822 258 aaKnown RBP15.08■□□□□ 0
HERPUD1-204ENST00000439977 AKR1B1P15121 316 aa15.08■□□□□ 0
HERPUD1-204ENST00000439977 GTF2IP78347 998 aa15.08■□□□□ 0
HERPUD1-204ENST00000439977 EZH2Q15910 746 aaKnown RBP15.08■□□□□ 0
HERPUD1-204ENST00000439977 ECM1Q16610 540 aa15.08■□□□□ 0
HERPUD1-204ENST00000439977 HSP90B2PQ58FF3 399 aa15.08■□□□□ 0
HERPUD1-204ENST00000439977 DPP8Q6V1X1 898 aaPredicted RBP15.08■□□□□ 0
HERPUD1-204ENST00000439977 LARP4BQ92615 738 aaKnown RBP15.08■□□□□ 0
HERPUD1-204ENST00000439977 POLLQ9UGP5 575 aa15.08■□□□□ 0
HERPUD1-204ENST00000439977 SNED1Q8TER0 1413 aa15.08■□□□□ 0
HERPUD1-204ENST00000439977 KIAA1551Q9HCM1 1747 aa15.08■□□□□ 0
HERPUD1-204ENST00000439977 MARCH6O60337 910 aa15.08■□□□□ 0
HERPUD1-204ENST00000439977 RC3H1Q5TC82 1133 aaKnown RBP15.08■□□□□ 0
HERPUD1-204ENST00000439977 PRR5LQ6MZQ0 368 aa15.08■□□□□ 0
HERPUD1-204ENST00000439977 NOC3LQ8WTT2 800 aaKnown RBP15.08■□□□□ 0
HERPUD1-204ENST00000439977 COG1Q8WTW3 980 aa15.08■□□□□ 0
HERPUD1-204ENST00000439977 IFIH1Q9BYX4 1025 aaKnown RBP15.08■□□□□ 0
HERPUD1-204ENST00000439977 NLRC4Q9NPP4 1024 aa15.08■□□□□ 0
HERPUD1-204ENST00000439977 ROBO3Q96MS0 1386 aa15.08■□□□□ 0
HERPUD1-204ENST00000439977 LAMB2P55268 1798 aa15.08■□□□□ 0
HERPUD1-204ENST00000439977 AKR1B10O60218 316 aa15.07■□□□□ 0
HERPUD1-204ENST00000439977 EIF4A3P38919 411 aaKnown RBP15.07■□□□□ 0
HERPUD1-204ENST00000439977 VWA3BQ502W6 1294 aa15.07■□□□□ 0
HERPUD1-204ENST00000439977 PAPD7Q5XG87 772 aaKnown RBP15.07■□□□□ 0
HERPUD1-204ENST00000439977 HDAC7Q8WUI4 952 aa15.07■□□□□ 0
HERPUD1-204ENST00000439977 DDX12PQ92771 950 aa15.07■□□□□ 0
HERPUD1-204ENST00000439977 SECISBP2LQ93073 1101 aaKnown RBP15.07■□□□□ 0
HERPUD1-204ENST00000439977 NUP58Q9BVL2 599 aa15.07■□□□□ 0
HERPUD1-204ENST00000439977 CUEDC2Q9H467 287 aa15.07■□□□□ 0
HERPUD1-204ENST00000439977 GGA1Q9UJY5 639 aa15.07■□□□□ 0
HERPUD1-204ENST00000439977 LRRC53A6NM62 1247 aa15.07■□□□□ 0
HERPUD1-204ENST00000439977 EIF3CLB5ME19 914 aaKnown RBP15.07■□□□□ 0
HERPUD1-204ENST00000439977 NCK2O43639 380 aa15.07■□□□□ 0
HERPUD1-204ENST00000439977 TMC4Q7Z404 712 aa15.07■□□□□ 0
HERPUD1-204ENST00000439977 FAM114A1Q8IWE2 563 aa15.07■□□□□ 0
HERPUD1-204ENST00000439977 MTMR9Q96QG7 549 aa15.07■□□□□ 0
HERPUD1-204ENST00000439977 EIF3CQ99613 913 aaKnown RBP15.07■□□□□ 0
HERPUD1-204ENST00000439977 CRACR2AQ9BSW2 395 aa15.07■□□□□ 0
HERPUD1-204ENST00000439977 FGFBP2Q9BYJ0 223 aa15.07■□□□□ 0
HERPUD1-204ENST00000439977 COL22A1Q8NFW1 1626 aaPredicted RBP15.07■□□□□ 0
HERPUD1-204ENST00000439977 SLC7A5Q01650 507 aa15.06■□□□□ 0
HERPUD1-204ENST00000439977 CENPPQ6IPU0 288 aa15.06■□□□□ 0
HERPUD1-204ENST00000439977 KCTD1Q719H9 257 aa15.06■□□□□ 0
HERPUD1-204ENST00000439977 NELFCDQ8IXH7 590 aa15.06■□□□□ 0
HERPUD1-204ENST00000439977 EXOC4Q96A65 974 aa15.06■□□□□ 0
HERPUD1-204ENST00000439977 DLEC1Q9Y238 1755 aa15.06■□□□□ 0
HERPUD1-204ENST00000439977 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.06■□□□□ 0
HERPUD1-204ENST00000439977 MPHOSPH10O00566 681 aaKnown RBP15.06■□□□□ 0
HERPUD1-204ENST00000439977 BUB1O43683 1085 aa15.06■□□□□ 0
HERPUD1-204ENST00000439977 ADCY7P51828 1080 aa15.06■□□□□ 0
HERPUD1-204ENST00000439977 KIF11P52732 1056 aa15.06■□□□□ 0
HERPUD1-204ENST00000439977 NAP1L1P55209 391 aaKnown RBP15.06■□□□□ 0
HERPUD1-204ENST00000439977 ARID5AQ03989 594 aa15.06■□□□□ 0
HERPUD1-204ENST00000439977 GFPT1Q06210 699 aaPredicted RBP15.06■□□□□ 0
HERPUD1-204ENST00000439977 FOXR1Q6PIV2 292 aa15.06■□□□□ 0
HERPUD1-204ENST00000439977 TRIM34Q9BYJ4 488 aa15.06■□□□□ 0
HERPUD1-204ENST00000439977 MTMR4Q9NYA4 1195 aa15.06■□□□□ 0
HERPUD1-204ENST00000439977 SALL4Q9UJQ4 1053 aa15.06■□□□□ 0
HERPUD1-204ENST00000439977 PCDHA13Q9Y5I0 950 aa15.06■□□□□ 0
HERPUD1-204ENST00000439977 SCNN1DP51172 638 aa15.06■□□□□ 0
HERPUD1-204ENST00000439977 VAV2P52735 878 aa15.06■□□□□ 0
HERPUD1-204ENST00000439977 NFRKBQ6P4R8 1299 aa15.06■□□□□ 0
HERPUD1-204ENST00000439977 ZSCAN29Q8IWY8 852 aaPredicted RBP15.06■□□□□ 0
HERPUD1-204ENST00000439977 CCDC170Q8IYT3 715 aa15.06■□□□□ 0
HERPUD1-204ENST00000439977 ERGIC2Q96RQ1 377 aa15.06■□□□□ 0
HERPUD1-204ENST00000439977 GBP3Q9H0R5 595 aa15.06■□□□□ 0
HERPUD1-204ENST00000439977 ZHX3Q9H4I2 956 aa15.06■□□□□ 0
HERPUD1-204ENST00000439977 RREB1Q92766 1687 aa15.05■□□□□ 0
HERPUD1-204ENST00000439977 NPHP3-ACAD11A0A0J9YXS1 232 aa15.05■□□□□ 0
HERPUD1-204ENST00000439977 PPP1R11O60927 126 aaPredicted RBP15.05■□□□□ 0
HERPUD1-204ENST00000439977 KRT79Q5XKE5 535 aa15.05■□□□□ 0
HERPUD1-204ENST00000439977 WDR93Q6P2C0 686 aa15.05■□□□□ 0
HERPUD1-204ENST00000439977 RETREG2Q8NC44 543 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms