RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 NR1D1P20393 614 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 TNFRSF8P28908 595 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 LTKP29376 864 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 GBP2P32456 591 aaPredicted RBP6.77□□□□□ -1.33
CHD2-202ENST00000420239 MDH1P40925 334 aaKnown RBP6.77□□□□□ -1.33
CHD2-202ENST00000420239 METAP2P50579 478 aaKnown RBP eCLIP6.77□□□□□ -1.33
CHD2-202ENST00000420239 CDR1P51861 262 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 COPB1P53618 953 aaKnown RBP6.77□□□□□ -1.33
CHD2-202ENST00000420239 CLDN10P78369 228 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 SPAG1Q07617 926 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 RILPL1Q5EBL4 403 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 C1orf141Q5JVX7 400 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 CCDC122Q5T0U0 273 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 ANKRD13DQ6ZTN6 518 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 CCDC121Q6ZUS5 278 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 CREG2Q8IUH2 290 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 ANKMY2Q8IV38 441 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 NOSTRINQ8IVI9 506 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 CCDC50Q8IVM0 306 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 C1orf131Q8NDD1 294 aaKnown RBP6.77□□□□□ -1.33
CHD2-202ENST00000420239 LMBR1Q8WVP7 490 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 APPBP2Q92624 585 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 STAMBPL1Q96FJ0 436 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 ZNF594Q96JF6 807 aaPredicted RBP6.77□□□□□ -1.33
CHD2-202ENST00000420239 TMEM87BQ96K49 555 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 PURBQ96QR8 312 aaKnown RBP6.77□□□□□ -1.33
CHD2-202ENST00000420239 NUP88Q99567 741 aaPredicted RBP6.77□□□□□ -1.33
CHD2-202ENST00000420239 PRR14Q9BWN1 585 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 FOXP1Q9H334 677 aaPredicted RBP6.77□□□□□ -1.33
CHD2-202ENST00000420239 AATFQ9NY61 560 aaKnown RBP eCLIP6.77□□□□□ -1.33
CHD2-202ENST00000420239 CTNND2Q9UQB3 1225 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 SH3BP1Q9Y3L3 701 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 ATRNO75882 1429 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 NUP188Q5SRE5 1749 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 ANO9A1A5B4 782 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 RANBP6O60518 1105 aaKnown RBP6.77□□□□□ -1.33
CHD2-202ENST00000420239 FMNL1O95466 1100 aaPredicted RBP6.77□□□□□ -1.33
CHD2-202ENST00000420239 FAM153BP0C7A2 387 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 ATP2B4P23634 1241 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 PDE6BP35913 854 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 AIMP1Q12904 312 aaKnown RBP6.77□□□□□ -1.33
CHD2-202ENST00000420239 XRCC4Q13426 336 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 FAM153CQ494X1 144 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 AP1ARQ63HQ0 302 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 EMBQ6PCB8 327 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 WDR59Q6PJI9 974 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 APOA5Q6Q788 366 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 COPS6Q7L5N1 327 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 RALYLQ86SE5 291 aaKnown RBP6.77□□□□□ -1.33
CHD2-202ENST00000420239 ABTB2Q8N961 1025 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 CCDC26Q8TAB7 109 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 PHKBQ93100 1093 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 CCDC43Q96MW1 224 aaKnown RBP6.77□□□□□ -1.33
CHD2-202ENST00000420239 GSDMAQ96QA5 445 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 RUFY1Q96T51 708 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 SH3GL3Q99963 347 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 NUP58Q9BVL2 599 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 VPS16Q9H269 839 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 EHD2Q9NZN4 543 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 FAM153AQ9UHL3 310 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 DENND2AQ9ULE3 1009 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 SETD1BQ9UPS6 1966 aaKnown RBP6.77□□□□□ -1.33
CHD2-202ENST00000420239 UBN2Q6ZU65 1347 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 KIF1AQ12756 1690 aa6.77□□□□□ -1.33
CHD2-202ENST00000420239 TIAM2Q8IVF5 1701 aa6.76□□□□□ -1.33
CHD2-202ENST00000420239 GLI3P10071 1580 aa6.76□□□□□ -1.33
CHD2-202ENST00000420239 CHD4Q14839 1912 aa6.76□□□□□ -1.33
CHD2-202ENST00000420239 AKAP11Q9UKA4 1901 aa6.76□□□□□ -1.33
CHD2-202ENST00000420239 GOLGA6L7A0A1B0GV03 622 aa6.76□□□□□ -1.33
CHD2-202ENST00000420239 E7EVH7 732 aa6.76□□□□□ -1.33
CHD2-202ENST00000420239 EYA2O00167 538 aa6.76□□□□□ -1.33
CHD2-202ENST00000420239 N4BP3O15049 544 aa6.76□□□□□ -1.33
CHD2-202ENST00000420239 MGRN1O60291 552 aa6.76□□□□□ -1.33
CHD2-202ENST00000420239 ATP6V1G2O95670 118 aa6.76□□□□□ -1.33
CHD2-202ENST00000420239 MMP1P03956 469 aa6.76□□□□□ -1.33
CHD2-202ENST00000420239 CCNYL3P0C7X3 344 aa6.76□□□□□ -1.33
CHD2-202ENST00000420239 IFNAR1P17181 557 aa6.76□□□□□ -1.33
CHD2-202ENST00000420239 RXRAP19793 462 aa6.76□□□□□ -1.33
CHD2-202ENST00000420239 SLC8A1P32418 973 aa6.76□□□□□ -1.33
CHD2-202ENST00000420239 IARSP41252 1262 aaKnown RBP6.76□□□□□ -1.33
CHD2-202ENST00000420239 LIFRP42702 1097 aa6.76□□□□□ -1.33
CHD2-202ENST00000420239 SCTRP47872 440 aa6.76□□□□□ -1.33
CHD2-202ENST00000420239 ELF3P78545 371 aaPredicted RBP6.76□□□□□ -1.33
CHD2-202ENST00000420239 ITGB3BPQ13352 177 aaPredicted RBP6.76□□□□□ -1.33
CHD2-202ENST00000420239 TRIM29Q14134 588 aa6.76□□□□□ -1.33
CHD2-202ENST00000420239 LACTB2Q53H82 288 aaPredicted RBP6.76□□□□□ -1.33
CHD2-202ENST00000420239 IQCKQ8N0W5 287 aa6.76□□□□□ -1.33
CHD2-202ENST00000420239 OGFOD1Q8N543 542 aa6.76□□□□□ -1.33
CHD2-202ENST00000420239 EHBP1Q8NDI1 1231 aa6.76□□□□□ -1.33
CHD2-202ENST00000420239 OR8K1Q8NGG5 319 aa6.76□□□□□ -1.33
CHD2-202ENST00000420239 IGDCC4Q8TDY8 1250 aa6.76□□□□□ -1.33
CHD2-202ENST00000420239 WASF1Q92558 559 aa6.76□□□□□ -1.33
CHD2-202ENST00000420239 ZBTB10Q96DT7 871 aa6.76□□□□□ -1.33
CHD2-202ENST00000420239 SPDL1Q96EA4 605 aa6.76□□□□□ -1.33
CHD2-202ENST00000420239 HOOK2Q96ED9 719 aa6.76□□□□□ -1.33
CHD2-202ENST00000420239 SPATS2LQ9NUQ6 558 aaKnown RBP6.76□□□□□ -1.33
CHD2-202ENST00000420239 SNX12Q9UMY4 172 aa6.76□□□□□ -1.33
CHD2-202ENST00000420239 CEP131Q9UPN4 1083 aa6.76□□□□□ -1.33
CHD2-202ENST00000420239 RIPOR2Q9Y4F9 1068 aa6.76□□□□□ -1.33
CHD2-202ENST00000420239 GPSM3Q9Y4H4 160 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms