RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 COMMD3-BMI1R4GMX3 469 aa9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 SLIT3O75094 1523 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 PXDNLA1KZ92 1463 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 FAM237AA0A1B0GTK4 181 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 ENC1O14682 589 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 HOXD12P35452 270 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 LSAMPQ13449 338 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 FOXB2Q5VYV0 432 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 GET4Q7L5D6 327 aaPredicted RBP9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 TRPM8Q7Z2W7 1104 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 PIGWQ7Z7B1 504 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 CCDC65Q8IXS2 484 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 CFAP61Q8NHU2 1237 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 FBF1Q8TES7 1133 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 IFT74Q96LB3 600 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 MIS12Q9H081 205 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 BABAM1Q9NWV8 329 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 CROTQ9UKG9 612 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 ZNF148Q9UQR1 794 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 FRMD4BQ9Y2L6 1034 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 CAMTA1Q9Y6Y1 1673 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 GOLGA8AA7E2F4 631 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 SRGAP2O75044 1071 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 GLRX3O76003 335 aaKnown RBP9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 PRLRP16471 622 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 KRT9P35527 623 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 PEX5P50542 639 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 PSMC1P62191 440 aaKnown RBP9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 CCDC102BQ68D86 513 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 ZNF554Q86TJ5 538 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 IFT20Q8IY31 132 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 NOC3LQ8WTT2 800 aaKnown RBP9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.74□□□□□ -0.852e-6■■■■■ 54.4
CDC42BPA-206ENST00000429440 NECTIN2Q92692 538 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 FAM136AQ96C01 138 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 IQCDQ96DY2 449 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 CHMP6Q96FZ7 201 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 PUS3Q9BZE2 481 aaKnown RBP9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 SIL1Q9H173 461 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 CARD9Q9H257 536 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 POLD4Q9HCU8 107 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 DDX21Q9NR30 783 aaKnown RBP eCLIP9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 ARHGEF3Q9NR81 526 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 HELLSQ9NRZ9 838 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 NLRP2Q9NX02 1062 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 PDP2Q9P2J9 529 aa9.74□□□□□ -0.85
CDC42BPA-206ENST00000429440 ABCC12Q96J65 1359 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 BCL9O00512 1426 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 PNMA6EA0A0J9YXQ4 647 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 TMEM247A6NEH6 219 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 BIRC5O15392 142 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 HOXA10P31260 410 aaPredicted RBP9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 STIP1P31948 543 aaKnown RBP9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 MSH2P43246 934 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 SYKP43405 635 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 NCALDP61601 193 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 ERVK-24P63145 666 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 PPP2R2AP63151 447 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 PLOD1Q02809 727 aaPredicted RBP9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 C2orf54Q08AI8 447 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 KRT32Q14532 448 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 TBC1D9BQ66K14 1250 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 CCDC129Q6ZRS4 1044 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 DDX54Q8TDD1 881 aaKnown RBP9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 ATP8B4Q8TF62 1192 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 CTAGE1Q96RT6 745 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 LGR6Q9HBX8 967 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 RHBDL2Q9NX52 303 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 GUCA1BQ9UMX6 200 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 HPSEQ9Y251 543 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 EPN1Q9Y6I3 576 aaPredicted RBP9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 PXDNQ92626 1479 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 GCOM1H8Y6P7 765 aaPredicted RBP9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 HIP1O00291 1037 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 ATP9BO43861 1147 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 CAPN15O75808 1086 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 PDHA1P08559 390 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 MYZAPP0CAP1 466 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 CALB2P22676 271 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 CD97P48960 835 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 KCNJ2P63252 427 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 AGBL2Q5U5Z8 902 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 APTXQ7Z2E3 356 aaKnown RBP9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 CXorf38Q8TB03 319 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 WDR60Q8WVS4 1066 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 HIC2Q96JB3 615 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 CNOT10Q9H9A5 744 aaKnown RBP9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 PLCB1Q9NQ66 1216 aa9.73□□□□□ -0.85
CDC42BPA-206ENST00000429440 XBP1P17861 261 aa9.72□□□□□ -0.85
CDC42BPA-206ENST00000429440 HPDP32754 393 aaPredicted RBP9.72□□□□□ -0.85
CDC42BPA-206ENST00000429440 PDE4BQ07343 736 aa9.72□□□□□ -0.85
CDC42BPA-206ENST00000429440 MCL1Q07820 350 aa9.72□□□□□ -0.85
CDC42BPA-206ENST00000429440 TRIM14Q14142 442 aa9.72□□□□□ -0.85
CDC42BPA-206ENST00000429440 ESCO1Q5FWF5 840 aa9.72□□□□□ -0.85
CDC42BPA-206ENST00000429440 SAPCD2Q86UD0 394 aa9.72□□□□□ -0.85
CDC42BPA-206ENST00000429440 CREG2Q8IUH2 290 aa9.72□□□□□ -0.85
CDC42BPA-206ENST00000429440 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.72□□□□□ -0.85
CDC42BPA-206ENST00000429440 SPATA4Q8NEY3 305 aa9.72□□□□□ -0.85
CDC42BPA-206ENST00000429440 LRRC59Q96AG4 307 aaKnown RBP9.72□□□□□ -0.85
CDC42BPA-206ENST00000429440 ORAI2Q96SN7 254 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms