RNA–Protein interactions for RNA: ENST00000425345.1

EPDR1-203, Transcript of ependymin related 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPDR1, Length 947 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPDR1-203ENST00000425345 PRDM5Q9NQX1 630 aaPredicted RBP17.28■□□□□ 0.36
EPDR1-203ENST00000425345 TMEM39AQ9NV64 488 aa17.28■□□□□ 0.36
EPDR1-203ENST00000425345 POLR3EQ9NVU0 708 aa17.28■□□□□ 0.36
EPDR1-203ENST00000425345 LTBP2Q14767 1821 aa17.28■□□□□ 0.36
EPDR1-203ENST00000425345 TLR3O15455 904 aaKnown RBP17.27■□□□□ 0.36
EPDR1-203ENST00000425345 PRC1O43663 620 aa17.27■□□□□ 0.36
EPDR1-203ENST00000425345 EIF3JO75822 258 aaKnown RBP17.27■□□□□ 0.36
EPDR1-203ENST00000425345 KRT32Q14532 448 aa17.27■□□□□ 0.36
EPDR1-203ENST00000425345 KCNV1Q6PIU1 500 aa17.27■□□□□ 0.36
EPDR1-203ENST00000425345 SGMS1Q86VZ5 419 aa17.27■□□□□ 0.36
EPDR1-203ENST00000425345 TEX2Q8IWB9 1127 aa17.27■□□□□ 0.36
EPDR1-203ENST00000425345 VTI1AQ96AJ9 217 aa17.27■□□□□ 0.36
EPDR1-203ENST00000425345 TBX21Q9UL17 535 aa17.27■□□□□ 0.36
EPDR1-203ENST00000425345 A6NJR5 290 aa17.26■□□□□ 0.35
EPDR1-203ENST00000425345 SH2B2O14492 632 aaPredicted RBP17.26■□□□□ 0.35
EPDR1-203ENST00000425345 TIMP1P01033 207 aa17.26■□□□□ 0.35
EPDR1-203ENST00000425345 RAG1P15918 1043 aa17.26■□□□□ 0.35
EPDR1-203ENST00000425345 CCDC62Q6P9F0 684 aa17.26■□□□□ 0.35
EPDR1-203ENST00000425345 CXCL17Q6UXB2 119 aa17.26■□□□□ 0.35
EPDR1-203ENST00000425345 FAM126BQ8IXS8 530 aa17.26■□□□□ 0.35
EPDR1-203ENST00000425345 ZNF654Q8IZM8 581 aa17.26■□□□□ 0.35
EPDR1-203ENST00000425345 BADQ92934 168 aa17.26■□□□□ 0.35
EPDR1-203ENST00000425345 CCDC69A6NI79 296 aa17.25■□□□□ 0.35
EPDR1-203ENST00000425345 OPLAHO14841 1288 aa17.25■□□□□ 0.35
EPDR1-203ENST00000425345 CYTH3O43739 400 aa17.25■□□□□ 0.35
EPDR1-203ENST00000425345 PPP1R11O60927 126 aaPredicted RBP17.25■□□□□ 0.35
EPDR1-203ENST00000425345 CD4P01730 458 aa17.25■□□□□ 0.35
EPDR1-203ENST00000425345 HMGB1P09429 215 aaKnown RBP17.25■□□□□ 0.35
EPDR1-203ENST00000425345 TXNP10599 105 aaKnown RBP17.25■□□□□ 0.35
EPDR1-203ENST00000425345 BEX3Q00994 111 aa17.25■□□□□ 0.35
EPDR1-203ENST00000425345 ITGA7Q13683 1181 aa17.25■□□□□ 0.35
EPDR1-203ENST00000425345 ARHGEF16Q5VV41 709 aa17.25■□□□□ 0.35
EPDR1-203ENST00000425345 ERICH6BQ5W0A0 696 aa17.25■□□□□ 0.35
EPDR1-203ENST00000425345 CHST3Q7LGC8 479 aa17.25■□□□□ 0.35
EPDR1-203ENST00000425345 SH3RF1Q7Z6J0 888 aa17.25■□□□□ 0.35
EPDR1-203ENST00000425345 TBC1D5Q92609 795 aa17.25■□□□□ 0.35
EPDR1-203ENST00000425345 EMID1Q96A84 441 aaPredicted RBP17.25■□□□□ 0.35
EPDR1-203ENST00000425345 TAAR1Q96RJ0 339 aa17.25■□□□□ 0.35
EPDR1-203ENST00000425345 SENP2Q9HC62 589 aa17.25■□□□□ 0.35
EPDR1-203ENST00000425345 PXMP2Q9NR77 195 aa17.25■□□□□ 0.35
EPDR1-203ENST00000425345 COL20A1Q9P218 1284 aa17.25■□□□□ 0.35
EPDR1-203ENST00000425345 BAZ2BQ9UIF8 2168 aaKnown RBP17.25■□□□□ 0.35
EPDR1-203ENST00000425345 GCOM1H8Y6P7 765 aaPredicted RBP17.24■□□□□ 0.35
EPDR1-203ENST00000425345 EPB41L2O43491 1005 aaKnown RBP17.24■□□□□ 0.35
EPDR1-203ENST00000425345 STAM2O75886 525 aa17.24■□□□□ 0.35
EPDR1-203ENST00000425345 CFBP00751 764 aa17.24■□□□□ 0.35
EPDR1-203ENST00000425345 NR3C2P08235 984 aa17.24■□□□□ 0.35
EPDR1-203ENST00000425345 POLR2MP0CAP2 368 aa17.24■□□□□ 0.35
EPDR1-203ENST00000425345 TGFB3P10600 412 aa17.24■□□□□ 0.35
EPDR1-203ENST00000425345 PURAQ00577 322 aaKnown RBP17.24■□□□□ 0.35
EPDR1-203ENST00000425345 SLC35G1Q2M3R5 365 aa17.24■□□□□ 0.35
EPDR1-203ENST00000425345 FAM109BQ6ICB4 259 aaPredicted RBP17.24■□□□□ 0.35
EPDR1-203ENST00000425345 MFSD5Q6N075 450 aa17.24■□□□□ 0.35
EPDR1-203ENST00000425345 RRP36Q96EU6 259 aaKnown RBP17.24■□□□□ 0.35
EPDR1-203ENST00000425345 PIGSQ96S52 555 aa17.24■□□□□ 0.35
EPDR1-203ENST00000425345 MTG1Q9BT17 334 aaPredicted RBP17.24■□□□□ 0.35
EPDR1-203ENST00000425345 GPHNQ9NQX3 736 aaPredicted RBP17.24■□□□□ 0.35
EPDR1-203ENST00000425345 SLC12A7Q9Y666 1083 aa17.24■□□□□ 0.35
EPDR1-203ENST00000425345 DDX49Q9Y6V7 483 aaKnown RBP17.24■□□□□ 0.35
EPDR1-203ENST00000425345 SOX1O00570 391 aaPredicted RBP17.23■□□□□ 0.35
EPDR1-203ENST00000425345 NEFLP07196 543 aa17.23■□□□□ 0.35
EPDR1-203ENST00000425345 SUPT20HL2P0C7V6 817 aa17.23■□□□□ 0.35
EPDR1-203ENST00000425345 RCAN1P53805 252 aa17.23■□□□□ 0.35
EPDR1-203ENST00000425345 IRX5P78411 483 aaPredicted RBP17.23■□□□□ 0.35
EPDR1-203ENST00000425345 FPGSQ05932 587 aa17.23■□□□□ 0.35
EPDR1-203ENST00000425345 PTPN11Q06124 597 aaPredicted RBP17.23■□□□□ 0.35
EPDR1-203ENST00000425345 NFXL1Q6ZNB6 911 aa17.23■□□□□ 0.35
EPDR1-203ENST00000425345 VSIG10LQ86VR7 867 aa17.23■□□□□ 0.35
EPDR1-203ENST00000425345 HOMER1Q86YM7 354 aa17.23■□□□□ 0.35
EPDR1-203ENST00000425345 OR6J1Q8NGC5 347 aa17.23■□□□□ 0.35
EPDR1-203ENST00000425345 NEK1Q96PY6 1258 aa17.23■□□□□ 0.35
EPDR1-203ENST00000425345 SEC63Q9UGP8 760 aaKnown RBP17.23■□□□□ 0.35
EPDR1-203ENST00000425345 PIK3CDO00329 1044 aa17.22■□□□□ 0.35
EPDR1-203ENST00000425345 PPIGQ13427 754 aaKnown RBP eCLIP17.22■□□□□ 0.35
EPDR1-203ENST00000425345 XRRA1Q6P2D8 792 aa17.22■□□□□ 0.35
EPDR1-203ENST00000425345 NFRKBQ6P4R8 1299 aa17.22■□□□□ 0.35
EPDR1-203ENST00000425345 SYNE3Q6ZMZ3 975 aa17.22■□□□□ 0.35
EPDR1-203ENST00000425345 DHX32Q7L7V1 743 aaKnown RBP17.22■□□□□ 0.35
EPDR1-203ENST00000425345 KCNB2Q92953 911 aa17.22■□□□□ 0.35
EPDR1-203ENST00000425345 PDCD2LQ9BRP1 358 aa17.22■□□□□ 0.35
EPDR1-203ENST00000425345 GRIN2DO15399 1336 aa17.21■□□□□ 0.35
EPDR1-203ENST00000425345 KIAA1217Q5T5P2 1943 aa17.21■□□□□ 0.35
EPDR1-203ENST00000425345 SCN10AQ9Y5Y9 1956 aa17.21■□□□□ 0.35
EPDR1-203ENST00000425345 GH1P01241 217 aa17.21■□□□□ 0.35
EPDR1-203ENST00000425345 ITGB8P26012 769 aa17.21■□□□□ 0.35
EPDR1-203ENST00000425345 EXOSC10Q01780 885 aaKnown RBP17.21■□□□□ 0.35
EPDR1-203ENST00000425345 LAMC2Q13753 1193 aa17.21■□□□□ 0.35
EPDR1-203ENST00000425345 TMEM63BQ5T3F8 832 aa17.21■□□□□ 0.35
EPDR1-203ENST00000425345 TMEM199Q8N511 208 aa17.21■□□□□ 0.35
EPDR1-203ENST00000425345 FANCBQ8NB91 859 aa17.21■□□□□ 0.35
EPDR1-203ENST00000425345 DDX41Q9UJV9 622 aaKnown RBP17.21■□□□□ 0.35
EPDR1-203ENST00000425345 FRMPD4Q14CM0 1322 aa17.21■□□□□ 0.34
EPDR1-203ENST00000425345 REC8O95072 547 aa17.2■□□□□ 0.34
EPDR1-203ENST00000425345 EIF2AK2P19525 551 aaKnown RBP17.2■□□□□ 0.34
EPDR1-203ENST00000425345 SMAD3P84022 425 aaKnown RBP17.2■□□□□ 0.34
EPDR1-203ENST00000425345 SHHQ15465 462 aa17.2■□□□□ 0.34
EPDR1-203ENST00000425345 FBXL16Q8N461 479 aa17.2■□□□□ 0.34
EPDR1-203ENST00000425345 LRCH3Q96II8 777 aa17.2■□□□□ 0.34
EPDR1-203ENST00000425345 ALDH8A1Q9H2A2 487 aaPredicted RBP17.2■□□□□ 0.34
EPDR1-203ENST00000425345 RBM28Q9NW13 759 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms