RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 ANKS1AQ92625 1134 aa20.22■□□□□ 0.83
PTCD1-202ENST00000419981 MTG1Q9BT17 334 aaPredicted RBP20.22■□□□□ 0.83
PTCD1-202ENST00000419981 KRT23Q9C075 422 aa20.22■□□□□ 0.83
PTCD1-202ENST00000419981 DOCK5Q9H7D0 1870 aa20.22■□□□□ 0.83
PTCD1-202ENST00000419981 TET1Q8NFU7 2136 aa20.21■□□□□ 0.83
PTCD1-202ENST00000419981 CUL9Q8IWT3 2517 aa20.21■□□□□ 0.83
PTCD1-202ENST00000419981 PBX2P40425 430 aa20.21■□□□□ 0.83
PTCD1-202ENST00000419981 ADGRF4Q8IZF3 695 aa20.21■□□□□ 0.83
PTCD1-202ENST00000419981 MAF1Q9H063 256 aa20.21■□□□□ 0.83
PTCD1-202ENST00000419981 WNT8AQ9H1J5 351 aa20.21■□□□□ 0.83
PTCD1-202ENST00000419981 CNNM2Q9H8M5 875 aa20.21■□□□□ 0.83
PTCD1-202ENST00000419981 ZSWIM5Q9P217 1185 aa20.21■□□□□ 0.83
PTCD1-202ENST00000419981 PRUNE2Q8WUY3 3088 aa20.21■□□□□ 0.83
PTCD1-202ENST00000419981 PARP1P09874 1014 aaKnown RBP20.2■□□□□ 0.82
PTCD1-202ENST00000419981 SUPT20HL2P0C7V6 817 aa20.2■□□□□ 0.82
PTCD1-202ENST00000419981 TXNP10599 105 aaKnown RBP20.2■□□□□ 0.82
PTCD1-202ENST00000419981 TTLL4Q14679 1199 aa20.2■□□□□ 0.82
PTCD1-202ENST00000419981 RPUSD2Q8IZ73 545 aaKnown RBP20.2■□□□□ 0.82
PTCD1-202ENST00000419981 UBAC1Q9BSL1 405 aa20.2■□□□□ 0.82
PTCD1-202ENST00000419981 TRMT13Q9NUP7 481 aaKnown RBP20.2■□□□□ 0.82
PTCD1-202ENST00000419981 CXXC1Q9P0U4 656 aaPredicted RBP20.2■□□□□ 0.82
PTCD1-202ENST00000419981 DHX16O60231 1041 aaKnown RBP20.19■□□□□ 0.82
PTCD1-202ENST00000419981 KPNA6O60684 536 aa20.19■□□□□ 0.82
PTCD1-202ENST00000419981 RAB30Q15771 203 aa20.19■□□□□ 0.82
PTCD1-202ENST00000419981 QRICH1Q2TAL8 776 aa20.19■□□□□ 0.82
PTCD1-202ENST00000419981 OTOP2Q7RTS6 562 aa20.19■□□□□ 0.82
PTCD1-202ENST00000419981 COPS5Q92905 334 aa20.19■□□□□ 0.82
PTCD1-202ENST00000419981 MSRAQ9UJ68 235 aa20.19■□□□□ 0.82
PTCD1-202ENST00000419981 A6NJR5 290 aa20.18■□□□□ 0.82
PTCD1-202ENST00000419981 CYP2C9P11712 490 aa20.18■□□□□ 0.82
PTCD1-202ENST00000419981 FAM47CQ5HY64 1035 aa20.18■□□□□ 0.82
PTCD1-202ENST00000419981 MCF2L2Q86YR7 1114 aa20.18■□□□□ 0.82
PTCD1-202ENST00000419981 SCLYQ96I15 445 aa20.18■□□□□ 0.82
PTCD1-202ENST00000419981 GAS2L1Q99501 681 aaPredicted RBP20.18■□□□□ 0.82
PTCD1-202ENST00000419981 ARIH2O95376 493 aa20.17■□□□□ 0.82
PTCD1-202ENST00000419981 NBPF20Q3BBV1 942 aa20.17■□□□□ 0.82
PTCD1-202ENST00000419981 IFIT1BQ5T764 474 aaKnown RBP20.17■□□□□ 0.82
PTCD1-202ENST00000419981 NFRKBQ6P4R8 1299 aa20.17■□□□□ 0.82
PTCD1-202ENST00000419981 FBXO11Q86XK2 927 aa20.17■□□□□ 0.82
PTCD1-202ENST00000419981 SYTL5Q8TDW5 730 aaPredicted RBP20.17■□□□□ 0.82
PTCD1-202ENST00000419981 NSUN6Q8TEA1 469 aaKnown RBP20.17■□□□□ 0.82
PTCD1-202ENST00000419981 TBC1D5Q92609 795 aa20.17■□□□□ 0.82
PTCD1-202ENST00000419981 TAAR1Q96RJ0 339 aa20.17■□□□□ 0.82
PTCD1-202ENST00000419981 IL25Q9H293 177 aa20.17■□□□□ 0.82
PTCD1-202ENST00000419981 VAT1LQ9HCJ6 419 aa20.17■□□□□ 0.82
PTCD1-202ENST00000419981 MRPL11Q9Y3B7 192 aaKnown RBP20.17■□□□□ 0.82
PTCD1-202ENST00000419981 KAT6AQ92794 2004 aa20.16■□□□□ 0.82
PTCD1-202ENST00000419981 TTC22Q5TAA0 569 aa20.16■□□□□ 0.82
PTCD1-202ENST00000419981 SEPT14Q6ZU15 432 aa20.16■□□□□ 0.82
PTCD1-202ENST00000419981 JMJD4Q9H9V9 463 aa20.16■□□□□ 0.82
PTCD1-202ENST00000419981 COL20A1Q9P218 1284 aa20.16■□□□□ 0.82
PTCD1-202ENST00000419981 ZBBXA8MT70 800 aa20.15■□□□□ 0.82
PTCD1-202ENST00000419981 PFKMP08237 780 aa20.15■□□□□ 0.82
PTCD1-202ENST00000419981 PTPN11Q06124 597 aaPredicted RBP20.15■□□□□ 0.82
PTCD1-202ENST00000419981 STXBP2Q15833 593 aa20.15■□□□□ 0.82
PTCD1-202ENST00000419981 CCDC62Q6P9F0 684 aa20.15■□□□□ 0.82
PTCD1-202ENST00000419981 IWS1Q96ST2 819 aa20.15■□□□□ 0.82
PTCD1-202ENST00000419981 RMDN3Q96TC7 470 aa20.15■□□□□ 0.82
PTCD1-202ENST00000419981 NKX2-4Q9H2Z4 354 aa20.15■□□□□ 0.82
PTCD1-202ENST00000419981 PRDM12Q9H4Q4 367 aa20.15■□□□□ 0.82
PTCD1-202ENST00000419981 SLC4A7Q9Y6M7 1214 aa20.15■□□□□ 0.82
PTCD1-202ENST00000419981 GH1P01241 217 aa20.14■□□□□ 0.81
PTCD1-202ENST00000419981 GSPT1P15170 499 aaKnown RBP20.14■□□□□ 0.81
PTCD1-202ENST00000419981 PDE4AP27815 886 aa20.14■□□□□ 0.81
PTCD1-202ENST00000419981 SEC23AQ15436 765 aa20.14■□□□□ 0.81
PTCD1-202ENST00000419981 LY6KQ17RY6 165 aa20.14■□□□□ 0.81
PTCD1-202ENST00000419981 ARHGEF16Q5VV41 709 aa20.14■□□□□ 0.81
PTCD1-202ENST00000419981 DEFB128Q7Z7B8 93 aa20.14■□□□□ 0.81
PTCD1-202ENST00000419981 STAG2Q8N3U4 1231 aa20.14■□□□□ 0.81
PTCD1-202ENST00000419981 PPP1R13LQ8WUF5 828 aa20.14■□□□□ 0.81
PTCD1-202ENST00000419981 AMNQ9BXJ7 453 aa20.14■□□□□ 0.81
PTCD1-202ENST00000419981 SLC28A3Q9HAS3 691 aa20.14■□□□□ 0.81
PTCD1-202ENST00000419981 CHD9Q3L8U1 2897 aa20.14■□□□□ 0.81
PTCD1-202ENST00000419981 CFBP00751 764 aa20.13■□□□□ 0.81
PTCD1-202ENST00000419981 MMP3P08254 477 aa20.13■□□□□ 0.81
PTCD1-202ENST00000419981 EIF2AK2P19525 551 aaKnown RBP20.13■□□□□ 0.81
PTCD1-202ENST00000419981 CHMP4BP1P59074 171 aa20.13■□□□□ 0.81
PTCD1-202ENST00000419981 TRDNQ13061 729 aa20.13■□□□□ 0.81
PTCD1-202ENST00000419981 CYB5R4Q7L1T6 521 aa20.13■□□□□ 0.81
PTCD1-202ENST00000419981 USP38Q8NB14 1042 aa20.13■□□□□ 0.81
PTCD1-202ENST00000419981 AFG1LQ8WV93 481 aa20.13■□□□□ 0.81
PTCD1-202ENST00000419981 RUFY2Q8WXA3 655 aa20.13■□□□□ 0.81
PTCD1-202ENST00000419981 VWCEQ96DN2 955 aa20.13■□□□□ 0.81
PTCD1-202ENST00000419981 NOD1Q9Y239 953 aa20.13■□□□□ 0.81
PTCD1-202ENST00000419981 YBX2Q9Y2T7 364 aaKnown RBP20.13■□□□□ 0.81
PTCD1-202ENST00000419981 KLRF2D3W0D1 207 aa20.12■□□□□ 0.81
PTCD1-202ENST00000419981 PITPNM1O00562 1244 aa20.12■□□□□ 0.81
PTCD1-202ENST00000419981 ACTN1P12814 892 aa20.12■□□□□ 0.81
PTCD1-202ENST00000419981 RFC2P35250 354 aa20.12■□□□□ 0.81
PTCD1-202ENST00000419981 RABGGTBP53611 331 aa20.12■□□□□ 0.81
PTCD1-202ENST00000419981 ARHGAP1Q07960 439 aa20.12■□□□□ 0.81
PTCD1-202ENST00000419981 RETREG2Q8NC44 543 aa20.12■□□□□ 0.81
PTCD1-202ENST00000419981 PXMP2Q9NR77 195 aa20.12■□□□□ 0.81
PTCD1-202ENST00000419981 COL4A4P53420 1690 aaPredicted RBP20.12■□□□□ 0.81
PTCD1-202ENST00000419981 MICAL3Q7RTP6 2002 aa20.12■□□□□ 0.81
PTCD1-202ENST00000419981 ATP2A2P16615 1042 aaKnown RBP20.11■□□□□ 0.81
PTCD1-202ENST00000419981 HSD17B4P51659 736 aa20.11■□□□□ 0.81
PTCD1-202ENST00000419981 BFSP2Q13515 415 aa20.11■□□□□ 0.81
PTCD1-202ENST00000419981 CHST3Q7LGC8 479 aa20.11■□□□□ 0.81
PTCD1-202ENST00000419981 MTMR8Q96EF0 704 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms