RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 CNPY2Q9Y2B0 182 aa17.35■□□□□ 0.37
VARS2-203ENST00000428017 ZSWIM8A7E2V4 1837 aa17.35■□□□□ 0.37
VARS2-203ENST00000428017 H3BQV1 296 aa17.34■□□□□ 0.37
VARS2-203ENST00000428017 EIF2AK2P19525 551 aaKnown RBP17.34■□□□□ 0.37
VARS2-203ENST00000428017 IFFO2Q5TF58 517 aa17.34■□□□□ 0.37
VARS2-203ENST00000428017 JAKMIP3Q5VZ66 844 aa17.34■□□□□ 0.37
VARS2-203ENST00000428017 KRT40Q6A162 431 aa17.34■□□□□ 0.37
VARS2-203ENST00000428017 BLIDQ8IZY5 108 aa17.34■□□□□ 0.37
VARS2-203ENST00000428017 TRIB2Q92519 343 aa17.34■□□□□ 0.37
VARS2-203ENST00000428017 IWS1Q96ST2 819 aa17.34■□□□□ 0.37
VARS2-203ENST00000428017 PXMP2Q9NR77 195 aa17.34■□□□□ 0.37
VARS2-203ENST00000428017 FLRT1Q9NZU1 646 aa17.34■□□□□ 0.37
VARS2-203ENST00000428017 CASP8AP2Q9UKL3 1982 aa17.34■□□□□ 0.37
VARS2-203ENST00000428017 ZNF236Q9UL36 1845 aa17.34■□□□□ 0.37
VARS2-203ENST00000428017 PCDHA6Q9UN73 950 aa17.34■□□□□ 0.37
VARS2-203ENST00000428017 PCDHA8Q9Y5H6 950 aa17.34■□□□□ 0.37
VARS2-203ENST00000428017 PLXNB2O15031 1838 aa17.33■□□□□ 0.37
VARS2-203ENST00000428017 SYNGAP1Q96PV0 1343 aa17.33■□□□□ 0.36
VARS2-203ENST00000428017 MMP1P03956 469 aa17.33■□□□□ 0.36
VARS2-203ENST00000428017 PDCP20941 246 aa17.33■□□□□ 0.36
VARS2-203ENST00000428017 CYP2C19P33261 490 aa17.33■□□□□ 0.36
VARS2-203ENST00000428017 KRT2P35908 639 aa17.33■□□□□ 0.36
VARS2-203ENST00000428017 UBXN2AP68543 259 aa17.33■□□□□ 0.36
VARS2-203ENST00000428017 GNL2Q13823 731 aaKnown RBP17.33■□□□□ 0.36
VARS2-203ENST00000428017 MAMDC4Q6UXC1 1216 aa17.33■□□□□ 0.36
VARS2-203ENST00000428017 ARMCX2Q7L311 632 aa17.33■□□□□ 0.36
VARS2-203ENST00000428017 DAGLBQ8NCG7 672 aa17.33■□□□□ 0.36
VARS2-203ENST00000428017 SH3TC2Q8TF17 1288 aa17.33■□□□□ 0.36
VARS2-203ENST00000428017 MCOLN1Q9GZU1 580 aa17.33■□□□□ 0.36
VARS2-203ENST00000428017 GJB4Q9NTQ9 266 aa17.33■□□□□ 0.36
VARS2-203ENST00000428017 TMEM260Q9NX78 707 aa17.33■□□□□ 0.36
VARS2-203ENST00000428017 DAXXQ9UER7 740 aaPredicted RBP17.33■□□□□ 0.36
VARS2-203ENST00000428017 MGAMO43451 1857 aa17.33■□□□□ 0.36
VARS2-203ENST00000428017 MYH6P13533 1939 aa17.32■□□□□ 0.36
VARS2-203ENST00000428017 INHAP05111 366 aa17.32■□□□□ 0.36
VARS2-203ENST00000428017 MYCLP12524 364 aaPredicted RBP17.32■□□□□ 0.36
VARS2-203ENST00000428017 CCND2P30279 289 aa17.32■□□□□ 0.36
VARS2-203ENST00000428017 GUCY1B3Q02153 619 aa17.32■□□□□ 0.36
VARS2-203ENST00000428017 STXBP2Q15833 593 aa17.32■□□□□ 0.36
VARS2-203ENST00000428017 LARP1BQ659C4 914 aaKnown RBP17.32■□□□□ 0.36
VARS2-203ENST00000428017 FBXO18Q8NFZ0 1043 aa17.32■□□□□ 0.36
VARS2-203ENST00000428017 SHISA4Q96DD7 197 aa17.32■□□□□ 0.36
VARS2-203ENST00000428017 FGD4Q96M96 766 aa17.32■□□□□ 0.36
VARS2-203ENST00000428017 PDCD2LQ9BRP1 358 aa17.32■□□□□ 0.36
VARS2-203ENST00000428017 ANO3Q9BYT9 981 aa17.32■□□□□ 0.36
VARS2-203ENST00000428017 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.32■□□□□ 0.36
VARS2-203ENST00000428017 CCDC194A0A1B0GVG4 234 aa17.31■□□□□ 0.36
VARS2-203ENST00000428017 NR3C2P08235 984 aa17.31■□□□□ 0.36
VARS2-203ENST00000428017 PRKAR2AP13861 404 aaKnown RBP17.31■□□□□ 0.36
VARS2-203ENST00000428017 CLK2P49760 499 aaKnown RBP17.31■□□□□ 0.36
VARS2-203ENST00000428017 KRT25Q7Z3Z0 450 aa17.31■□□□□ 0.36
VARS2-203ENST00000428017 DIS3L2Q8IYB7 885 aaKnown RBP17.31■□□□□ 0.36
VARS2-203ENST00000428017 SPRYD3Q8NCJ5 442 aa17.31■□□□□ 0.36
VARS2-203ENST00000428017 RASGRP4Q8TDF6 673 aa17.31■□□□□ 0.36
VARS2-203ENST00000428017 PGBD1Q96JS3 809 aa17.31■□□□□ 0.36
VARS2-203ENST00000428017 ABHD16BQ9H3Z7 469 aa17.31■□□□□ 0.36
VARS2-203ENST00000428017 NRBP1Q9UHY1 535 aa17.31■□□□□ 0.36
VARS2-203ENST00000428017 ASTN1O14525 1302 aa17.3■□□□□ 0.36
VARS2-203ENST00000428017 CNGA1P29973 690 aa17.3■□□□□ 0.36
VARS2-203ENST00000428017 PGM5Q15124 567 aa17.3■□□□□ 0.36
VARS2-203ENST00000428017 XRRA1Q6P2D8 792 aa17.3■□□□□ 0.36
VARS2-203ENST00000428017 ZHX1Q9UKY1 873 aaPredicted RBP17.3■□□□□ 0.36
VARS2-203ENST00000428017 RPTORQ8N122 1335 aa17.29■□□□□ 0.36
VARS2-203ENST00000428017 EIF3JO75822 258 aaKnown RBP17.29■□□□□ 0.36
VARS2-203ENST00000428017 STAM2O75886 525 aa17.29■□□□□ 0.36
VARS2-203ENST00000428017 SNAI1O95863 264 aaPredicted RBP17.29■□□□□ 0.36
VARS2-203ENST00000428017 EDNRBP24530 442 aa17.29■□□□□ 0.36
VARS2-203ENST00000428017 ZNF76P36508 570 aa17.29■□□□□ 0.36
VARS2-203ENST00000428017 CACNB2Q08289 660 aaPredicted RBP17.29■□□□□ 0.36
VARS2-203ENST00000428017 ACVR2BQ13705 512 aa17.29■□□□□ 0.36
VARS2-203ENST00000428017 NONOQ15233 471 aaKnown RBP eCLIP17.29■□□□□ 0.36
VARS2-203ENST00000428017 PCNX4Q63HM2 1172 aa17.29■□□□□ 0.36
VARS2-203ENST00000428017 EEPD1Q7L9B9 569 aa17.29■□□□□ 0.36
VARS2-203ENST00000428017 MORC4Q8TE76 937 aa17.29■□□□□ 0.36
VARS2-203ENST00000428017 VTA1Q9NP79 307 aa17.29■□□□□ 0.36
VARS2-203ENST00000428017 FRMPD4Q14CM0 1322 aa17.28■□□□□ 0.36
VARS2-203ENST00000428017 BTBD18B2RXH4 712 aa17.28■□□□□ 0.36
VARS2-203ENST00000428017 SREBF1P36956 1147 aa17.28■□□□□ 0.36
VARS2-203ENST00000428017 TRIM32Q13049 653 aa17.28■□□□□ 0.36
VARS2-203ENST00000428017 NPY5RQ15761 445 aa17.28■□□□□ 0.36
VARS2-203ENST00000428017 GNPTABQ3T906 1256 aa17.28■□□□□ 0.36
VARS2-203ENST00000428017 PRAMEF19Q5SWL8 479 aa17.28■□□□□ 0.36
VARS2-203ENST00000428017 MCTP1Q6DN14 999 aa17.28■□□□□ 0.36
VARS2-203ENST00000428017 PIK3AP1Q6ZUJ8 805 aa17.28■□□□□ 0.36
VARS2-203ENST00000428017 VSIG10LQ86VR7 867 aa17.28■□□□□ 0.36
VARS2-203ENST00000428017 IL31RAQ8NI17 732 aa17.28■□□□□ 0.36
VARS2-203ENST00000428017 OXER1Q8TDS5 423 aa17.28■□□□□ 0.36
VARS2-203ENST00000428017 HMX1Q9NP08 348 aaPredicted RBP17.28■□□□□ 0.36
VARS2-203ENST00000428017 DDX49Q9Y6V7 483 aaKnown RBP17.28■□□□□ 0.36
VARS2-203ENST00000428017 RBBP6Q7Z6E9 1792 aaKnown RBP17.28■□□□□ 0.36
VARS2-203ENST00000428017 VPS37CA5D8V6 355 aaPredicted RBP17.27■□□□□ 0.36
VARS2-203ENST00000428017 ADAMTS3O15072 1205 aa17.27■□□□□ 0.36
VARS2-203ENST00000428017 MYCP01106 439 aaPredicted RBP17.27■□□□□ 0.36
VARS2-203ENST00000428017 IGHA2P01877 340 aa17.27■□□□□ 0.36
VARS2-203ENST00000428017 ARHGAP4P98171 946 aa17.27■□□□□ 0.36
VARS2-203ENST00000428017 NR5A1Q13285 461 aa17.27■□□□□ 0.36
VARS2-203ENST00000428017 COL13A1Q5TAT6 717 aaPredicted RBP17.27■□□□□ 0.36
VARS2-203ENST00000428017 SEPT14Q6ZU15 432 aa17.27■□□□□ 0.36
VARS2-203ENST00000428017 FBXO16Q8IX29 292 aaPredicted RBP17.27■□□□□ 0.36
VARS2-203ENST00000428017 ARMC5Q96C12 935 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms