RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 EIF2AK2P19525 551 aaKnown RBP15.35■□□□□ 0.05
LINC00399-201ENST00000439008 PSMA5P28066 241 aa15.35■□□□□ 0.05
LINC00399-201ENST00000439008 GJA9P57773 515 aa15.35■□□□□ 0.05
LINC00399-201ENST00000439008 BEX3Q00994 111 aa15.35■□□□□ 0.05
LINC00399-201ENST00000439008 PWP2Q15269 919 aaKnown RBP15.35■□□□□ 0.05
LINC00399-201ENST00000439008 KCNA10Q16322 511 aa15.35■□□□□ 0.05
LINC00399-201ENST00000439008 PRPF38BQ5VTL8 546 aaKnown RBP15.35■□□□□ 0.05
LINC00399-201ENST00000439008 USP17L6PQ6QN14 398 aa15.35■□□□□ 0.05
LINC00399-201ENST00000439008 COPS5Q92905 334 aa15.35■□□□□ 0.05
LINC00399-201ENST00000439008 ZFP91Q96JP5 570 aaPredicted RBP15.35■□□□□ 0.05
LINC00399-201ENST00000439008 MAF1Q9H063 256 aa15.35■□□□□ 0.05
LINC00399-201ENST00000439008 NCOA5Q9HCD5 579 aaKnown RBP15.35■□□□□ 0.05
LINC00399-201ENST00000439008 NID2Q14112 1375 aa15.35■□□□□ 0.05
LINC00399-201ENST00000439008 KBTBD13C9JR72 458 aa15.34■□□□□ 0.05
LINC00399-201ENST00000439008 RGS20O76081 388 aa15.34■□□□□ 0.05
LINC00399-201ENST00000439008 PDIA3P30101 505 aaKnown RBP15.34■□□□□ 0.05
LINC00399-201ENST00000439008 NKX3-2P78367 333 aa15.34■□□□□ 0.05
LINC00399-201ENST00000439008 PDE4DQ08499 809 aa15.34■□□□□ 0.05
LINC00399-201ENST00000439008 NTRK3Q16288 839 aa15.34■□□□□ 0.05
LINC00399-201ENST00000439008 WWC2Q6AWC2 1192 aa15.34■□□□□ 0.05
LINC00399-201ENST00000439008 IQSEC1Q6DN90 963 aa15.34■□□□□ 0.05
LINC00399-201ENST00000439008 CCDC62Q6P9F0 684 aa15.34■□□□□ 0.05
LINC00399-201ENST00000439008 SYNE3Q6ZMZ3 975 aa15.34■□□□□ 0.05
LINC00399-201ENST00000439008 C7orf61Q8IZ16 206 aa15.34■□□□□ 0.05
LINC00399-201ENST00000439008 NSUN6Q8TEA1 469 aaKnown RBP15.34■□□□□ 0.05
LINC00399-201ENST00000439008 IL17RAQ96F46 866 aa15.34■□□□□ 0.05
LINC00399-201ENST00000439008 PDCD2LQ9BRP1 358 aa15.34■□□□□ 0.05
LINC00399-201ENST00000439008 WDR11Q9BZH6 1224 aa15.34■□□□□ 0.05
LINC00399-201ENST00000439008 NAP1L2Q9ULW6 460 aaPredicted RBP15.34■□□□□ 0.05
LINC00399-201ENST00000439008 V9GY48 417 aaPredicted RBP15.34■□□□□ 0.05
LINC00399-201ENST00000439008 TRIOBPQ9H2D6 2365 aa15.33■□□□□ 0.04
LINC00399-201ENST00000439008 A0A1W2PQ45 241 aaPredicted RBP15.33■□□□□ 0.04
LINC00399-201ENST00000439008 A0A1W2PQY0 241 aa15.33■□□□□ 0.04
LINC00399-201ENST00000439008 GCOM1H8Y6P7 765 aaPredicted RBP15.33■□□□□ 0.04
LINC00399-201ENST00000439008 DYNC1LI2O43237 492 aaPredicted RBP15.33■□□□□ 0.04
LINC00399-201ENST00000439008 EVI5O60447 810 aa15.33■□□□□ 0.04
LINC00399-201ENST00000439008 DTNBO60941 627 aa15.33■□□□□ 0.04
LINC00399-201ENST00000439008 NR3C2P08235 984 aa15.33■□□□□ 0.04
LINC00399-201ENST00000439008 C6orf222P0C671 652 aaPredicted RBP15.33■□□□□ 0.04
LINC00399-201ENST00000439008 POLR2MP0CAP2 368 aa15.33■□□□□ 0.04
LINC00399-201ENST00000439008 CST5P28325 142 aaPredicted RBP15.33■□□□□ 0.04
LINC00399-201ENST00000439008 ACLYP53396 1101 aa15.33■□□□□ 0.04
LINC00399-201ENST00000439008 RCAN1P53805 252 aa15.33■□□□□ 0.04
LINC00399-201ENST00000439008 FGD1P98174 961 aa15.33■□□□□ 0.04
LINC00399-201ENST00000439008 DUSP28Q4G0W2 176 aa15.33■□□□□ 0.04
LINC00399-201ENST00000439008 ARHGEF16Q5VV41 709 aa15.33■□□□□ 0.04
LINC00399-201ENST00000439008 SLC39A5Q6ZMH5 540 aa15.33■□□□□ 0.04
LINC00399-201ENST00000439008 TLK2Q86UE8 772 aa15.33■□□□□ 0.04
LINC00399-201ENST00000439008 FCHSD1Q86WN1 690 aa15.33■□□□□ 0.04
LINC00399-201ENST00000439008 RBM28Q9NW13 759 aaKnown RBP15.33■□□□□ 0.04
LINC00399-201ENST00000439008 CYP46A1Q9Y6A2 500 aa15.33■□□□□ 0.04
LINC00399-201ENST00000439008 MYH7BA7E2Y1 1941 aa15.33■□□□□ 0.04
LINC00399-201ENST00000439008 ASGR1P07306 291 aa15.32■□□□□ 0.04
LINC00399-201ENST00000439008 METAP2P50579 478 aaKnown RBP eCLIP15.32■□□□□ 0.04
LINC00399-201ENST00000439008 RTP1P59025 263 aa15.32■□□□□ 0.04
LINC00399-201ENST00000439008 CCT2P78371 535 aaKnown RBP15.32■□□□□ 0.04
LINC00399-201ENST00000439008 SNX17Q15036 470 aa15.32■□□□□ 0.04
LINC00399-201ENST00000439008 PGM5Q15124 567 aa15.32■□□□□ 0.04
LINC00399-201ENST00000439008 PKN1Q16512 942 aa15.32■□□□□ 0.04
LINC00399-201ENST00000439008 UBE2SQ16763 222 aa15.32■□□□□ 0.04
LINC00399-201ENST00000439008 NOL8Q76FK4 1167 aaKnown RBP15.32■□□□□ 0.04
LINC00399-201ENST00000439008 RNF180Q86T96 592 aa15.32■□□□□ 0.04
LINC00399-201ENST00000439008 IWS1Q96ST2 819 aa15.32■□□□□ 0.04
LINC00399-201ENST00000439008 MAP3K20Q9NYL2 800 aaKnown RBP15.32■□□□□ 0.04
LINC00399-201ENST00000439008 SEC63Q9UGP8 760 aaKnown RBP15.32■□□□□ 0.04
LINC00399-201ENST00000439008 ZMYND8Q9ULU4 1186 aaPredicted RBP15.32■□□□□ 0.04
LINC00399-201ENST00000439008 FRMPD4Q14CM0 1322 aa15.32■□□□□ 0.04
LINC00399-201ENST00000439008 DOCK5Q9H7D0 1870 aa15.31■□□□□ 0.04
LINC00399-201ENST00000439008 STXBP3O00186 592 aa15.31■□□□□ 0.04
LINC00399-201ENST00000439008 SYN1P17600 705 aa15.31■□□□□ 0.04
LINC00399-201ENST00000439008 MRPS9P82933 396 aaKnown RBP15.31■□□□□ 0.04
LINC00399-201ENST00000439008 LY6KQ17RY6 165 aa15.31■□□□□ 0.04
LINC00399-201ENST00000439008 TRIM60Q495X7 471 aa15.31■□□□□ 0.04
LINC00399-201ENST00000439008 GNASQ5JWF2 1037 aa15.31■□□□□ 0.04
LINC00399-201ENST00000439008 SEPT14Q6ZU15 432 aa15.31■□□□□ 0.04
LINC00399-201ENST00000439008 HEATR3Q7Z4Q2 680 aa15.31■□□□□ 0.04
LINC00399-201ENST00000439008 VSIG10LQ86VR7 867 aa15.31■□□□□ 0.04
LINC00399-201ENST00000439008 SAMD3Q8N6K7 520 aa15.31■□□□□ 0.04
LINC00399-201ENST00000439008 PHKBQ93100 1093 aa15.31■□□□□ 0.04
LINC00399-201ENST00000439008 TSEN34Q9BSV6 310 aaKnown RBP15.31■□□□□ 0.04
LINC00399-201ENST00000439008 BCAS3Q9H6U6 928 aa15.31■□□□□ 0.04
LINC00399-201ENST00000439008 PDRG1Q9NUG6 133 aa15.31■□□□□ 0.04
LINC00399-201ENST00000439008 LAMA2P24043 3122 aaKnown RBP15.31■□□□□ 0.04
LINC00399-201ENST00000439008 PIK3CDO00329 1044 aa15.3■□□□□ 0.04
LINC00399-201ENST00000439008 GRIN2DO15399 1336 aa15.3■□□□□ 0.04
LINC00399-201ENST00000439008 MYCLP12524 364 aaPredicted RBP15.3■□□□□ 0.04
LINC00399-201ENST00000439008 ANAPC15P60006 121 aa15.3■□□□□ 0.04
LINC00399-201ENST00000439008 TRAF1Q13077 416 aa15.3■□□□□ 0.04
LINC00399-201ENST00000439008 STXBP2Q15833 593 aa15.3■□□□□ 0.04
LINC00399-201ENST00000439008 FSCN1Q16658 493 aaKnown RBP15.3■□□□□ 0.04
LINC00399-201ENST00000439008 SCFD2Q8WU76 684 aa15.3■□□□□ 0.04
LINC00399-201ENST00000439008 TPCN1Q9ULQ1 816 aa15.3■□□□□ 0.04
LINC00399-201ENST00000439008 Q9Y3F1 56 aa15.3■□□□□ 0.04
LINC00399-201ENST00000439008 LAMA3Q16787 3333 aa15.29■□□□□ 0.04
LINC00399-201ENST00000439008 EIF3JO75822 258 aaKnown RBP15.29■□□□□ 0.04
LINC00399-201ENST00000439008 TXNP10599 105 aaKnown RBP15.29■□□□□ 0.04
LINC00399-201ENST00000439008 SP2Q02086 613 aa15.29■□□□□ 0.04
LINC00399-201ENST00000439008 ARHGAP1Q07960 439 aa15.29■□□□□ 0.04
LINC00399-201ENST00000439008 SEMA3FQ13275 785 aa15.29■□□□□ 0.04
LINC00399-201ENST00000439008 CXCL17Q6UXB2 119 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms