RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 X6R8D5 127 aa5.21□□□□□ -1.58
LINC01239-201ENST00000433645 FAM221BA6H8Z2 402 aa5.2□□□□□ -1.58
LINC01239-201ENST00000433645 NFIBO00712 420 aa5.2□□□□□ -1.58
LINC01239-201ENST00000433645 PRODHO43272 600 aa5.2□□□□□ -1.58
LINC01239-201ENST00000433645 C8AP07357 584 aa5.2□□□□□ -1.58
LINC01239-201ENST00000433645 TMEM253P0C7T8 217 aa5.2□□□□□ -1.58
LINC01239-201ENST00000433645 VIPR1P32241 457 aa5.2□□□□□ -1.58
LINC01239-201ENST00000433645 SLC6A11P48066 632 aa5.2□□□□□ -1.58
LINC01239-201ENST00000433645 SUMO1P63165 101 aaKnown RBP5.2□□□□□ -1.58
LINC01239-201ENST00000433645 SRSF3P84103 164 aaKnown RBP5.2□□□□□ -1.58
LINC01239-201ENST00000433645 LSAMPQ13449 338 aa5.2□□□□□ -1.58
LINC01239-201ENST00000433645 WWC2Q6AWC2 1192 aa5.2□□□□□ -1.58
LINC01239-201ENST00000433645 STYK1Q6J9G0 422 aa5.2□□□□□ -1.58
LINC01239-201ENST00000433645 ZC3H14Q6PJT7 736 aaKnown RBP5.2□□□□□ -1.58
LINC01239-201ENST00000433645 RCBTB1Q8NDN9 531 aa5.2□□□□□ -1.58
LINC01239-201ENST00000433645 PMFBP1Q8TBY8 1022 aa5.2□□□□□ -1.58
LINC01239-201ENST00000433645 THAP3Q8WTV1 239 aaPredicted RBP5.2□□□□□ -1.58
LINC01239-201ENST00000433645 KCNN1Q92952 543 aa5.2□□□□□ -1.58
LINC01239-201ENST00000433645 TSPAN17Q96FV3 270 aa5.2□□□□□ -1.58
LINC01239-201ENST00000433645 PEX11GQ96HA9 241 aa5.2□□□□□ -1.58
LINC01239-201ENST00000433645 GULP1Q9UBP9 304 aa5.2□□□□□ -1.58
LINC01239-201ENST00000433645 TMEFF2Q9UIK5 374 aaPredicted RBP5.2□□□□□ -1.58
LINC01239-201ENST00000433645 MBD1Q9UIS9 605 aaPredicted RBP5.2□□□□□ -1.58
LINC01239-201ENST00000433645 KDM2BQ8NHM5 1336 aa5.2□□□□□ -1.58
LINC01239-201ENST00000433645 IRS2Q9Y4H2 1338 aa5.2□□□□□ -1.58
LINC01239-201ENST00000433645 CCDC85CA6NKD9 419 aa5.19□□□□□ -1.58
LINC01239-201ENST00000433645 KRT1P04264 644 aa5.19□□□□□ -1.58
LINC01239-201ENST00000433645 YBX3P16989 372 aaKnown RBP eCLIP5.19□□□□□ -1.58
LINC01239-201ENST00000433645 DLG4P78352 724 aa5.19□□□□□ -1.58
LINC01239-201ENST00000433645 PRSS53Q2L4Q9 553 aa5.19□□□□□ -1.58
LINC01239-201ENST00000433645 PLEKHN1Q494U1 663 aaPredicted RBP5.19□□□□□ -1.58
LINC01239-201ENST00000433645 ZNF648Q5T619 568 aaPredicted RBP5.19□□□□□ -1.58
LINC01239-201ENST00000433645 MAMDC2Q7Z304 686 aaPredicted RBP5.19□□□□□ -1.58
LINC01239-201ENST00000433645 DCP2Q8IU60 420 aaKnown RBP5.19□□□□□ -1.58
LINC01239-201ENST00000433645 IPO9Q96P70 1041 aaKnown RBP5.19□□□□□ -1.58
LINC01239-201ENST00000433645 RNF38Q9H0F5 515 aa5.19□□□□□ -1.58
LINC01239-201ENST00000433645 SIRT5Q9NXA8 310 aa5.19□□□□□ -1.58
LINC01239-201ENST00000433645 CDK11AQ9UQ88 783 aaPredicted RBP5.19□□□□□ -1.58
LINC01239-201ENST00000433645 RWDD3Q9Y3V2 267 aa5.19□□□□□ -1.58
LINC01239-201ENST00000433645 TRBV23-1A0A0A0MS06 115 aa5.18□□□□□ -1.58
LINC01239-201ENST00000433645 NUDT19A8MXV4 375 aa5.18□□□□□ -1.58
LINC01239-201ENST00000433645 ETV2O00321 342 aaPredicted RBP5.18□□□□□ -1.58
LINC01239-201ENST00000433645 N4BP3O15049 544 aa5.18□□□□□ -1.58
LINC01239-201ENST00000433645 DIAPH1O60610 1272 aaKnown RBP5.18□□□□□ -1.58
LINC01239-201ENST00000433645 FUCA1P04066 466 aa5.18□□□□□ -1.58
LINC01239-201ENST00000433645 NAT1P18440 290 aa5.18□□□□□ -1.58
LINC01239-201ENST00000433645 TACR1P25103 407 aa5.18□□□□□ -1.58
LINC01239-201ENST00000433645 RAP1GAPP47736 663 aa5.18□□□□□ -1.58
LINC01239-201ENST00000433645 TARBP2Q15633 366 aaKnown RBP5.18□□□□□ -1.58
LINC01239-201ENST00000433645 NTRK3Q16288 839 aa5.18□□□□□ -1.58
LINC01239-201ENST00000433645 C2orf27AQ580R0 203 aa5.18□□□□□ -1.58
LINC01239-201ENST00000433645 TMEM132EQ6IEE7 984 aa5.18□□□□□ -1.58
LINC01239-201ENST00000433645 ZSWIM2Q8NEG5 633 aa5.18□□□□□ -1.58
LINC01239-201ENST00000433645 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.18□□□□□ -1.58
LINC01239-201ENST00000433645 USP33Q8TEY7 942 aa5.18□□□□□ -1.58
LINC01239-201ENST00000433645 SEC14L1Q92503 715 aa5.18□□□□□ -1.58
LINC01239-201ENST00000433645 PTPRN2Q92932 1015 aa5.18□□□□□ -1.58
LINC01239-201ENST00000433645 TMEM169Q96HH4 297 aa5.18□□□□□ -1.58
LINC01239-201ENST00000433645 MRFAP1L1Q96HT8 127 aa5.18□□□□□ -1.58
LINC01239-201ENST00000433645 DNAJC7Q99615 494 aa5.18□□□□□ -1.58
LINC01239-201ENST00000433645 CDC6Q99741 560 aa5.18□□□□□ -1.58
LINC01239-201ENST00000433645 DHRS4Q9BTZ2 278 aa5.18□□□□□ -1.58
LINC01239-201ENST00000433645 LNPKQ9C0E8 428 aa5.18□□□□□ -1.58
LINC01239-201ENST00000433645 GCM1Q9NP62 436 aa5.18□□□□□ -1.58
LINC01239-201ENST00000433645 CD320Q9NPF0 282 aa5.18□□□□□ -1.58
LINC01239-201ENST00000433645 MARCH2Q9P0N8 246 aa5.18□□□□□ -1.58
LINC01239-201ENST00000433645 PFDN2Q9UHV9 154 aa5.18□□□□□ -1.58
LINC01239-201ENST00000433645 TCAF2A6NFQ2 919 aa5.17□□□□□ -1.58
LINC01239-201ENST00000433645 DBX1A6NMT0 343 aa5.17□□□□□ -1.58
LINC01239-201ENST00000433645 C22orf46C9J442 243 aa5.17□□□□□ -1.58
LINC01239-201ENST00000433645 F8W031 263 aaPredicted RBP5.17□□□□□ -1.58
LINC01239-201ENST00000433645 IRS4O14654 1257 aaPredicted RBP5.17□□□□□ -1.58
LINC01239-201ENST00000433645 FAM153BP0C7A2 387 aa5.17□□□□□ -1.58
LINC01239-201ENST00000433645 FBLN1P23142 703 aa5.17□□□□□ -1.58
LINC01239-201ENST00000433645 BCL6P41182 706 aa5.17□□□□□ -1.58
LINC01239-201ENST00000433645 GPR85P60893 370 aa5.17□□□□□ -1.58
LINC01239-201ENST00000433645 CHRNA2Q15822 529 aa5.17□□□□□ -1.58
LINC01239-201ENST00000433645 KIZQ2M2Z5 673 aa5.17□□□□□ -1.58
LINC01239-201ENST00000433645 YOD1Q5VVQ6 348 aaPredicted RBP5.17□□□□□ -1.58
LINC01239-201ENST00000433645 CYP4F22Q6NT55 531 aa5.17□□□□□ -1.58
LINC01239-201ENST00000433645 USP53Q70EK8 1073 aa5.17□□□□□ -1.58
LINC01239-201ENST00000433645 CEP68Q76N32 757 aa5.17□□□□□ -1.58
LINC01239-201ENST00000433645 TMC6Q7Z403 805 aa5.17□□□□□ -1.58
LINC01239-201ENST00000433645 LDHDQ86WU2 507 aa5.17□□□□□ -1.58
LINC01239-201ENST00000433645 ANKLE2Q86XL3 938 aa5.17□□□□□ -1.58
LINC01239-201ENST00000433645 IFNL3Q8IZI9 196 aa5.17□□□□□ -1.58
LINC01239-201ENST00000433645 CPA5Q8WXQ8 436 aa5.17□□□□□ -1.58
LINC01239-201ENST00000433645 KISS1RQ969F8 398 aaPredicted RBP5.17□□□□□ -1.58
LINC01239-201ENST00000433645 TRMT2BQ96GJ1 504 aaKnown RBP5.17□□□□□ -1.58
LINC01239-201ENST00000433645 KRTAP4-12Q9BQ66 201 aa5.17□□□□□ -1.58
LINC01239-201ENST00000433645 AP5M1Q9H0R1 490 aa5.17□□□□□ -1.58
LINC01239-201ENST00000433645 CNTD2Q9H8S5 307 aa5.17□□□□□ -1.58
LINC01239-201ENST00000433645 FBLN5Q9UBX5 448 aa5.17□□□□□ -1.58
LINC01239-201ENST00000433645 COA3Q9Y2R0 106 aaPredicted RBP5.17□□□□□ -1.58
LINC01239-201ENST00000433645 AQP7O14520 342 aa5.16□□□□□ -1.58
LINC01239-201ENST00000433645 NTRK1P04629 796 aa5.16□□□□□ -1.58
LINC01239-201ENST00000433645 LCP1P13796 627 aa5.16□□□□□ -1.58
LINC01239-201ENST00000433645 SDHBP21912 280 aa5.16□□□□□ -1.58
LINC01239-201ENST00000433645 GABREP78334 506 aa5.16□□□□□ -1.58
LINC01239-201ENST00000433645 PRR5P85299 388 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms