RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 SDSP20132 328 aa19.42■□□□□ 0.7
VARS-216ENST00000428445 ASB2Q96Q27 587 aa19.42■□□□□ 0.7
VARS-216ENST00000428445 TAAR1Q96RJ0 339 aa19.42■□□□□ 0.7
VARS-216ENST00000428445 COL20A1Q9P218 1284 aa19.42■□□□□ 0.7
VARS-216ENST00000428445 THEGQ9P2T0 379 aa19.42■□□□□ 0.7
VARS-216ENST00000428445 TNFRSF10AO00220 468 aa19.41■□□□□ 0.7
VARS-216ENST00000428445 ARHGEF15O94989 841 aa19.41■□□□□ 0.7
VARS-216ENST00000428445 LY6KQ17RY6 165 aa19.41■□□□□ 0.7
VARS-216ENST00000428445 SEPT14Q6ZU15 432 aa19.41■□□□□ 0.7
VARS-216ENST00000428445 PCDHA11Q9Y5I1 949 aa19.41■□□□□ 0.7
VARS-216ENST00000428445 XIRP2A4UGR9 3374 aa19.41■□□□□ 0.7
VARS-216ENST00000428445 EPOPA6NHQ4 379 aa19.4■□□□□ 0.7
VARS-216ENST00000428445 A6NJR5 290 aa19.4■□□□□ 0.7
VARS-216ENST00000428445 CA3P07451 260 aa19.4■□□□□ 0.7
VARS-216ENST00000428445 IQCF3P0C7M6 154 aa19.4■□□□□ 0.7
VARS-216ENST00000428445 KRT40Q6A162 431 aa19.4■□□□□ 0.7
VARS-216ENST00000428445 CWC27Q6UX04 472 aaKnown RBP19.4■□□□□ 0.7
VARS-216ENST00000428445 CHST3Q7LGC8 479 aa19.4■□□□□ 0.7
VARS-216ENST00000428445 DNERQ8NFT8 737 aa19.4■□□□□ 0.7
VARS-216ENST00000428445 SCFD2Q8WU76 684 aa19.4■□□□□ 0.7
VARS-216ENST00000428445 AFG1LQ8WV93 481 aa19.4■□□□□ 0.7
VARS-216ENST00000428445 ATXN2LQ8WWM7 1075 aaKnown RBP19.4■□□□□ 0.7
VARS-216ENST00000428445 VAT1LQ9HCJ6 419 aa19.4■□□□□ 0.7
VARS-216ENST00000428445 RAPGEFL1Q9UHV5 662 aa19.4■□□□□ 0.7
VARS-216ENST00000428445 ZMYM6O95789 1325 aa19.4■□□□□ 0.7
VARS-216ENST00000428445 LOC102724159A0A0B4J2E5 919 aa19.39■□□□□ 0.69
VARS-216ENST00000428445 B4E1Z4 1266 aa19.39■□□□□ 0.69
VARS-216ENST00000428445 ZNF213O14771 459 aa19.39■□□□□ 0.69
VARS-216ENST00000428445 KDM4AO75164 1064 aa19.39■□□□□ 0.69
VARS-216ENST00000428445 IGHDP01880 384 aa19.39■□□□□ 0.69
VARS-216ENST00000428445 TFF2Q03403 129 aa19.39■□□□□ 0.69
VARS-216ENST00000428445 AAMPQ13685 434 aa19.39■□□□□ 0.69
VARS-216ENST00000428445 PWP2Q15269 919 aaKnown RBP19.39■□□□□ 0.69
VARS-216ENST00000428445 CDC37Q16543 378 aaPredicted RBP19.39■□□□□ 0.69
VARS-216ENST00000428445 SPRED2Q7Z698 418 aa19.39■□□□□ 0.69
VARS-216ENST00000428445 ADGRF4Q8IZF3 695 aa19.39■□□□□ 0.69
VARS-216ENST00000428445 ESR2Q92731 530 aa19.39■□□□□ 0.69
VARS-216ENST00000428445 NECAB3Q96P71 396 aaPredicted RBP19.39■□□□□ 0.69
VARS-216ENST00000428445 FTOQ9C0B1 505 aaKnown RBP eCLIP19.39■□□□□ 0.69
VARS-216ENST00000428445 WDR19Q8NEZ3 1342 aa19.39■□□□□ 0.69
VARS-216ENST00000428445 NKRFO15226 690 aaKnown RBP eCLIP19.38■□□□□ 0.69
VARS-216ENST00000428445 MYH6P13533 1939 aa19.38■□□□□ 0.69
VARS-216ENST00000428445 MRPS5P82675 430 aaKnown RBP19.38■□□□□ 0.69
VARS-216ENST00000428445 TMEM67Q5HYA8 995 aa19.38■□□□□ 0.69
VARS-216ENST00000428445 PRRC2BQ5JSZ5 2229 aaKnown RBP19.38■□□□□ 0.69
VARS-216ENST00000428445 NFRKBQ6P4R8 1299 aa19.38■□□□□ 0.69
VARS-216ENST00000428445 CCDC62Q6P9F0 684 aa19.38■□□□□ 0.69
VARS-216ENST00000428445 TMCO2Q7Z6W1 182 aaPredicted RBP19.38■□□□□ 0.69
VARS-216ENST00000428445 PLEKHM2Q8IWE5 1019 aa19.38■□□□□ 0.69
VARS-216ENST00000428445 RETREG2Q8NC44 543 aa19.38■□□□□ 0.69
VARS-216ENST00000428445 PNMA1Q8ND90 353 aa19.38■□□□□ 0.69
VARS-216ENST00000428445 SYTL5Q8TDW5 730 aaPredicted RBP19.38■□□□□ 0.69
VARS-216ENST00000428445 ADAMTS19Q8TE59 1207 aa19.38■□□□□ 0.69
VARS-216ENST00000428445 GPNMBQ14956 572 aa19.37■□□□□ 0.69
VARS-216ENST00000428445 BRDTQ58F21 947 aaPredicted RBP19.37■□□□□ 0.69
VARS-216ENST00000428445 GPATCH4Q5T3I0 446 aaKnown RBP19.37■□□□□ 0.69
VARS-216ENST00000428445 GDF6Q6KF10 455 aaPredicted RBP19.37■□□□□ 0.69
VARS-216ENST00000428445 DGKHQ86XP1 1220 aa19.37■□□□□ 0.69
VARS-216ENST00000428445 CTAGE1Q96RT6 745 aa19.37■□□□□ 0.69
VARS-216ENST00000428445 RNF41Q9H4P4 317 aaPredicted RBP19.37■□□□□ 0.69
VARS-216ENST00000428445 ZSWIM5Q9P217 1185 aa19.37■□□□□ 0.69
VARS-216ENST00000428445 MYH7BA7E2Y1 1941 aa19.37■□□□□ 0.69
VARS-216ENST00000428445 PTPRSQ13332 1948 aa19.37■□□□□ 0.69
VARS-216ENST00000428445 RAD50Q92878 1312 aa19.36■□□□□ 0.69
VARS-216ENST00000428445 KIAA1217Q5T5P2 1943 aa19.36■□□□□ 0.69
VARS-216ENST00000428445 SORBS3O60504 671 aa19.36■□□□□ 0.69
VARS-216ENST00000428445 PFKMP08237 780 aa19.36■□□□□ 0.69
VARS-216ENST00000428445 MMP3P08254 477 aa19.36■□□□□ 0.69
VARS-216ENST00000428445 ARHGAP1Q07960 439 aa19.36■□□□□ 0.69
VARS-216ENST00000428445 PTGISQ16647 500 aa19.36■□□□□ 0.69
VARS-216ENST00000428445 QRICH1Q2TAL8 776 aa19.36■□□□□ 0.69
VARS-216ENST00000428445 RGS22Q8NE09 1264 aa19.36■□□□□ 0.69
VARS-216ENST00000428445 KAT2BQ92831 832 aa19.36■□□□□ 0.69
VARS-216ENST00000428445 MPHOSPH6Q99547 160 aaKnown RBP19.36■□□□□ 0.69
VARS-216ENST00000428445 KAT14Q9H8E8 782 aa19.36■□□□□ 0.69
VARS-216ENST00000428445 NOD1Q9Y239 953 aa19.36■□□□□ 0.69
VARS-216ENST00000428445 TANC1Q9C0D5 1861 aa19.35■□□□□ 0.69
VARS-216ENST00000428445 DHX16O60231 1041 aaKnown RBP19.35■□□□□ 0.69
VARS-216ENST00000428445 KPNA6O60684 536 aa19.35■□□□□ 0.69
VARS-216ENST00000428445 PCP11498 1178 aaKnown RBP19.35■□□□□ 0.69
VARS-216ENST00000428445 ACTN1P12814 892 aa19.35■□□□□ 0.69
VARS-216ENST00000428445 EIF2AK2P19525 551 aaKnown RBP19.35■□□□□ 0.69
VARS-216ENST00000428445 SKIV2LQ15477 1246 aaKnown RBP19.35■□□□□ 0.69
VARS-216ENST00000428445 TCTN1Q2MV58 587 aa19.35■□□□□ 0.69
VARS-216ENST00000428445 CHD1LQ86WJ1 897 aa19.35■□□□□ 0.69
VARS-216ENST00000428445 SMC5Q8IY18 1101 aa19.35■□□□□ 0.69
VARS-216ENST00000428445 STAG2Q8N3U4 1231 aa19.35■□□□□ 0.69
VARS-216ENST00000428445 ENAHQ8N8S7 591 aaPredicted RBP19.35■□□□□ 0.69
VARS-216ENST00000428445 ARNTL2Q8WYA1 636 aa19.35■□□□□ 0.69
VARS-216ENST00000428445 DHX38Q92620 1227 aaKnown RBP19.35■□□□□ 0.69
VARS-216ENST00000428445 ZFP91Q96JP5 570 aaPredicted RBP19.35■□□□□ 0.69
VARS-216ENST00000428445 ZSCAN10Q96SZ4 725 aaPredicted RBP19.35■□□□□ 0.69
VARS-216ENST00000428445 UHRF1Q96T88 793 aaPredicted RBP19.35■□□□□ 0.69
VARS-216ENST00000428445 RMDN3Q96TC7 470 aa19.35■□□□□ 0.69
VARS-216ENST00000428445 JMJD4Q9H9V9 463 aa19.35■□□□□ 0.69
VARS-216ENST00000428445 PNMA2Q9UL42 364 aa19.35■□□□□ 0.69
VARS-216ENST00000428445 MTCH2Q9Y6C9 303 aa19.35■□□□□ 0.69
VARS-216ENST00000428445 ABCB11O95342 1321 aa19.34■□□□□ 0.69
VARS-216ENST00000428445 TRANK1O15050 2925 aa19.34■□□□□ 0.69
VARS-216ENST00000428445 GH1P01241 217 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms