RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 NUDT12Q9BQG2 462 aa16.58■□□□□ 0.24
SGCE-202ENST00000415788 TSPY26PQ9H489 355 aa16.58■□□□□ 0.24
SGCE-202ENST00000415788 BRMS1Q9HCU9 246 aa16.58■□□□□ 0.24
SGCE-202ENST00000415788 FAM13BQ9NYF5 915 aa16.58■□□□□ 0.24
SGCE-202ENST00000415788 PCDHA4Q9UN74 947 aa16.58■□□□□ 0.24
SGCE-202ENST00000415788 FOXN1O15353 648 aa16.57■□□□□ 0.24
SGCE-202ENST00000415788 HSPA8P11142 646 aaKnown RBP16.57■□□□□ 0.24
SGCE-202ENST00000415788 ADORA2AP29274 412 aa16.57■□□□□ 0.24
SGCE-202ENST00000415788 RBM10P98175 930 aaKnown RBP16.57■□□□□ 0.24
SGCE-202ENST00000415788 BAATQ14032 418 aaPredicted RBP16.57■□□□□ 0.24
SGCE-202ENST00000415788 MORN1Q5T089 497 aa16.57■□□□□ 0.24
SGCE-202ENST00000415788 KRT40Q6A162 431 aa16.57■□□□□ 0.24
SGCE-202ENST00000415788 ARHGAP39Q9C0H5 1083 aa16.57■□□□□ 0.24
SGCE-202ENST00000415788 MYH6P13533 1939 aa16.57■□□□□ 0.24
SGCE-202ENST00000415788 DNAJC25-GNG10A0A024R161 153 aa16.56■□□□□ 0.24
SGCE-202ENST00000415788 POTEB2H3BUK9 544 aa16.56■□□□□ 0.24
SGCE-202ENST00000415788 MEIS2O14770 477 aa16.56■□□□□ 0.24
SGCE-202ENST00000415788 MMP1P03956 469 aa16.56■□□□□ 0.24
SGCE-202ENST00000415788 CTGFP29279 349 aa16.56■□□□□ 0.24
SGCE-202ENST00000415788 MAP2K5Q13163 448 aa16.56■□□□□ 0.24
SGCE-202ENST00000415788 AP3B2Q13367 1082 aa16.56■□□□□ 0.24
SGCE-202ENST00000415788 SAFBQ15424 915 aaKnown RBP eCLIP16.56■□□□□ 0.24
SGCE-202ENST00000415788 LARP1BQ659C4 914 aaKnown RBP16.56■□□□□ 0.24
SGCE-202ENST00000415788 REXO1Q8N1G1 1221 aaKnown RBP16.56■□□□□ 0.24
SGCE-202ENST00000415788 SHISA4Q96DD7 197 aa16.56■□□□□ 0.24
SGCE-202ENST00000415788 DIS3Q9Y2L1 958 aaKnown RBP16.56■□□□□ 0.24
SGCE-202ENST00000415788 H3BQV1 296 aa16.56■□□□□ 0.24
SGCE-202ENST00000415788 FOSP01100 380 aaPredicted RBP16.56■□□□□ 0.24
SGCE-202ENST00000415788 RGS2P41220 211 aa16.56■□□□□ 0.24
SGCE-202ENST00000415788 PRMT2P55345 433 aa16.56■□□□□ 0.24
SGCE-202ENST00000415788 IFFO2Q5TF58 517 aa16.56■□□□□ 0.24
SGCE-202ENST00000415788 SLC30A10Q6XR72 485 aa16.56■□□□□ 0.24
SGCE-202ENST00000415788 DPP9Q86TI2 863 aa16.56■□□□□ 0.24
SGCE-202ENST00000415788 SMAP1Q8IYB5 467 aaPredicted RBP16.56■□□□□ 0.24
SGCE-202ENST00000415788 FAM133AQ8N9E0 248 aa16.56■□□□□ 0.24
SGCE-202ENST00000415788 SYTL5Q8TDW5 730 aaPredicted RBP16.56■□□□□ 0.24
SGCE-202ENST00000415788 ADD3Q9UEY8 706 aaKnown RBP16.56■□□□□ 0.24
SGCE-202ENST00000415788 GJD2Q9UKL4 321 aa16.56■□□□□ 0.24
SGCE-202ENST00000415788 KCNJ14Q9UNX9 436 aa16.56■□□□□ 0.24
SGCE-202ENST00000415788 SPDYE3A6NKU9 549 aa16.55■□□□□ 0.24
SGCE-202ENST00000415788 HOXC6P09630 235 aa16.55■□□□□ 0.24
SGCE-202ENST00000415788 HOXA13P31271 388 aaPredicted RBP16.55■□□□□ 0.24
SGCE-202ENST00000415788 CLK2P49760 499 aaKnown RBP16.55■□□□□ 0.24
SGCE-202ENST00000415788 USP17L6PQ6QN14 398 aa16.55■□□□□ 0.24
SGCE-202ENST00000415788 BLIDQ8IZY5 108 aa16.55■□□□□ 0.24
SGCE-202ENST00000415788 DNERQ8NFT8 737 aa16.55■□□□□ 0.24
SGCE-202ENST00000415788 TBC1D5Q92609 795 aa16.55■□□□□ 0.24
SGCE-202ENST00000415788 USP6NLQ92738 828 aa16.55■□□□□ 0.24
SGCE-202ENST00000415788 GJB4Q9NTQ9 266 aa16.55■□□□□ 0.24
SGCE-202ENST00000415788 SRRDQ9UH36 339 aa16.55■□□□□ 0.24
SGCE-202ENST00000415788 ZNF236Q9UL36 1845 aa16.55■□□□□ 0.24
SGCE-202ENST00000415788 LOC102724159A0A0B4J2E5 919 aa16.54■□□□□ 0.24
SGCE-202ENST00000415788 XRCC5P13010 732 aaKnown RBP16.54■□□□□ 0.24
SGCE-202ENST00000415788 KRT2P35908 639 aa16.54■□□□□ 0.24
SGCE-202ENST00000415788 PWP2Q15269 919 aaKnown RBP16.54■□□□□ 0.24
SGCE-202ENST00000415788 NPY5RQ15761 445 aa16.54■□□□□ 0.24
SGCE-202ENST00000415788 MPHOSPH6Q99547 160 aaKnown RBP16.54■□□□□ 0.24
SGCE-202ENST00000415788 APBA2Q99767 749 aa16.54■□□□□ 0.24
SGCE-202ENST00000415788 EHMT1Q9H9B1 1298 aa16.54■□□□□ 0.24
SGCE-202ENST00000415788 B4DLN1 442 aa16.54■□□□□ 0.24
SGCE-202ENST00000415788 ECM2O94769 699 aaPredicted RBP16.54■□□□□ 0.24
SGCE-202ENST00000415788 PGK2P07205 417 aa16.54■□□□□ 0.24
SGCE-202ENST00000415788 FOSBP53539 338 aa16.54■□□□□ 0.24
SGCE-202ENST00000415788 ZNF792Q3KQV3 632 aa16.54■□□□□ 0.24
SGCE-202ENST00000415788 ZNF467Q7Z7K2 595 aaPredicted RBP16.54■□□□□ 0.24
SGCE-202ENST00000415788 COBLO75128 1261 aa16.53■□□□□ 0.24
SGCE-202ENST00000415788 PTMAP06454 111 aaKnown RBP16.53■□□□□ 0.24
SGCE-202ENST00000415788 LBX1P52954 281 aa16.53■□□□□ 0.24
SGCE-202ENST00000415788 GUCY1B3Q02153 619 aa16.53■□□□□ 0.24
SGCE-202ENST00000415788 IRF5Q13568 498 aa16.53■□□□□ 0.24
SGCE-202ENST00000415788 UBE2SQ16763 222 aa16.53■□□□□ 0.24
SGCE-202ENST00000415788 FCHSD1Q86WN1 690 aa16.53■□□□□ 0.24
SGCE-202ENST00000415788 DIS3L2Q8IYB7 885 aaKnown RBP16.53■□□□□ 0.24
SGCE-202ENST00000415788 MSL3Q8N5Y2 521 aaKnown RBP16.53■□□□□ 0.24
SGCE-202ENST00000415788 NSUN6Q8TEA1 469 aaKnown RBP16.53■□□□□ 0.24
SGCE-202ENST00000415788 PRIMPOLQ96LW4 560 aa16.53■□□□□ 0.24
SGCE-202ENST00000415788 BIN2Q9UBW5 565 aaPredicted RBP16.53■□□□□ 0.24
SGCE-202ENST00000415788 M0R2N6 131 aa16.52■□□□□ 0.24
SGCE-202ENST00000415788 SYT1P21579 422 aa16.52■□□□□ 0.24
SGCE-202ENST00000415788 FLT3LGP49771 235 aa16.52■□□□□ 0.24
SGCE-202ENST00000415788 CAP1Q01518 475 aa16.52■□□□□ 0.24
SGCE-202ENST00000415788 PRKCZQ05513 592 aa16.52■□□□□ 0.24
SGCE-202ENST00000415788 OTOP1Q7RTM1 612 aa16.52■□□□□ 0.24
SGCE-202ENST00000415788 KRT25Q7Z3Z0 450 aa16.52■□□□□ 0.24
SGCE-202ENST00000415788 TRMT44Q8IYL2 757 aaKnown RBP16.52■□□□□ 0.24
SGCE-202ENST00000415788 RMDN3Q96TC7 470 aa16.52■□□□□ 0.24
SGCE-202ENST00000415788 FOXP1Q9H334 677 aaPredicted RBP16.52■□□□□ 0.24
SGCE-202ENST00000415788 COL20A1Q9P218 1284 aa16.52■□□□□ 0.24
SGCE-202ENST00000415788 PCDHA6Q9UN73 950 aa16.52■□□□□ 0.24
SGCE-202ENST00000415788 PCDHA8Q9Y5H6 950 aa16.52■□□□□ 0.24
SGCE-202ENST00000415788 RBBP6Q7Z6E9 1792 aaKnown RBP16.52■□□□□ 0.24
SGCE-202ENST00000415788 SMCHD1A6NHR9 2005 aa16.52■□□□□ 0.23
SGCE-202ENST00000415788 CNTN2Q02246 1040 aa16.52■□□□□ 0.23
SGCE-202ENST00000415788 IWS1Q96ST2 819 aa16.52■□□□□ 0.23
SGCE-202ENST00000415788 TRIM17Q9Y577 477 aa16.52■□□□□ 0.23
SGCE-202ENST00000415788 FRMPD4Q14CM0 1322 aa16.52■□□□□ 0.23
SGCE-202ENST00000415788 PLXNB2O15031 1838 aa16.51■□□□□ 0.23
SGCE-202ENST00000415788 ASB14A6NK59 587 aa16.51■□□□□ 0.23
SGCE-202ENST00000415788 STX6O43752 255 aa16.51■□□□□ 0.23
SGCE-202ENST00000415788 LETM1O95202 739 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms