RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 DBNDD2Q9BQY9 259 aa7.97□□□□□ -1.13
EPHA4-204ENST00000415749 ACTR10Q9NZ32 417 aa7.97□□□□□ -1.13
EPHA4-204ENST00000415749 CD2APQ9Y5K6 639 aa7.97□□□□□ -1.13
EPHA4-204ENST00000415749 BRD4O60885 1362 aaPredicted RBP7.97□□□□□ -1.13
EPHA4-204ENST00000415749 ITSN1Q15811 1721 aa7.96□□□□□ -1.14
EPHA4-204ENST00000415749 TOMM70O94826 608 aa7.96□□□□□ -1.14
EPHA4-204ENST00000415749 PDGFRBP09619 1106 aa7.96□□□□□ -1.14
EPHA4-204ENST00000415749 FAM87AP0C7U9 286 aa7.96□□□□□ -1.14
EPHA4-204ENST00000415749 CYP7A1P22680 504 aa7.96□□□□□ -1.14
EPHA4-204ENST00000415749 MASP1P48740 699 aa7.96□□□□□ -1.14
EPHA4-204ENST00000415749 NFIAQ12857 509 aa7.96□□□□□ -1.14
EPHA4-204ENST00000415749 PPP2R5EQ16537 467 aa7.96□□□□□ -1.14
EPHA4-204ENST00000415749 OGFOD3Q6PK18 319 aa7.96□□□□□ -1.14
EPHA4-204ENST00000415749 COL23A1Q86Y22 540 aaPredicted RBP7.96□□□□□ -1.14
EPHA4-204ENST00000415749 FAM169BQ8N8A8 192 aa7.96□□□□□ -1.14
EPHA4-204ENST00000415749 KCNH5Q8NCM2 988 aa7.96□□□□□ -1.14
EPHA4-204ENST00000415749 DHRS1Q96LJ7 313 aa7.96□□□□□ -1.14
EPHA4-204ENST00000415749 KIF2CQ99661 725 aa7.96□□□□□ -1.14
EPHA4-204ENST00000415749 METTL22Q9BUU2 404 aaPredicted RBP7.96□□□□□ -1.14
EPHA4-204ENST00000415749 DUSP23Q9BVJ7 150 aa7.96□□□□□ -1.14
EPHA4-204ENST00000415749 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.96□□□□□ -1.14
EPHA4-204ENST00000415749 CEP131Q9UPN4 1083 aa7.96□□□□□ -1.14
EPHA4-204ENST00000415749 CCDC7Q96M83 1385 aa7.96□□□□□ -1.14
EPHA4-204ENST00000415749 PDPK1O15530 556 aa7.95□□□□□ -1.14
EPHA4-204ENST00000415749 IGLV1-40P01703 118 aa7.95□□□□□ -1.14
EPHA4-204ENST00000415749 SQSTM1Q13501 440 aa7.95□□□□□ -1.14
EPHA4-204ENST00000415749 DDR2Q16832 855 aa7.95□□□□□ -1.14
EPHA4-204ENST00000415749 TAF7LQ5H9L4 462 aa7.95□□□□□ -1.14
EPHA4-204ENST00000415749 DUSP27Q5VZP5 1158 aa7.95□□□□□ -1.14
EPHA4-204ENST00000415749 RUFY4Q6ZNE9 571 aa7.95□□□□□ -1.14
EPHA4-204ENST00000415749 C16orf86Q6ZW13 317 aa7.95□□□□□ -1.14
EPHA4-204ENST00000415749 TTC6Q86TZ1 520 aa7.95□□□□□ -1.14
EPHA4-204ENST00000415749 COX4I2Q96KJ9 171 aa7.95□□□□□ -1.14
EPHA4-204ENST00000415749 MFSD14AQ96MC6 490 aa7.95□□□□□ -1.14
EPHA4-204ENST00000415749 ATG3Q9NT62 314 aa7.95□□□□□ -1.14
EPHA4-204ENST00000415749 TMEM260Q9NX78 707 aa7.95□□□□□ -1.14
EPHA4-204ENST00000415749 LEMD3Q9Y2U8 911 aa7.95□□□□□ -1.14
EPHA4-204ENST00000415749 ADCY9O60503 1353 aa7.95□□□□□ -1.14
EPHA4-204ENST00000415749 AKAP12Q02952 1782 aa7.94□□□□□ -1.14
EPHA4-204ENST00000415749 CCDC194A0A1B0GVG4 234 aa7.94□□□□□ -1.14
EPHA4-204ENST00000415749 PEX14O75381 377 aa7.94□□□□□ -1.14
EPHA4-204ENST00000415749 SLITRK5O94991 958 aa7.94□□□□□ -1.14
EPHA4-204ENST00000415749 IL2RBP14784 551 aa7.94□□□□□ -1.14
EPHA4-204ENST00000415749 FSTP19883 344 aa7.94□□□□□ -1.14
EPHA4-204ENST00000415749 CPSF6Q16630 551 aaKnown RBP eCLIP7.94□□□□□ -1.14
EPHA4-204ENST00000415749 RSPO4Q2I0M5 234 aaPredicted RBP7.94□□□□□ -1.14
EPHA4-204ENST00000415749 NKAPLQ5M9Q1 402 aa7.94□□□□□ -1.14
EPHA4-204ENST00000415749 GORABQ5T7V8 394 aa7.94□□□□□ -1.14
EPHA4-204ENST00000415749 FMNL3Q8IVF7 1028 aa7.94□□□□□ -1.14
EPHA4-204ENST00000415749 FBXL6Q8N531 539 aa7.94□□□□□ -1.14
EPHA4-204ENST00000415749 BAHD1Q8TBE0 780 aaPredicted RBP7.94□□□□□ -1.14
EPHA4-204ENST00000415749 JDP2Q8WYK2 163 aa7.94□□□□□ -1.14
EPHA4-204ENST00000415749 SLC9A7Q96T83 725 aa7.94□□□□□ -1.14
EPHA4-204ENST00000415749 PHAXQ9H814 394 aaKnown RBP7.94□□□□□ -1.14
EPHA4-204ENST00000415749 GTF2IRD1Q9UHL9 959 aa7.94□□□□□ -1.14
EPHA4-204ENST00000415749 TPX2Q9ULW0 747 aaKnown RBP7.94□□□□□ -1.14
EPHA4-204ENST00000415749 PPIP5K1Q6PFW1 1433 aa7.94□□□□□ -1.14
EPHA4-204ENST00000415749 COL18A1P39060 1754 aa7.93□□□□□ -1.14
EPHA4-204ENST00000415749 A0A1W2PQH9 124 aa7.93□□□□□ -1.14
EPHA4-204ENST00000415749 CLEC3AO75596 197 aa7.93□□□□□ -1.14
EPHA4-204ENST00000415749 RNF4P78317 190 aa7.93□□□□□ -1.14
EPHA4-204ENST00000415749 RASGRF1Q13972 1273 aa7.93□□□□□ -1.14
EPHA4-204ENST00000415749 TKFCQ3LXA3 575 aa7.93□□□□□ -1.14
EPHA4-204ENST00000415749 BBS9Q3SYG4 887 aa7.93□□□□□ -1.14
EPHA4-204ENST00000415749 UNC5AQ6ZN44 842 aa7.93□□□□□ -1.14
EPHA4-204ENST00000415749 EXOC8Q8IYI6 725 aa7.93□□□□□ -1.14
EPHA4-204ENST00000415749 JMYQ8N9B5 988 aa7.93□□□□□ -1.14
EPHA4-204ENST00000415749 DNAJB8Q8NHS0 232 aa7.93□□□□□ -1.14
EPHA4-204ENST00000415749 GATA6Q92908 595 aa7.93□□□□□ -1.14
EPHA4-204ENST00000415749 SYTL4Q96C24 671 aaPredicted RBP7.93□□□□□ -1.14
EPHA4-204ENST00000415749 FEZ1Q99689 392 aa7.93□□□□□ -1.14
EPHA4-204ENST00000415749 OSBPL1AQ9BXW6 950 aa7.93□□□□□ -1.14
EPHA4-204ENST00000415749 PRDM5Q9NQX1 630 aaPredicted RBP7.93□□□□□ -1.14
EPHA4-204ENST00000415749 GABBR1Q9UBS5 961 aa7.93□□□□□ -1.14
EPHA4-204ENST00000415749 MAPK8IP1Q9UQF2 711 aa7.93□□□□□ -1.14
EPHA4-204ENST00000415749 PAPPAQ13219 1627 aa7.92□□□□□ -1.14
EPHA4-204ENST00000415749 GOLGB1Q14789 3259 aaKnown RBP7.92□□□□□ -1.14
EPHA4-204ENST00000415749 DYRK3O43781 588 aa7.92□□□□□ -1.14
EPHA4-204ENST00000415749 UBOX5O94941 541 aa7.92□□□□□ -1.14
EPHA4-204ENST00000415749 ACRP10323 421 aa7.92□□□□□ -1.14
EPHA4-204ENST00000415749 POLR2BP30876 1174 aaKnown RBP7.92□□□□□ -1.14
EPHA4-204ENST00000415749 ADMP35318 185 aa7.92□□□□□ -1.14
EPHA4-204ENST00000415749 HTRA3P83110 453 aa7.92□□□□□ -1.14
EPHA4-204ENST00000415749 FXNQ16595 210 aa7.92□□□□□ -1.14
EPHA4-204ENST00000415749 CDH24Q86UP0 819 aa7.92□□□□□ -1.14
EPHA4-204ENST00000415749 FERMT3Q86UX7 667 aa7.92□□□□□ -1.14
EPHA4-204ENST00000415749 PPP1R13LQ8WUF5 828 aa7.92□□□□□ -1.14
EPHA4-204ENST00000415749 TYW1Q9NV66 732 aaKnown RBP7.92□□□□□ -1.14
EPHA4-204ENST00000415749 TNS2Q63HR2 1409 aa7.92□□□□□ -1.14
EPHA4-204ENST00000415749 TOPAZ1Q8N9V7 1692 aa7.92□□□□□ -1.14
EPHA4-204ENST00000415749 COL24A1Q17RW2 1714 aa7.92□□□□□ -1.14
EPHA4-204ENST00000415749 LEFTY1O75610 366 aa7.91□□□□□ -1.14
EPHA4-204ENST00000415749 F13BP05160 661 aa7.91□□□□□ -1.14
EPHA4-204ENST00000415749 MTERF2Q49AM1 385 aa7.91□□□□□ -1.14
EPHA4-204ENST00000415749 PRPF38AQ8NAV1 312 aaKnown RBP7.91□□□□□ -1.14
EPHA4-204ENST00000415749 RNF141Q8WVD5 230 aa7.91□□□□□ -1.14
EPHA4-204ENST00000415749 SMARCC1Q92922 1105 aaPredicted RBP7.91□□□□□ -1.14
EPHA4-204ENST00000415749 SLC6A18Q96N87 628 aa7.91□□□□□ -1.14
EPHA4-204ENST00000415749 IER2Q9BTL4 223 aa7.91□□□□□ -1.14
EPHA4-204ENST00000415749 ASPNQ9BXN1 380 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms