RNA–Protein interactions for RNA: ENST00000421434.5

SCRN1-204, Transcript of secernin 1, humanhuman

TSL 3

Gene SCRN1, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-204ENST00000421434 CA3P07451 260 aa11.01□□□□□ -0.65
SCRN1-204ENST00000421434 IQCF3P0C7M6 154 aa11.01□□□□□ -0.65
SCRN1-204ENST00000421434 COL9A1P20849 921 aa11.01□□□□□ -0.65
SCRN1-204ENST00000421434 PWP2Q15269 919 aaKnown RBP11.01□□□□□ -0.65
SCRN1-204ENST00000421434 SCFD2Q8WU76 684 aa11.01□□□□□ -0.65
SCRN1-204ENST00000421434 TTC14Q96N46 770 aa11.01□□□□□ -0.65
SCRN1-204ENST00000421434 NECAB3Q96P71 396 aaPredicted RBP11.01□□□□□ -0.65
SCRN1-204ENST00000421434 CRBNQ96SW2 442 aa11.01□□□□□ -0.65
SCRN1-204ENST00000421434 MPHOSPH6Q99547 160 aaKnown RBP11.01□□□□□ -0.65
SCRN1-204ENST00000421434 TSPYL2Q9H2G4 693 aaPredicted RBP11.01□□□□□ -0.65
SCRN1-204ENST00000421434 RAPGEFL1Q9UHV5 662 aa11.01□□□□□ -0.65
SCRN1-204ENST00000421434 NOD1Q9Y239 953 aa11.01□□□□□ -0.65
SCRN1-204ENST00000421434 RAD50Q92878 1312 aa11.01□□□□□ -0.65
SCRN1-204ENST00000421434 XIRP2A4UGR9 3374 aa11□□□□□ -0.65
SCRN1-204ENST00000421434 PRRC2BQ5JSZ5 2229 aaKnown RBP11□□□□□ -0.65
SCRN1-204ENST00000421434 A6NJR5 290 aa11□□□□□ -0.65
SCRN1-204ENST00000421434 RBAK-RBAKDNI3L0D1 243 aa11□□□□□ -0.65
SCRN1-204ENST00000421434 NKRFO15226 690 aaKnown RBP eCLIP11□□□□□ -0.65
SCRN1-204ENST00000421434 ARIH2O95376 493 aa11□□□□□ -0.65
SCRN1-204ENST00000421434 PFKMP08237 780 aa11□□□□□ -0.65
SCRN1-204ENST00000421434 ACTN1P12814 892 aa11□□□□□ -0.65
SCRN1-204ENST00000421434 EDNRBP24530 442 aa11□□□□□ -0.65
SCRN1-204ENST00000421434 HOXD11P31277 338 aaPredicted RBP11□□□□□ -0.65
SCRN1-204ENST00000421434 LY6KQ17RY6 165 aa11□□□□□ -0.65
SCRN1-204ENST00000421434 KRT40Q6A162 431 aa11□□□□□ -0.65
SCRN1-204ENST00000421434 NFRKBQ6P4R8 1299 aa11□□□□□ -0.65
SCRN1-204ENST00000421434 SEPT14Q6ZU15 432 aa11□□□□□ -0.65
SCRN1-204ENST00000421434 CHST3Q7LGC8 479 aa11□□□□□ -0.65
SCRN1-204ENST00000421434 TBC1D10CQ8IV04 446 aa11□□□□□ -0.65
SCRN1-204ENST00000421434 DNERQ8NFT8 737 aa11□□□□□ -0.65
SCRN1-204ENST00000421434 AFG1LQ8WV93 481 aa11□□□□□ -0.65
SCRN1-204ENST00000421434 ARNTL2Q8WYA1 636 aa11□□□□□ -0.65
SCRN1-204ENST00000421434 LNPKQ9C0E8 428 aa11□□□□□ -0.65
SCRN1-204ENST00000421434 RNF216Q9NWF9 866 aaPredicted RBP11□□□□□ -0.65
SCRN1-204ENST00000421434 PNMA2Q9UL42 364 aa11□□□□□ -0.65
SCRN1-204ENST00000421434 EPOPA6NHQ4 379 aa10.99□□□□□ -0.65
SCRN1-204ENST00000421434 B4DLN1 442 aa10.99□□□□□ -0.65
SCRN1-204ENST00000421434 KPNA6O60684 536 aa10.99□□□□□ -0.65
SCRN1-204ENST00000421434 SNHG28P0DPA3 235 aa10.99□□□□□ -0.65
SCRN1-204ENST00000421434 BMP1P13497 986 aa10.99□□□□□ -0.65
SCRN1-204ENST00000421434 MRPL12P52815 198 aaKnown RBP10.99□□□□□ -0.65
SCRN1-204ENST00000421434 PTGISQ16647 500 aa10.99□□□□□ -0.65
SCRN1-204ENST00000421434 B4GALNT3Q6L9W6 998 aa10.99□□□□□ -0.65
SCRN1-204ENST00000421434 ESR2Q92731 530 aa10.99□□□□□ -0.65
SCRN1-204ENST00000421434 TAAR1Q96RJ0 339 aa10.99□□□□□ -0.65
SCRN1-204ENST00000421434 VAT1LQ9HCJ6 419 aa10.99□□□□□ -0.65
SCRN1-204ENST00000421434 MTCH2Q9Y6C9 303 aa10.99□□□□□ -0.65
SCRN1-204ENST00000421434 CCDC171Q6TFL3 1326 aa10.99□□□□□ -0.65
SCRN1-204ENST00000421434 REV3LO60673 3130 aa10.99□□□□□ -0.65
SCRN1-204ENST00000421434 TRANK1O15050 2925 aa10.98□□□□□ -0.65
SCRN1-204ENST00000421434 LCTP09848 1927 aa10.98□□□□□ -0.65
SCRN1-204ENST00000421434 KIF28PB7ZC32 967 aa10.98□□□□□ -0.65
SCRN1-204ENST00000421434 PITPNM1O00562 1244 aa10.98□□□□□ -0.65
SCRN1-204ENST00000421434 ZNF213O14771 459 aa10.98□□□□□ -0.65
SCRN1-204ENST00000421434 GTPBP6O43824 516 aaPredicted RBP10.98□□□□□ -0.65
SCRN1-204ENST00000421434 KDM4AO75164 1064 aa10.98□□□□□ -0.65
SCRN1-204ENST00000421434 ARHGEF15O94989 841 aa10.98□□□□□ -0.65
SCRN1-204ENST00000421434 RFC2P35250 354 aa10.98□□□□□ -0.65
SCRN1-204ENST00000421434 KCNQ1P51787 676 aa10.98□□□□□ -0.65
SCRN1-204ENST00000421434 RRP1P56182 461 aaKnown RBP10.98□□□□□ -0.65
SCRN1-204ENST00000421434 TAP1Q03518 808 aa10.98□□□□□ -0.65
SCRN1-204ENST00000421434 BFSP2Q13515 415 aa10.98□□□□□ -0.65
SCRN1-204ENST00000421434 CDC37Q16543 378 aaPredicted RBP10.98□□□□□ -0.65
SCRN1-204ENST00000421434 GPATCH4Q5T3I0 446 aaKnown RBP10.98□□□□□ -0.65
SCRN1-204ENST00000421434 TMCO2Q7Z6W1 182 aaPredicted RBP10.98□□□□□ -0.65
SCRN1-204ENST00000421434 HERC6Q8IVU3 1022 aa10.98□□□□□ -0.65
SCRN1-204ENST00000421434 ADGRF4Q8IZF3 695 aa10.98□□□□□ -0.65
SCRN1-204ENST00000421434 PHOSPHO2Q8TCD6 241 aa10.98□□□□□ -0.65
SCRN1-204ENST00000421434 RNF41Q9H4P4 317 aaPredicted RBP10.98□□□□□ -0.65
SCRN1-204ENST00000421434 COL20A1Q9P218 1284 aa10.98□□□□□ -0.65
SCRN1-204ENST00000421434 NEDD4P46934 1319 aa10.98□□□□□ -0.65
SCRN1-204ENST00000421434 WDR19Q8NEZ3 1342 aa10.98□□□□□ -0.65
SCRN1-204ENST00000421434 LRRC37A2A6NM11 1700 aa10.98□□□□□ -0.65
SCRN1-204ENST00000421434 GBF1Q92538 1859 aa10.98□□□□□ -0.65
SCRN1-204ENST00000421434 DHX16O60231 1041 aaKnown RBP10.97□□□□□ -0.65
SCRN1-204ENST00000421434 GH1P01241 217 aa10.97□□□□□ -0.65
SCRN1-204ENST00000421434 MMP3P08254 477 aa10.97□□□□□ -0.65
SCRN1-204ENST00000421434 SDSP20132 328 aa10.97□□□□□ -0.65
SCRN1-204ENST00000421434 PTPN11Q06124 597 aaPredicted RBP10.97□□□□□ -0.65
SCRN1-204ENST00000421434 HDAC1Q13547 482 aaPredicted RBP10.97□□□□□ -0.65
SCRN1-204ENST00000421434 STXBP2Q15833 593 aa10.97□□□□□ -0.65
SCRN1-204ENST00000421434 GDF6Q6KF10 455 aaPredicted RBP10.97□□□□□ -0.65
SCRN1-204ENST00000421434 CCDC62Q6P9F0 684 aa10.97□□□□□ -0.65
SCRN1-204ENST00000421434 CWC27Q6UX04 472 aaKnown RBP10.97□□□□□ -0.65
SCRN1-204ENST00000421434 SPRED2Q7Z698 418 aa10.97□□□□□ -0.65
SCRN1-204ENST00000421434 DGKHQ86XP1 1220 aa10.97□□□□□ -0.65
SCRN1-204ENST00000421434 PNMA1Q8ND90 353 aa10.97□□□□□ -0.65
SCRN1-204ENST00000421434 RGS22Q8NE09 1264 aa10.97□□□□□ -0.65
SCRN1-204ENST00000421434 SYTL5Q8TDW5 730 aaPredicted RBP10.97□□□□□ -0.65
SCRN1-204ENST00000421434 NSUN6Q8TEA1 469 aaKnown RBP10.97□□□□□ -0.65
SCRN1-204ENST00000421434 SLC9A7Q96T83 725 aa10.97□□□□□ -0.65
SCRN1-204ENST00000421434 RMDN3Q96TC7 470 aa10.97□□□□□ -0.65
SCRN1-204ENST00000421434 KAT14Q9H8E8 782 aa10.97□□□□□ -0.65
SCRN1-204ENST00000421434 SCN5AQ14524 2016 aa10.97□□□□□ -0.65
SCRN1-204ENST00000421434 TCF20Q9UGU0 1960 aaKnown RBP10.96□□□□□ -0.65
SCRN1-204ENST00000421434 ZMYM6O95789 1325 aa10.96□□□□□ -0.65
SCRN1-204ENST00000421434 B4E1Z4 1266 aa10.96□□□□□ -0.65
SCRN1-204ENST00000421434 TLL1O43897 1013 aa10.96□□□□□ -0.65
SCRN1-204ENST00000421434 SORBS3O60504 671 aa10.96□□□□□ -0.65
SCRN1-204ENST00000421434 PCP11498 1178 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms