RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 ENAHQ8N8S7 591 aaPredicted RBP15.19■□□□□ 0.02
VRK3-203ENST00000424804 PNMA1Q8ND90 353 aa15.19■□□□□ 0.02
VRK3-203ENST00000424804 SCLYQ96I15 445 aa15.19■□□□□ 0.02
VRK3-203ENST00000424804 CTAGE1Q96RT6 745 aa15.19■□□□□ 0.02
VRK3-203ENST00000424804 DSCC1Q9BVC3 393 aa15.19■□□□□ 0.02
VRK3-203ENST00000424804 RNF41Q9H4P4 317 aaPredicted RBP15.19■□□□□ 0.02
VRK3-203ENST00000424804 MYH6P13533 1939 aa15.19■□□□□ 0.02
VRK3-203ENST00000424804 TRIP12Q14669 1992 aaPredicted RBP15.18■□□□□ 0.02
VRK3-203ENST00000424804 B4E1Z4 1266 aa15.18■□□□□ 0.02
VRK3-203ENST00000424804 OPLAHO14841 1288 aa15.18■□□□□ 0.02
VRK3-203ENST00000424804 CYP2C9P11712 490 aa15.18■□□□□ 0.02
VRK3-203ENST00000424804 NBPF20Q3BBV1 942 aa15.18■□□□□ 0.02
VRK3-203ENST00000424804 OTOP2Q7RTS6 562 aa15.18■□□□□ 0.02
VRK3-203ENST00000424804 OR6J1Q8NGC5 347 aa15.18■□□□□ 0.02
VRK3-203ENST00000424804 SYTL5Q8TDW5 730 aaPredicted RBP15.18■□□□□ 0.02
VRK3-203ENST00000424804 TAAR1Q96RJ0 339 aa15.18■□□□□ 0.02
VRK3-203ENST00000424804 PRDM6Q9NQX0 595 aa15.18■□□□□ 0.02
VRK3-203ENST00000424804 POLR3EQ9NVU0 708 aa15.18■□□□□ 0.02
VRK3-203ENST00000424804 PNMA2Q9UL42 364 aa15.18■□□□□ 0.02
VRK3-203ENST00000424804 RBAK-RBAKDNI3L0D1 243 aa15.17■□□□□ 0.02
VRK3-203ENST00000424804 MYL3P08590 195 aa15.17■□□□□ 0.02
VRK3-203ENST00000424804 SEC23AQ15436 765 aa15.17■□□□□ 0.02
VRK3-203ENST00000424804 CDC37Q16543 378 aaPredicted RBP15.17■□□□□ 0.02
VRK3-203ENST00000424804 SLC35G1Q2M3R5 365 aa15.17■□□□□ 0.02
VRK3-203ENST00000424804 USH1GQ495M9 461 aa15.17■□□□□ 0.02
VRK3-203ENST00000424804 RUFY2Q8WXA3 655 aa15.17■□□□□ 0.02
VRK3-203ENST00000424804 ZSCAN10Q96SZ4 725 aaPredicted RBP15.17■□□□□ 0.02
VRK3-203ENST00000424804 MTG1Q9BT17 334 aaPredicted RBP15.17■□□□□ 0.02
VRK3-203ENST00000424804 MAF1Q9H063 256 aa15.17■□□□□ 0.02
VRK3-203ENST00000424804 PRDM12Q9H4Q4 367 aa15.17■□□□□ 0.02
VRK3-203ENST00000424804 JMJD4Q9H9V9 463 aa15.17■□□□□ 0.02
VRK3-203ENST00000424804 TNKSO95271 1327 aa15.17■□□□□ 0.02
VRK3-203ENST00000424804 TRANK1O15050 2925 aa15.16■□□□□ 0.02
VRK3-203ENST00000424804 NKRFO15226 690 aaKnown RBP eCLIP15.16■□□□□ 0.02
VRK3-203ENST00000424804 CHMLP26374 656 aa15.16■□□□□ 0.02
VRK3-203ENST00000424804 NT5C2P49902 561 aa15.16■□□□□ 0.02
VRK3-203ENST00000424804 CPT1AP50416 773 aa15.16■□□□□ 0.02
VRK3-203ENST00000424804 PDE4DQ08499 809 aa15.16■□□□□ 0.02
VRK3-203ENST00000424804 TTLL4Q14679 1199 aa15.16■□□□□ 0.02
VRK3-203ENST00000424804 GPNMBQ14956 572 aa15.16■□□□□ 0.02
VRK3-203ENST00000424804 QRICH1Q2TAL8 776 aa15.16■□□□□ 0.02
VRK3-203ENST00000424804 STAG2Q8N3U4 1231 aa15.16■□□□□ 0.02
VRK3-203ENST00000424804 SCFD2Q8WU76 684 aa15.16■□□□□ 0.02
VRK3-203ENST00000424804 KAT2BQ92831 832 aa15.16■□□□□ 0.02
VRK3-203ENST00000424804 MTMR8Q96EF0 704 aa15.16■□□□□ 0.02
VRK3-203ENST00000424804 NKX2-4Q9H2Z4 354 aa15.16■□□□□ 0.02
VRK3-203ENST00000424804 BAZ2BQ9UIF8 2168 aaKnown RBP15.15■□□□□ 0.02
VRK3-203ENST00000424804 PPP1R11O60927 126 aaPredicted RBP15.15■□□□□ 0.02
VRK3-203ENST00000424804 TXNP10599 105 aaKnown RBP15.15■□□□□ 0.02
VRK3-203ENST00000424804 MYOGP15173 224 aa15.15■□□□□ 0.02
VRK3-203ENST00000424804 RABGGTBP53611 331 aa15.15■□□□□ 0.02
VRK3-203ENST00000424804 GHRHRQ02643 423 aa15.15■□□□□ 0.02
VRK3-203ENST00000424804 ARHGAP1Q07960 439 aa15.15■□□□□ 0.02
VRK3-203ENST00000424804 PPP2R5BQ15173 497 aa15.15■□□□□ 0.02
VRK3-203ENST00000424804 CCDC178Q5BJE1 867 aa15.15■□□□□ 0.02
VRK3-203ENST00000424804 NFRKBQ6P4R8 1299 aa15.15■□□□□ 0.02
VRK3-203ENST00000424804 CYB5R4Q7L1T6 521 aa15.15■□□□□ 0.02
VRK3-203ENST00000424804 MYH7BA7E2Y1 1941 aa15.15■□□□□ 0.02
VRK3-203ENST00000424804 PTPRSQ13332 1948 aa15.15■□□□□ 0.02
VRK3-203ENST00000424804 ABCB11O95342 1321 aa15.15■□□□□ 0.02
VRK3-203ENST00000424804 SUPT20HL2P0C7V6 817 aa15.14■□□□□ 0.01
VRK3-203ENST00000424804 RAB30Q15771 203 aa15.14■□□□□ 0.01
VRK3-203ENST00000424804 IMMTQ16891 758 aaKnown RBP15.14■□□□□ 0.01
VRK3-203ENST00000424804 LY6KQ17RY6 165 aa15.14■□□□□ 0.01
VRK3-203ENST00000424804 ASPRV1Q53RT3 343 aa15.14■□□□□ 0.01
VRK3-203ENST00000424804 IQCA1Q86XH1 822 aa15.14■□□□□ 0.01
VRK3-203ENST00000424804 RPUSD2Q8IZ73 545 aaKnown RBP15.14■□□□□ 0.01
VRK3-203ENST00000424804 KAT14Q9H8E8 782 aa15.14■□□□□ 0.01
VRK3-203ENST00000424804 TAF6LQ9Y6J9 622 aa15.14■□□□□ 0.01
VRK3-203ENST00000424804 TANC1Q9C0D5 1861 aa15.14■□□□□ 0.01
VRK3-203ENST00000424804 RAD50Q92878 1312 aa15.14■□□□□ 0.01
VRK3-203ENST00000424804 KPNA6O60684 536 aa15.13■□□□□ 0.01
VRK3-203ENST00000424804 RGS20O76081 388 aa15.13■□□□□ 0.01
VRK3-203ENST00000424804 IQCF3P0C7M6 154 aa15.13■□□□□ 0.01
VRK3-203ENST00000424804 PTPN11Q06124 597 aaPredicted RBP15.13■□□□□ 0.01
VRK3-203ENST00000424804 AFG1LQ8WV93 481 aa15.13■□□□□ 0.01
VRK3-203ENST00000424804 SENP2Q9HC62 589 aa15.13■□□□□ 0.01
VRK3-203ENST00000424804 VAT1LQ9HCJ6 419 aa15.13■□□□□ 0.01
VRK3-203ENST00000424804 CTNNA3Q9UI47 895 aa15.13■□□□□ 0.01
VRK3-203ENST00000424804 MAD2L2Q9UI95 211 aa15.13■□□□□ 0.01
VRK3-203ENST00000424804 NCOR1O75376 2440 aa15.12■□□□□ 0.01
VRK3-203ENST00000424804 PALM3A6NDB9 673 aaPredicted RBP15.12■□□□□ 0.01
VRK3-203ENST00000424804 ARHGEF15O94989 841 aa15.12■□□□□ 0.01
VRK3-203ENST00000424804 MMP3P08254 477 aa15.12■□□□□ 0.01
VRK3-203ENST00000424804 HSD17B4P51659 736 aa15.12■□□□□ 0.01
VRK3-203ENST00000424804 PTH1RQ03431 593 aa15.12■□□□□ 0.01
VRK3-203ENST00000424804 FBXO11Q86XK2 927 aa15.12■□□□□ 0.01
VRK3-203ENST00000424804 NSUN6Q8TEA1 469 aaKnown RBP15.12■□□□□ 0.01
VRK3-203ENST00000424804 DHX38Q92620 1227 aaKnown RBP15.12■□□□□ 0.01
VRK3-203ENST00000424804 IWS1Q96ST2 819 aa15.12■□□□□ 0.01
VRK3-203ENST00000424804 RMDN3Q96TC7 470 aa15.12■□□□□ 0.01
VRK3-203ENST00000424804 MSRAQ9UJ68 235 aa15.12■□□□□ 0.01
VRK3-203ENST00000424804 DDX41Q9UJV9 622 aaKnown RBP15.12■□□□□ 0.01
VRK3-203ENST00000424804 PCDHA11Q9Y5I1 949 aa15.12■□□□□ 0.01
VRK3-203ENST00000424804 SLC4A7Q9Y6M7 1214 aa15.12■□□□□ 0.01
VRK3-203ENST00000424804 XIRP2A4UGR9 3374 aa15.12■□□□□ 0.01
VRK3-203ENST00000424804 PRRC2BQ5JSZ5 2229 aaKnown RBP15.11■□□□□ 0.01
VRK3-203ENST00000424804 PITPNM1O00562 1244 aa15.11■□□□□ 0.01
VRK3-203ENST00000424804 PFKMP08237 780 aa15.11■□□□□ 0.01
VRK3-203ENST00000424804 PARP1P09874 1014 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms