RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 SHISA4Q96DD7 197 aa21.16■□□□□ 0.98
RFTN1-202ENST00000431547 AIFM3Q96NN9 605 aa21.16■□□□□ 0.98
RFTN1-202ENST00000431547 ABHD16BQ9H3Z7 469 aa21.16■□□□□ 0.98
RFTN1-202ENST00000431547 HMX1Q9NP08 348 aaPredicted RBP21.16■□□□□ 0.98
RFTN1-202ENST00000431547 PXMP2Q9NR77 195 aa21.16■□□□□ 0.98
RFTN1-202ENST00000431547 CNPY2Q9Y2B0 182 aa21.16■□□□□ 0.98
RFTN1-202ENST00000431547 CYBAP13498 195 aa21.15■□□□□ 0.98
RFTN1-202ENST00000431547 CCL5P13501 91 aa21.15■□□□□ 0.98
RFTN1-202ENST00000431547 XBP1P17861 261 aa21.15■□□□□ 0.98
RFTN1-202ENST00000431547 HMGN5P82970 282 aaKnown RBP21.15■□□□□ 0.98
RFTN1-202ENST00000431547 MTFR1Q15390 333 aa21.15■□□□□ 0.98
RFTN1-202ENST00000431547 UBE2SQ16763 222 aa21.15■□□□□ 0.98
RFTN1-202ENST00000431547 PRAMEF19Q5SWL8 479 aa21.15■□□□□ 0.98
RFTN1-202ENST00000431547 TRPV1Q8NER1 839 aa21.15■□□□□ 0.98
RFTN1-202ENST00000431547 ALG1Q9BT22 464 aa21.15■□□□□ 0.98
RFTN1-202ENST00000431547 FOSP01100 380 aaPredicted RBP21.14■□□□□ 0.97
RFTN1-202ENST00000431547 ZNF865P0CJ78 1059 aaPredicted RBP21.14■□□□□ 0.97
RFTN1-202ENST00000431547 NLRP5P59047 1200 aa21.14■□□□□ 0.97
RFTN1-202ENST00000431547 PDE4DQ08499 809 aa21.14■□□□□ 0.97
RFTN1-202ENST00000431547 ACVR2BQ13705 512 aa21.14■□□□□ 0.97
RFTN1-202ENST00000431547 MCTP2Q6DN12 878 aa21.14■□□□□ 0.97
RFTN1-202ENST00000431547 BICD2Q8TD16 824 aa21.14■□□□□ 0.97
RFTN1-202ENST00000431547 PDCD2LQ9BRP1 358 aa21.14■□□□□ 0.97
RFTN1-202ENST00000431547 KATNBL1Q9H079 304 aa21.14■□□□□ 0.97
RFTN1-202ENST00000431547 UNC93B1Q9H1C4 597 aa21.14■□□□□ 0.97
RFTN1-202ENST00000431547 FRMPD4Q14CM0 1322 aa21.13■□□□□ 0.97
RFTN1-202ENST00000431547 SPDYE3A6NKU9 549 aa21.13■□□□□ 0.97
RFTN1-202ENST00000431547 NR3C2P08235 984 aa21.13■□□□□ 0.97
RFTN1-202ENST00000431547 EIF2AK2P19525 551 aaKnown RBP21.13■□□□□ 0.97
RFTN1-202ENST00000431547 CCND3P30281 292 aaPredicted RBP21.13■□□□□ 0.97
RFTN1-202ENST00000431547 CLK2P49760 499 aaKnown RBP21.13■□□□□ 0.97
RFTN1-202ENST00000431547 GALNT17Q6IS24 598 aa21.13■□□□□ 0.97
RFTN1-202ENST00000431547 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.13■□□□□ 0.97
RFTN1-202ENST00000431547 RNF208Q9H0X6 261 aa21.13■□□□□ 0.97
RFTN1-202ENST00000431547 PAK6Q9NQU5 681 aaPredicted RBP21.13■□□□□ 0.97
RFTN1-202ENST00000431547 PCDHA6Q9UN73 950 aa21.13■□□□□ 0.97
RFTN1-202ENST00000431547 PCDHA8Q9Y5H6 950 aa21.13■□□□□ 0.97
RFTN1-202ENST00000431547 DDX49Q9Y6V7 483 aaKnown RBP21.13■□□□□ 0.97
RFTN1-202ENST00000431547 MYCP01106 439 aaPredicted RBP21.12■□□□□ 0.97
RFTN1-202ENST00000431547 AP3B2Q13367 1082 aa21.12■□□□□ 0.97
RFTN1-202ENST00000431547 CUL4AQ13619 759 aa21.12■□□□□ 0.97
RFTN1-202ENST00000431547 PGM5Q15124 567 aa21.12■□□□□ 0.97
RFTN1-202ENST00000431547 STXBP2Q15833 593 aa21.12■□□□□ 0.97
RFTN1-202ENST00000431547 VSIG10LQ86VR7 867 aa21.12■□□□□ 0.97
RFTN1-202ENST00000431547 PHF20Q9BVI0 1012 aa21.12■□□□□ 0.97
RFTN1-202ENST00000431547 VTA1Q9NP79 307 aa21.12■□□□□ 0.97
RFTN1-202ENST00000431547 PCDHA4Q9UN74 947 aa21.12■□□□□ 0.97
RFTN1-202ENST00000431547 MYH6P13533 1939 aa21.12■□□□□ 0.97
RFTN1-202ENST00000431547 ZNFX1Q9P2E3 1918 aaKnown RBP21.12■□□□□ 0.97
RFTN1-202ENST00000431547 K7ELQ4 463 aaPredicted RBP21.11■□□□□ 0.97
RFTN1-202ENST00000431547 SEPT4O43236 478 aa21.11■□□□□ 0.97
RFTN1-202ENST00000431547 EIF3JO75822 258 aaKnown RBP21.11■□□□□ 0.97
RFTN1-202ENST00000431547 XRRA1Q6P2D8 792 aa21.11■□□□□ 0.97
RFTN1-202ENST00000431547 REXO1Q8N1G1 1221 aaKnown RBP21.11■□□□□ 0.97
RFTN1-202ENST00000431547 DAGLBQ8NCG7 672 aa21.11■□□□□ 0.97
RFTN1-202ENST00000431547 TMEM106CQ9BVX2 250 aa21.11■□□□□ 0.97
RFTN1-202ENST00000431547 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.11■□□□□ 0.97
RFTN1-202ENST00000431547 HTTP42858 3142 aa21.1■□□□□ 0.97
RFTN1-202ENST00000431547 ADAMTS3O15072 1205 aa21.1■□□□□ 0.97
RFTN1-202ENST00000431547 GJB1P08034 283 aa21.1■□□□□ 0.97
RFTN1-202ENST00000431547 CNGA1P29973 690 aa21.1■□□□□ 0.97
RFTN1-202ENST00000431547 CCND2P30279 289 aa21.1■□□□□ 0.97
RFTN1-202ENST00000431547 NPY5RQ15761 445 aa21.1■□□□□ 0.97
RFTN1-202ENST00000431547 TAPT1Q6NXT6 567 aa21.1■□□□□ 0.97
RFTN1-202ENST00000431547 BLIDQ8IZY5 108 aa21.1■□□□□ 0.97
RFTN1-202ENST00000431547 EHMT1Q9H9B1 1298 aa21.1■□□□□ 0.97
RFTN1-202ENST00000431547 GJB4Q9NTQ9 266 aa21.1■□□□□ 0.97
RFTN1-202ENST00000431547 TMEM260Q9NX78 707 aa21.1■□□□□ 0.97
RFTN1-202ENST00000431547 ZHX1Q9UKY1 873 aaPredicted RBP21.1■□□□□ 0.97
RFTN1-202ENST00000431547 FAM184BQ9ULE4 1060 aa21.1■□□□□ 0.97
RFTN1-202ENST00000431547 KCNJ14Q9UNX9 436 aa21.1■□□□□ 0.97
RFTN1-202ENST00000431547 MSCO60682 206 aa21.09■□□□□ 0.97
RFTN1-202ENST00000431547 STAM2O75886 525 aa21.09■□□□□ 0.97
RFTN1-202ENST00000431547 MYCLP12524 364 aaPredicted RBP21.09■□□□□ 0.97
RFTN1-202ENST00000431547 CCDC144BQ3MJ40 725 aa21.09■□□□□ 0.97
RFTN1-202ENST00000431547 JAKMIP3Q5VZ66 844 aa21.09■□□□□ 0.97
RFTN1-202ENST00000431547 PCNX4Q63HM2 1172 aa21.09■□□□□ 0.97
RFTN1-202ENST00000431547 EEPD1Q7L9B9 569 aa21.09■□□□□ 0.97
RFTN1-202ENST00000431547 FAM184AQ8NB25 1140 aa21.09■□□□□ 0.97
RFTN1-202ENST00000431547 IL31RAQ8NI17 732 aa21.09■□□□□ 0.97
RFTN1-202ENST00000431547 DDX20Q9UHI6 824 aaKnown RBP21.09■□□□□ 0.97
RFTN1-202ENST00000431547 RBBP6Q7Z6E9 1792 aaKnown RBP21.08■□□□□ 0.97
RFTN1-202ENST00000431547 RBM47A0AV96 593 aaKnown RBP21.08■□□□□ 0.97
RFTN1-202ENST00000431547 M0R2N6 131 aa21.08■□□□□ 0.97
RFTN1-202ENST00000431547 AKR1A1P14550 325 aa21.08■□□□□ 0.97
RFTN1-202ENST00000431547 CAPN2P17655 700 aa21.08■□□□□ 0.97
RFTN1-202ENST00000431547 TRIM29Q14134 588 aa21.08■□□□□ 0.97
RFTN1-202ENST00000431547 LHX8Q68G74 356 aa21.08■□□□□ 0.97
RFTN1-202ENST00000431547 IQSEC1Q6DN90 963 aa21.08■□□□□ 0.97
RFTN1-202ENST00000431547 FBXO16Q8IX29 292 aaPredicted RBP21.08■□□□□ 0.97
RFTN1-202ENST00000431547 DEFB118Q96PH6 123 aa21.08■□□□□ 0.97
RFTN1-202ENST00000431547 ANO3Q9BYT9 981 aa21.08■□□□□ 0.97
RFTN1-202ENST00000431547 PLXNA1Q9UIW2 1896 aa21.08■□□□□ 0.97
RFTN1-202ENST00000431547 KIF3AQ9Y496 699 aa21.08■□□□□ 0.97
RFTN1-202ENST00000431547 LCTP09848 1927 aa21.08■□□□□ 0.96
RFTN1-202ENST00000431547 SGPL1O95470 568 aa21.07■□□□□ 0.96
RFTN1-202ENST00000431547 SREBF1P36956 1147 aa21.07■□□□□ 0.96
RFTN1-202ENST00000431547 MRPS9P82933 396 aaKnown RBP21.07■□□□□ 0.96
RFTN1-202ENST00000431547 KRT40Q6A162 431 aa21.07■□□□□ 0.96
RFTN1-202ENST00000431547 HSCBQ8IWL3 235 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms