RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 COG7P83436 770 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 BFSP1Q12934 665 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 ZBTB17Q13105 803 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 NAA25Q14CX7 972 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 MAP3K21Q5TCX8 1036 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 ATL3Q6DD88 541 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 HAUS6Q7Z4H7 955 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 RFX6Q8HWS3 928 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 C16orf45Q96MC5 204 aaPredicted RBP6.24□□□□□ -1.41
HERC4-206ENST00000427635 ZNF341Q9BYN7 854 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 RABEP2Q9H5N1 569 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 INPP5FQ9Y2H2 1132 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 ITSN2Q9NZM3 1697 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 PHLPP2Q6ZVD8 1323 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 PSDA5PKW4 1024 aaPredicted RBP6.23□□□□□ -1.41
HERC4-206ENST00000427635 CYBBP04839 570 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 DLATP10515 647 aaKnown RBP6.23□□□□□ -1.41
HERC4-206ENST00000427635 DRP2Q13474 957 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 KIAA1755Q5JYT7 1200 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 SFMBT2Q5VUG0 894 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 CREB3L3Q68CJ9 461 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 CTAGE3PQ8IX95 158 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 CCDC105Q8IYK2 499 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 MMP19Q99542 508 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 AMNQ9BXJ7 453 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 RPF1Q9H9Y2 349 aaKnown RBP6.23□□□□□ -1.41
HERC4-206ENST00000427635 KIAA1522Q9P206 1035 aaPredicted RBP6.23□□□□□ -1.41
HERC4-206ENST00000427635 BDNFP23560 247 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 GNL1P36915 607 aaPredicted RBP6.23□□□□□ -1.41
HERC4-206ENST00000427635 PAK1Q13153 545 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 CCDC38Q502W7 563 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 USPL1Q5W0Q7 1092 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 ANO1Q5XXA6 986 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 C16orf87Q6PH81 154 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 LRRC47Q8N1G4 583 aaKnown RBP6.23□□□□□ -1.41
HERC4-206ENST00000427635 FAM81BQ96LP2 452 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 ZNF577Q9BSK1 485 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 UBAP1Q9NZ09 502 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 HACD3Q9P035 362 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 CCDC85CA6NKD9 419 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 H7C0C1 242 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 ADCY5O95622 1261 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 TTC4O95801 387 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 TUBB4AP04350 444 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 ATP5OP48047 213 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 ST8SIA6P61647 398 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 ARHGAP4P98171 946 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 IL1RL1Q01638 556 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 RAD51AP2Q09MP3 1159 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 GTF2H3Q13889 308 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 ACCSLQ4AC99 568 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 IRAK1BP1Q5VVH5 260 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 ARMC6Q6NXE6 501 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 DNAJC10Q8IXB1 793 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 ARHGAP45Q92619 1136 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 LRGUKQ96M69 825 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 DNAJC7Q99615 494 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 FBXO2Q9UK22 296 aaPredicted RBP6.23□□□□□ -1.41
HERC4-206ENST00000427635 PCDHB8Q9UN66 801 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 BBOX1O75936 387 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 KRT15P19012 456 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 MCM4P33991 863 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 ARL4AP40617 200 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 ZNF157P51786 506 aaPredicted RBP6.23□□□□□ -1.41
HERC4-206ENST00000427635 MMEL1Q495T6 779 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 TNNI3KQ59H18 835 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 FAM47AQ5JRC9 791 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 SEPT12Q8IYM1 358 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 SNX19Q92543 992 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 SH3KBP1Q96B97 665 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 MASTLQ96GX5 879 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 SPACA7Q96KW9 195 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 KIF2CQ99661 725 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 ZFYVE9O95405 1425 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 AKR1B15C9JRZ8 316 aaPredicted RBP6.23□□□□□ -1.41
HERC4-206ENST00000427635 TRIM27P14373 513 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 IRX4P78413 519 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 E2F4Q16254 413 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 BTBD8Q5XKL5 378 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 PPP1R2P3Q6NXS1 205 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 TBC1D9Q6ZT07 1266 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 MCUR1Q96AQ8 359 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 KMT5AQ9NQR1 393 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 MRGBPQ9NV56 204 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 EVA1BQ9NVM1 165 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 SYNPO2Q9UMS6 1093 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 TNNQ9UQP3 1299 aa6.23□□□□□ -1.41
HERC4-206ENST00000427635 GPAA1O43292 621 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 SRGAP2CP0DJJ0 459 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 PEX19P40855 299 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 PPARAQ07869 468 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 MYSM1Q5VVJ2 828 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 FRA10AC1Q70Z53 315 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 RUFY3Q7L099 469 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 SZRD1Q7Z422 152 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 ADAT2Q7Z6V5 191 aaKnown RBP6.22□□□□□ -1.41
HERC4-206ENST00000427635 FAM160B2Q86V87 743 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 UNC5CLQ8IV45 518 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 AFG1LQ8WV93 481 aa6.22□□□□□ -1.41
HERC4-206ENST00000427635 CCDC124Q96CT7 223 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms