RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 SNAI1O95863 264 aaPredicted RBP17.84■□□□□ 0.45
TREX1-201ENST00000433541 MYCLP12524 364 aaPredicted RBP17.84■□□□□ 0.45
TREX1-201ENST00000433541 AKR1A1P14550 325 aa17.84■□□□□ 0.45
TREX1-201ENST00000433541 GJA8P48165 433 aa17.84■□□□□ 0.45
TREX1-201ENST00000433541 ME3Q16798 604 aa17.84■□□□□ 0.45
TREX1-201ENST00000433541 PPP1R18Q6NYC8 613 aa17.84■□□□□ 0.45
TREX1-201ENST00000433541 USP17L6PQ6QN14 398 aa17.84■□□□□ 0.45
TREX1-201ENST00000433541 BARHL2Q9NY43 387 aa17.84■□□□□ 0.45
TREX1-201ENST00000433541 COL20A1Q9P218 1284 aa17.84■□□□□ 0.45
TREX1-201ENST00000433541 FAM184BQ9ULE4 1060 aa17.84■□□□□ 0.45
TREX1-201ENST00000433541 SMCO2A6NFE2 343 aa17.83■□□□□ 0.44
TREX1-201ENST00000433541 SPDYE3A6NKU9 549 aa17.83■□□□□ 0.44
TREX1-201ENST00000433541 RARBP10826 455 aa17.83■□□□□ 0.44
TREX1-201ENST00000433541 NTRK3Q16288 839 aa17.83■□□□□ 0.44
TREX1-201ENST00000433541 UBE2SQ16763 222 aa17.83■□□□□ 0.44
TREX1-201ENST00000433541 CCDC148Q8NFR7 591 aa17.83■□□□□ 0.44
TREX1-201ENST00000433541 GTF3C6Q969F1 213 aa17.83■□□□□ 0.44
TREX1-201ENST00000433541 EHMT1Q9H9B1 1298 aa17.83■□□□□ 0.44
TREX1-201ENST00000433541 PXMP2Q9NR77 195 aa17.83■□□□□ 0.44
TREX1-201ENST00000433541 LOC102724159A0A0B4J2E5 919 aa17.82■□□□□ 0.44
TREX1-201ENST00000433541 DEXIO95424 95 aa17.82■□□□□ 0.44
TREX1-201ENST00000433541 PWP2Q15269 919 aaKnown RBP17.82■□□□□ 0.44
TREX1-201ENST00000433541 STXBP2Q15833 593 aa17.82■□□□□ 0.44
TREX1-201ENST00000433541 CCDC144BQ3MJ40 725 aa17.82■□□□□ 0.44
TREX1-201ENST00000433541 CCDC83Q8IWF9 413 aa17.82■□□□□ 0.44
TREX1-201ENST00000433541 ZSCAN31Q96LW9 406 aaPredicted RBP17.82■□□□□ 0.44
TREX1-201ENST00000433541 IWS1Q96ST2 819 aa17.82■□□□□ 0.44
TREX1-201ENST00000433541 C6orf50Q9HD87 102 aa17.82■□□□□ 0.44
TREX1-201ENST00000433541 VTA1Q9NP79 307 aa17.82■□□□□ 0.44
TREX1-201ENST00000433541 DTNBO60941 627 aa17.81■□□□□ 0.44
TREX1-201ENST00000433541 ZNF865P0CJ78 1059 aaPredicted RBP17.81■□□□□ 0.44
TREX1-201ENST00000433541 XBP1P17861 261 aa17.81■□□□□ 0.44
TREX1-201ENST00000433541 CCND2P30279 289 aa17.81■□□□□ 0.44
TREX1-201ENST00000433541 NLRP5P59047 1200 aa17.81■□□□□ 0.44
TREX1-201ENST00000433541 IFFO2Q5TF58 517 aa17.81■□□□□ 0.44
TREX1-201ENST00000433541 LENG1Q96BZ8 264 aaPredicted RBP17.81■□□□□ 0.44
TREX1-201ENST00000433541 GLT8D2Q9H1C3 349 aa17.81■□□□□ 0.44
TREX1-201ENST00000433541 XPNPEP3Q9NQH7 507 aa17.81■□□□□ 0.44
TREX1-201ENST00000433541 SH2B1Q9NRF2 756 aaPredicted RBP17.81■□□□□ 0.44
TREX1-201ENST00000433541 VPS54Q9P1Q0 977 aa17.81■□□□□ 0.44
TREX1-201ENST00000433541 FARP2O94887 1054 aaPredicted RBP17.8■□□□□ 0.44
TREX1-201ENST00000433541 IGHA2P01877 340 aa17.8■□□□□ 0.44
TREX1-201ENST00000433541 NR3C2P08235 984 aa17.8■□□□□ 0.44
TREX1-201ENST00000433541 GNA11P29992 359 aa17.8■□□□□ 0.44
TREX1-201ENST00000433541 ADCYAP1R1P41586 468 aa17.8■□□□□ 0.44
TREX1-201ENST00000433541 GHRHRQ02643 423 aa17.8■□□□□ 0.44
TREX1-201ENST00000433541 TNFAIP2Q03169 654 aa17.8■□□□□ 0.44
TREX1-201ENST00000433541 PGM5Q15124 567 aa17.8■□□□□ 0.44
TREX1-201ENST00000433541 PKN1Q16512 942 aa17.8■□□□□ 0.44
TREX1-201ENST00000433541 TYW1BQ6NUM6 668 aa17.8■□□□□ 0.44
TREX1-201ENST00000433541 SEPT14Q6ZU15 432 aa17.8■□□□□ 0.44
TREX1-201ENST00000433541 WASF1Q92558 559 aa17.8■□□□□ 0.44
TREX1-201ENST00000433541 SPC25Q9HBM1 224 aa17.8■□□□□ 0.44
TREX1-201ENST00000433541 RIC8AQ9NPQ8 531 aa17.8■□□□□ 0.44
TREX1-201ENST00000433541 ORC3Q9UBD5 711 aaPredicted RBP17.8■□□□□ 0.44
TREX1-201ENST00000433541 MYH7BA7E2Y1 1941 aa17.8■□□□□ 0.44
TREX1-201ENST00000433541 KBTBD13C9JR72 458 aa17.79■□□□□ 0.44
TREX1-201ENST00000433541 PIK3CDO00329 1044 aa17.79■□□□□ 0.44
TREX1-201ENST00000433541 MEIS2O14770 477 aa17.79■□□□□ 0.44
TREX1-201ENST00000433541 BICD2Q8TD16 824 aa17.79■□□□□ 0.44
TREX1-201ENST00000433541 PDCD2LQ9BRP1 358 aa17.79■□□□□ 0.44
TREX1-201ENST00000433541 PDGFCQ9NRA1 345 aa17.79■□□□□ 0.44
TREX1-201ENST00000433541 STK36Q9NRP7 1315 aa17.78■□□□□ 0.44
TREX1-201ENST00000433541 PGK1P00558 417 aa17.78■□□□□ 0.44
TREX1-201ENST00000433541 EDNRBP24530 442 aa17.78■□□□□ 0.44
TREX1-201ENST00000433541 FOSBP53539 338 aa17.78■□□□□ 0.44
TREX1-201ENST00000433541 LHX8Q68G74 356 aa17.78■□□□□ 0.44
TREX1-201ENST00000433541 REXO1Q8N1G1 1221 aaKnown RBP17.78■□□□□ 0.44
TREX1-201ENST00000433541 ARRDC4Q8NCT1 418 aa17.78■□□□□ 0.44
TREX1-201ENST00000433541 IL27Q8NEV9 243 aa17.78■□□□□ 0.44
TREX1-201ENST00000433541 MORC4Q8TE76 937 aa17.78■□□□□ 0.44
TREX1-201ENST00000433541 SCFD2Q8WU76 684 aa17.78■□□□□ 0.44
TREX1-201ENST00000433541 SHISA4Q96DD7 197 aa17.78■□□□□ 0.44
TREX1-201ENST00000433541 ZFP91Q96JP5 570 aaPredicted RBP17.78■□□□□ 0.44
TREX1-201ENST00000433541 PGBD1Q96JS3 809 aa17.78■□□□□ 0.44
TREX1-201ENST00000433541 AIFM3Q96NN9 605 aa17.78■□□□□ 0.44
TREX1-201ENST00000433541 WDR11Q9BZH6 1224 aa17.78■□□□□ 0.44
TREX1-201ENST00000433541 AP5M1Q9H0R1 490 aa17.78■□□□□ 0.44
TREX1-201ENST00000433541 SH3GLB2Q9NR46 395 aa17.78■□□□□ 0.44
TREX1-201ENST00000433541 PCDHA6Q9UN73 950 aa17.78■□□□□ 0.44
TREX1-201ENST00000433541 PCDHA8Q9Y5H6 950 aa17.78■□□□□ 0.44
TREX1-201ENST00000433541 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.77■□□□□ 0.44
TREX1-201ENST00000433541 EIF3JO75822 258 aaKnown RBP17.77■□□□□ 0.44
TREX1-201ENST00000433541 FOSP01100 380 aaPredicted RBP17.77■□□□□ 0.44
TREX1-201ENST00000433541 C6orf222P0C671 652 aaPredicted RBP17.77■□□□□ 0.44
TREX1-201ENST00000433541 CAPN2P17655 700 aa17.77■□□□□ 0.44
TREX1-201ENST00000433541 MCM2P49736 904 aa17.77■□□□□ 0.44
TREX1-201ENST00000433541 TRIM29Q14134 588 aa17.77■□□□□ 0.44
TREX1-201ENST00000433541 TTLL4Q14679 1199 aa17.77■□□□□ 0.44
TREX1-201ENST00000433541 GJC2Q5T442 439 aaPredicted RBP17.77■□□□□ 0.44
TREX1-201ENST00000433541 JAKMIP3Q5VZ66 844 aa17.77■□□□□ 0.44
TREX1-201ENST00000433541 IQSEC1Q6DN90 963 aa17.77■□□□□ 0.44
TREX1-201ENST00000433541 RNF180Q86T96 592 aa17.77■□□□□ 0.44
TREX1-201ENST00000433541 TLK2Q86UE8 772 aa17.77■□□□□ 0.44
TREX1-201ENST00000433541 IL31RAQ8NI17 732 aa17.77■□□□□ 0.44
TREX1-201ENST00000433541 ALG1Q9BT22 464 aa17.77■□□□□ 0.44
TREX1-201ENST00000433541 KATNBL1Q9H079 304 aa17.77■□□□□ 0.44
TREX1-201ENST00000433541 CRISPLD2Q9H0B8 497 aa17.77■□□□□ 0.44
TREX1-201ENST00000433541 TMEM260Q9NX78 707 aa17.77■□□□□ 0.44
TREX1-201ENST00000433541 OGDHLQ9ULD0 1010 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms