RNA–Protein interactions for RNA: ENST00000418713.5

RPUSD3-202, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 955 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-202ENST00000418713 NOL8Q76FK4 1167 aaKnown RBP22.81■■□□□ 1.24
RPUSD3-202ENST00000418713 SHISA4Q96DD7 197 aa22.81■■□□□ 1.24
RPUSD3-202ENST00000418713 XPNPEP3Q9NQH7 507 aa22.81■■□□□ 1.24
RPUSD3-202ENST00000418713 PXMP2Q9NR77 195 aa22.81■■□□□ 1.24
RPUSD3-202ENST00000418713 DNM1LO00429 736 aa22.8■■□□□ 1.24
RPUSD3-202ENST00000418713 NKRFO15226 690 aaKnown RBP eCLIP22.8■■□□□ 1.24
RPUSD3-202ENST00000418713 STAM2O75886 525 aa22.8■■□□□ 1.24
RPUSD3-202ENST00000418713 TNFAIP2Q03169 654 aa22.8■■□□□ 1.24
RPUSD3-202ENST00000418713 FAM177A1Q8N128 213 aaPredicted RBP22.8■■□□□ 1.24
RPUSD3-202ENST00000418713 SCFD2Q8WU76 684 aa22.8■■□□□ 1.24
RPUSD3-202ENST00000418713 BARHL2Q9NY43 387 aa22.8■■□□□ 1.24
RPUSD3-202ENST00000418713 OPLAHO14841 1288 aa22.79■■□□□ 1.24
RPUSD3-202ENST00000418713 FOSP01100 380 aaPredicted RBP22.79■■□□□ 1.24
RPUSD3-202ENST00000418713 NR3C2P08235 984 aa22.79■■□□□ 1.24
RPUSD3-202ENST00000418713 SCG2P13521 617 aa22.79■■□□□ 1.24
RPUSD3-202ENST00000418713 GNA11P29992 359 aa22.79■■□□□ 1.24
RPUSD3-202ENST00000418713 HOXA13P31271 388 aaPredicted RBP22.79■■□□□ 1.24
RPUSD3-202ENST00000418713 AK2P54819 239 aa22.79■■□□□ 1.24
RPUSD3-202ENST00000418713 XRRA1Q6P2D8 792 aa22.79■■□□□ 1.24
RPUSD3-202ENST00000418713 KCNV1Q6PIU1 500 aa22.79■■□□□ 1.24
RPUSD3-202ENST00000418713 FCHSD1Q86WN1 690 aa22.79■■□□□ 1.24
RPUSD3-202ENST00000418713 CCDC148Q8NFR7 591 aa22.79■■□□□ 1.24
RPUSD3-202ENST00000418713 PURBQ96QR8 312 aaKnown RBP22.79■■□□□ 1.24
RPUSD3-202ENST00000418713 KATNBL1Q9H079 304 aa22.79■■□□□ 1.24
RPUSD3-202ENST00000418713 AP5M1Q9H0R1 490 aa22.79■■□□□ 1.24
RPUSD3-202ENST00000418713 C11orf49Q9H6J7 331 aa22.79■■□□□ 1.24
RPUSD3-202ENST00000418713 SPDYE3A6NKU9 549 aa22.78■■□□□ 1.24
RPUSD3-202ENST00000418713 ZEB2O60315 1214 aa22.78■■□□□ 1.24
RPUSD3-202ENST00000418713 PFKFB2O60825 505 aa22.78■■□□□ 1.24
RPUSD3-202ENST00000418713 CCND2P30279 289 aa22.78■■□□□ 1.24
RPUSD3-202ENST00000418713 TTLL4Q14679 1199 aa22.78■■□□□ 1.24
RPUSD3-202ENST00000418713 RABEP1Q15276 862 aa22.78■■□□□ 1.24
RPUSD3-202ENST00000418713 BRDTQ58F21 947 aaPredicted RBP22.78■■□□□ 1.24
RPUSD3-202ENST00000418713 EEPD1Q7L9B9 569 aa22.78■■□□□ 1.24
RPUSD3-202ENST00000418713 PCSK9Q8NBP7 692 aaKnown RBP22.78■■□□□ 1.24
RPUSD3-202ENST00000418713 TSEN34Q9BSV6 310 aaKnown RBP22.78■■□□□ 1.24
RPUSD3-202ENST00000418713 SLC26A6Q9BXS9 759 aa22.78■■□□□ 1.24
RPUSD3-202ENST00000418713 C6orf50Q9HD87 102 aa22.78■■□□□ 1.24
RPUSD3-202ENST00000418713 ASTN1O14525 1302 aa22.78■■□□□ 1.24
RPUSD3-202ENST00000418713 hCG_1642624A0A1W2PR95 340 aa22.77■■□□□ 1.24
RPUSD3-202ENST00000418713 RBM47A0AV96 593 aaKnown RBP22.77■■□□□ 1.24
RPUSD3-202ENST00000418713 SMCO2A6NFE2 343 aa22.77■■□□□ 1.24
RPUSD3-202ENST00000418713 DEXIO95424 95 aa22.77■■□□□ 1.24
RPUSD3-202ENST00000418713 XBP1P17861 261 aa22.77■■□□□ 1.24
RPUSD3-202ENST00000418713 EIF2AK2P19525 551 aaKnown RBP22.77■■□□□ 1.24
RPUSD3-202ENST00000418713 ADCY7P51828 1080 aa22.77■■□□□ 1.24
RPUSD3-202ENST00000418713 STK3Q13188 491 aa22.77■■□□□ 1.24
RPUSD3-202ENST00000418713 NTRK3Q16288 839 aa22.77■■□□□ 1.24
RPUSD3-202ENST00000418713 WWC2Q6AWC2 1192 aa22.77■■□□□ 1.24
RPUSD3-202ENST00000418713 TAPT1Q6NXT6 567 aa22.77■■□□□ 1.24
RPUSD3-202ENST00000418713 FBXO16Q8IX29 292 aaPredicted RBP22.77■■□□□ 1.24
RPUSD3-202ENST00000418713 BICD2Q8TD16 824 aa22.77■■□□□ 1.24
RPUSD3-202ENST00000418713 PAWRQ96IZ0 340 aaKnown RBP22.77■■□□□ 1.24
RPUSD3-202ENST00000418713 ZSCAN31Q96LW9 406 aaPredicted RBP22.77■■□□□ 1.24
RPUSD3-202ENST00000418713 PDCD2LQ9BRP1 358 aa22.77■■□□□ 1.24
RPUSD3-202ENST00000418713 WDR11Q9BZH6 1224 aa22.77■■□□□ 1.24
RPUSD3-202ENST00000418713 RIC8AQ9NPQ8 531 aa22.77■■□□□ 1.24
RPUSD3-202ENST00000418713 SH3GLB2Q9NR46 395 aa22.77■■□□□ 1.24
RPUSD3-202ENST00000418713 COL20A1Q9P218 1284 aa22.77■■□□□ 1.24
RPUSD3-202ENST00000418713 TPCN1Q9ULQ1 816 aa22.77■■□□□ 1.24
RPUSD3-202ENST00000418713 MCM3APO60318 1980 aa22.76■■□□□ 1.23
RPUSD3-202ENST00000418713 ST18O60284 1047 aa22.76■■□□□ 1.23
RPUSD3-202ENST00000418713 GNPTABQ3T906 1256 aa22.76■■□□□ 1.23
RPUSD3-202ENST00000418713 DUSP28Q4G0W2 176 aa22.76■■□□□ 1.23
RPUSD3-202ENST00000418713 VSIG10LQ86VR7 867 aa22.76■■□□□ 1.23
RPUSD3-202ENST00000418713 WASF1Q92558 559 aa22.76■■□□□ 1.23
RPUSD3-202ENST00000418713 GPKOWQ92917 476 aaPredicted RBP eCLIP22.76■■□□□ 1.23
RPUSD3-202ENST00000418713 LIMCH1Q9UPQ0 1083 aa22.76■■□□□ 1.23
RPUSD3-202ENST00000418713 ESYT2A0FGR8 921 aa22.75■■□□□ 1.23
RPUSD3-202ENST00000418713 MEIS2O14770 477 aa22.75■■□□□ 1.23
RPUSD3-202ENST00000418713 MYCNP04198 464 aaPredicted RBP22.75■■□□□ 1.23
RPUSD3-202ENST00000418713 MYCLP12524 364 aaPredicted RBP22.75■■□□□ 1.23
RPUSD3-202ENST00000418713 ADCYAP1R1P41586 468 aa22.75■■□□□ 1.23
RPUSD3-202ENST00000418713 GJA9P57773 515 aa22.75■■□□□ 1.23
RPUSD3-202ENST00000418713 PGM5Q15124 567 aa22.75■■□□□ 1.23
RPUSD3-202ENST00000418713 LRRC41Q15345 812 aa22.75■■□□□ 1.23
RPUSD3-202ENST00000418713 ANO1Q5XXA6 986 aa22.75■■□□□ 1.23
RPUSD3-202ENST00000418713 UBE2Q1Q7Z7E8 422 aa22.75■■□□□ 1.23
RPUSD3-202ENST00000418713 PHKBQ93100 1093 aa22.75■■□□□ 1.23
RPUSD3-202ENST00000418713 LARP6Q9BRS8 491 aaKnown RBP22.75■■□□□ 1.23
RPUSD3-202ENST00000418713 NCOA5Q9HCD5 579 aaKnown RBP22.75■■□□□ 1.23
RPUSD3-202ENST00000418713 MOXD2PA6NHM9 499 aa22.74■■□□□ 1.23
RPUSD3-202ENST00000418713 STXBP3O00186 592 aa22.74■■□□□ 1.23
RPUSD3-202ENST00000418713 TGFB3P10600 412 aa22.74■■□□□ 1.23
RPUSD3-202ENST00000418713 AP3B2Q13367 1082 aa22.74■■□□□ 1.23
RPUSD3-202ENST00000418713 USP17L6PQ6QN14 398 aa22.74■■□□□ 1.23
RPUSD3-202ENST00000418713 CENPFP49454 3210 aa22.74■■□□□ 1.23
RPUSD3-202ENST00000418713 C6orf222P0C671 652 aaPredicted RBP22.73■■□□□ 1.23
RPUSD3-202ENST00000418713 TXNP10599 105 aaKnown RBP22.73■■□□□ 1.23
RPUSD3-202ENST00000418713 SMPD1P17405 629 aa22.73■■□□□ 1.23
RPUSD3-202ENST00000418713 CST5P28325 142 aaPredicted RBP22.73■■□□□ 1.23
RPUSD3-202ENST00000418713 NKX3-2P78367 333 aa22.73■■□□□ 1.23
RPUSD3-202ENST00000418713 SCRN1Q12765 414 aa22.73■■□□□ 1.23
RPUSD3-202ENST00000418713 GJC2Q5T442 439 aaPredicted RBP22.73■■□□□ 1.23
RPUSD3-202ENST00000418713 GALNT17Q6IS24 598 aa22.73■■□□□ 1.23
RPUSD3-202ENST00000418713 SEPT14Q6ZU15 432 aa22.73■■□□□ 1.23
RPUSD3-202ENST00000418713 DPF3Q92784 378 aa22.73■■□□□ 1.23
RPUSD3-202ENST00000418713 BACH2Q9BYV9 841 aa22.73■■□□□ 1.23
RPUSD3-202ENST00000418713 ZMYND12Q9H0C1 365 aa22.73■■□□□ 1.23
RPUSD3-202ENST00000418713 UPF3AQ9H1J1 476 aaKnown RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms