RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 COL4A4P53420 1690 aaPredicted RBP15.57■□□□□ 0.08
CTHRC1-202ENST00000415886 SCN10AQ9Y5Y9 1956 aa15.56■□□□□ 0.08
CTHRC1-202ENST00000415886 RANBP6O60518 1105 aaKnown RBP15.56■□□□□ 0.08
CTHRC1-202ENST00000415886 CALML3P27482 149 aa15.56■□□□□ 0.08
CTHRC1-202ENST00000415886 PPP2R5BQ15173 497 aa15.56■□□□□ 0.08
CTHRC1-202ENST00000415886 SYDE2Q5VT97 1194 aa15.56■□□□□ 0.08
CTHRC1-202ENST00000415886 PHOSPHO2Q8TCD6 241 aa15.56■□□□□ 0.08
CTHRC1-202ENST00000415886 COPS5Q92905 334 aa15.56■□□□□ 0.08
CTHRC1-202ENST00000415886 FTOQ9C0B1 505 aaKnown RBP eCLIP15.56■□□□□ 0.08
CTHRC1-202ENST00000415886 REV3LO60673 3130 aa15.56■□□□□ 0.08
CTHRC1-202ENST00000415886 RAD50Q92878 1312 aa15.55■□□□□ 0.08
CTHRC1-202ENST00000415886 LOC102724159A0A0B4J2E5 919 aa15.55■□□□□ 0.08
CTHRC1-202ENST00000415886 PITPNM1O00562 1244 aa15.55■□□□□ 0.08
CTHRC1-202ENST00000415886 TLL1O43897 1013 aa15.55■□□□□ 0.08
CTHRC1-202ENST00000415886 NOVP48745 357 aa15.55■□□□□ 0.08
CTHRC1-202ENST00000415886 GRB10Q13322 594 aa15.55■□□□□ 0.08
CTHRC1-202ENST00000415886 PWP2Q15269 919 aaKnown RBP15.55■□□□□ 0.08
CTHRC1-202ENST00000415886 NFRKBQ6P4R8 1299 aa15.55■□□□□ 0.08
CTHRC1-202ENST00000415886 BTNL9Q6UXG8 535 aa15.55■□□□□ 0.08
CTHRC1-202ENST00000415886 RETREG2Q8NC44 543 aa15.55■□□□□ 0.08
CTHRC1-202ENST00000415886 CLEC4DQ8WXI8 215 aa15.55■□□□□ 0.08
CTHRC1-202ENST00000415886 LRFN3Q9BTN0 628 aa15.55■□□□□ 0.08
CTHRC1-202ENST00000415886 OSBPL3Q9H4L5 887 aa15.55■□□□□ 0.08
CTHRC1-202ENST00000415886 GPCPD1Q9NPB8 672 aa15.55■□□□□ 0.08
CTHRC1-202ENST00000415886 DIAPH3Q9NSV4 1193 aa15.55■□□□□ 0.08
CTHRC1-202ENST00000415886 COG5Q9UP83 839 aa15.55■□□□□ 0.08
CTHRC1-202ENST00000415886 XIRP2A4UGR9 3374 aa15.55■□□□□ 0.08
CTHRC1-202ENST00000415886 PRRC2BQ5JSZ5 2229 aaKnown RBP15.55■□□□□ 0.08
CTHRC1-202ENST00000415886 PTPRSQ13332 1948 aa15.55■□□□□ 0.08
CTHRC1-202ENST00000415886 HIP1O00291 1037 aa15.54■□□□□ 0.08
CTHRC1-202ENST00000415886 SDSP20132 328 aa15.54■□□□□ 0.08
CTHRC1-202ENST00000415886 CHMP4BP1P59074 171 aa15.54■□□□□ 0.08
CTHRC1-202ENST00000415886 PDE4DQ08499 809 aa15.54■□□□□ 0.08
CTHRC1-202ENST00000415886 BRDTQ58F21 947 aaPredicted RBP15.54■□□□□ 0.08
CTHRC1-202ENST00000415886 VPS53Q5VIR6 699 aa15.54■□□□□ 0.08
CTHRC1-202ENST00000415886 RNF207Q6ZRF8 634 aa15.54■□□□□ 0.08
CTHRC1-202ENST00000415886 HLA-CQ95604 372 aa15.54■□□□□ 0.08
CTHRC1-202ENST00000415886 FAM227BQ96M60 508 aa15.54■□□□□ 0.08
CTHRC1-202ENST00000415886 TOMM22Q9NS69 142 aa15.54■□□□□ 0.08
CTHRC1-202ENST00000415886 LCHNA4D1U4 455 aa15.53■□□□□ 0.08
CTHRC1-202ENST00000415886 A6NJR5 290 aa15.53■□□□□ 0.08
CTHRC1-202ENST00000415886 KIF28PB7ZC32 967 aa15.53■□□□□ 0.08
CTHRC1-202ENST00000415886 NKRFO15226 690 aaKnown RBP eCLIP15.53■□□□□ 0.08
CTHRC1-202ENST00000415886 LPXNO60711 386 aa15.53■□□□□ 0.08
CTHRC1-202ENST00000415886 EDNRBP24530 442 aa15.53■□□□□ 0.08
CTHRC1-202ENST00000415886 HOXD11P31277 338 aaPredicted RBP15.53■□□□□ 0.08
CTHRC1-202ENST00000415886 RPS6P62753 249 aaKnown RBP15.53■□□□□ 0.08
CTHRC1-202ENST00000415886 PTPN11Q06124 597 aaPredicted RBP15.53■□□□□ 0.08
CTHRC1-202ENST00000415886 NMIQ13287 307 aaPredicted RBP15.53■□□□□ 0.08
CTHRC1-202ENST00000415886 BFSP2Q13515 415 aa15.53■□□□□ 0.08
CTHRC1-202ENST00000415886 TMCO2Q7Z6W1 182 aaPredicted RBP15.53■□□□□ 0.08
CTHRC1-202ENST00000415886 SCFD2Q8WU76 684 aa15.53■□□□□ 0.08
CTHRC1-202ENST00000415886 KHSRPQ92945 711 aaKnown RBP eCLIP15.53■□□□□ 0.08
CTHRC1-202ENST00000415886 TMEM47Q9BQJ4 181 aa15.53■□□□□ 0.08
CTHRC1-202ENST00000415886 ANAPC4Q9UJX5 808 aa15.53■□□□□ 0.08
CTHRC1-202ENST00000415886 NOD1Q9Y239 953 aa15.53■□□□□ 0.08
CTHRC1-202ENST00000415886 RBAK-RBAKDNI3L0D1 243 aa15.52■□□□□ 0.08
CTHRC1-202ENST00000415886 ORC4O43929 436 aa15.52■□□□□ 0.08
CTHRC1-202ENST00000415886 KPNA6O60684 536 aa15.52■□□□□ 0.08
CTHRC1-202ENST00000415886 BAIAP3O94812 1187 aa15.52■□□□□ 0.08
CTHRC1-202ENST00000415886 ARIH2O95376 493 aa15.52■□□□□ 0.08
CTHRC1-202ENST00000415886 TXNP10599 105 aaKnown RBP15.52■□□□□ 0.08
CTHRC1-202ENST00000415886 KCNJ6P48051 423 aa15.52■□□□□ 0.08
CTHRC1-202ENST00000415886 PTGISQ16647 500 aa15.52■□□□□ 0.08
CTHRC1-202ENST00000415886 RRP12Q5JTH9 1297 aaKnown RBP15.52■□□□□ 0.08
CTHRC1-202ENST00000415886 GDPD5Q8WTR4 605 aa15.52■□□□□ 0.08
CTHRC1-202ENST00000415886 HCN4Q9Y3Q4 1203 aa15.52■□□□□ 0.08
CTHRC1-202ENST00000415886 A0A0D9SFI3 127 aa15.51■□□□□ 0.07
CTHRC1-202ENST00000415886 FGAP02671 866 aa15.51■□□□□ 0.07
CTHRC1-202ENST00000415886 PDHBP11177 359 aa15.51■□□□□ 0.07
CTHRC1-202ENST00000415886 TOP1P11387 765 aaKnown RBP15.51■□□□□ 0.07
CTHRC1-202ENST00000415886 WDR5P61964 334 aaKnown RBP15.51■□□□□ 0.07
CTHRC1-202ENST00000415886 GPNMBQ14956 572 aa15.51■□□□□ 0.07
CTHRC1-202ENST00000415886 ALX1Q15699 326 aa15.51■□□□□ 0.07
CTHRC1-202ENST00000415886 TMEM31Q5JXX7 168 aa15.51■□□□□ 0.07
CTHRC1-202ENST00000415886 CWC27Q6UX04 472 aaKnown RBP15.51■□□□□ 0.07
CTHRC1-202ENST00000415886 TET1Q8NFU7 2136 aa15.51■□□□□ 0.07
CTHRC1-202ENST00000415886 CTAGE1Q96RT6 745 aa15.51■□□□□ 0.07
CTHRC1-202ENST00000415886 MPHOSPH6Q99547 160 aaKnown RBP15.51■□□□□ 0.07
CTHRC1-202ENST00000415886 FAM86C2PA6NEL3 165 aa15.5■□□□□ 0.07
CTHRC1-202ENST00000415886 FGRP09769 529 aa15.5■□□□□ 0.07
CTHRC1-202ENST00000415886 HSPD1P10809 573 aaKnown RBP15.5■□□□□ 0.07
CTHRC1-202ENST00000415886 DEFB103AP81534 67 aa15.5■□□□□ 0.07
CTHRC1-202ENST00000415886 GDF6Q6KF10 455 aaPredicted RBP15.5■□□□□ 0.07
CTHRC1-202ENST00000415886 DNERQ8NFT8 737 aa15.5■□□□□ 0.07
CTHRC1-202ENST00000415886 AFAP1L1Q8TED9 768 aa15.5■□□□□ 0.07
CTHRC1-202ENST00000415886 C11orf16Q9NQ32 467 aa15.5■□□□□ 0.07
CTHRC1-202ENST00000415886 CCDC171Q6TFL3 1326 aa15.49■□□□□ 0.07
CTHRC1-202ENST00000415886 WDR19Q8NEZ3 1342 aa15.49■□□□□ 0.07
CTHRC1-202ENST00000415886 MMP3P08254 477 aa15.49■□□□□ 0.07
CTHRC1-202ENST00000415886 TCTN1Q2MV58 587 aa15.49■□□□□ 0.07
CTHRC1-202ENST00000415886 USH1GQ495M9 461 aa15.49■□□□□ 0.07
CTHRC1-202ENST00000415886 CCDC155Q8N6L0 562 aa15.49■□□□□ 0.07
CTHRC1-202ENST00000415886 CAGE1Q8TC20 777 aa15.49■□□□□ 0.07
CTHRC1-202ENST00000415886 AFG1LQ8WV93 481 aa15.49■□□□□ 0.07
CTHRC1-202ENST00000415886 DHX38Q92620 1227 aaKnown RBP15.49■□□□□ 0.07
CTHRC1-202ENST00000415886 ZBED2Q9BTP6 218 aa15.49■□□□□ 0.07
CTHRC1-202ENST00000415886 CD320Q9NPF0 282 aa15.49■□□□□ 0.07
CTHRC1-202ENST00000415886 MTUS1Q9ULD2 1270 aa15.49■□□□□ 0.07
CTHRC1-202ENST00000415886 ZNF213O14771 459 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms