RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 KIF11P52732 1056 aa20.02■□□□□ 0.8
SCARB1-203ENST00000415380 CCDC70Q6NSX1 233 aa20.02■□□□□ 0.8
SCARB1-203ENST00000415380 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.02■□□□□ 0.8
SCARB1-203ENST00000415380 AMOTL1Q8IY63 956 aa20.02■□□□□ 0.8
SCARB1-203ENST00000415380 TGFBRAP1Q8WUH2 860 aa20.02■□□□□ 0.8
SCARB1-203ENST00000415380 NDST4Q9H3R1 872 aa20.02■□□□□ 0.8
SCARB1-203ENST00000415380 C6orf50Q9HD87 102 aa20.02■□□□□ 0.8
SCARB1-203ENST00000415380 FAM184BQ9ULE4 1060 aa20.02■□□□□ 0.8
SCARB1-203ENST00000415380 EIF4A3P38919 411 aaKnown RBP20.02■□□□□ 0.79
SCARB1-203ENST00000415380 KCNQ4P56696 695 aa20.02■□□□□ 0.79
SCARB1-203ENST00000415380 DIXDC1Q155Q3 683 aa20.02■□□□□ 0.79
SCARB1-203ENST00000415380 ZNF572Q7Z3I7 529 aaPredicted RBP20.02■□□□□ 0.79
SCARB1-203ENST00000415380 HDAC7Q8WUI4 952 aa20.02■□□□□ 0.79
SCARB1-203ENST00000415380 CALML4Q96GE6 196 aa20.02■□□□□ 0.79
SCARB1-203ENST00000415380 LRRC1Q9BTT6 524 aa20.02■□□□□ 0.79
SCARB1-203ENST00000415380 VGLL3A8MV65 326 aa20.01■□□□□ 0.79
SCARB1-203ENST00000415380 POTEDQ86YR6 584 aa20.01■□□□□ 0.79
SCARB1-203ENST00000415380 TBCKQ8TEA7 893 aa20.01■□□□□ 0.79
SCARB1-203ENST00000415380 SAP30BPQ9UHR5 308 aaKnown RBP20.01■□□□□ 0.79
SCARB1-203ENST00000415380 LCA5LO95447 670 aa20.01■□□□□ 0.79
SCARB1-203ENST00000415380 GNA11P29992 359 aa20.01■□□□□ 0.79
SCARB1-203ENST00000415380 SV2BQ7L1I2 683 aa20.01■□□□□ 0.79
SCARB1-203ENST00000415380 DEF6Q9H4E7 631 aa20.01■□□□□ 0.79
SCARB1-203ENST00000415380 MMRN2Q9H8L6 949 aa20.01■□□□□ 0.79
SCARB1-203ENST00000415380 GOLGA6BA6NDN3 693 aa20■□□□□ 0.79
SCARB1-203ENST00000415380 PRLRP16471 622 aa20■□□□□ 0.79
SCARB1-203ENST00000415380 GRB10Q13322 594 aa20■□□□□ 0.79
SCARB1-203ENST00000415380 GRIK5Q16478 980 aa20■□□□□ 0.79
SCARB1-203ENST00000415380 GPIHBP1Q8IV16 184 aa20■□□□□ 0.79
SCARB1-203ENST00000415380 SPATA4Q8NEY3 305 aa20■□□□□ 0.79
SCARB1-203ENST00000415380 BLOC1S4Q9NUP1 217 aa20■□□□□ 0.79
SCARB1-203ENST00000415380 DMGDHQ9UI17 866 aaKnown RBP20■□□□□ 0.79
SCARB1-203ENST00000415380 MYMKA6NI61 221 aa20■□□□□ 0.79
SCARB1-203ENST00000415380 PPFIA4O75335 1185 aa20■□□□□ 0.79
SCARB1-203ENST00000415380 TXKP42681 527 aa20■□□□□ 0.79
SCARB1-203ENST00000415380 ITIH3Q06033 890 aa20■□□□□ 0.79
SCARB1-203ENST00000415380 NFRKBQ6P4R8 1299 aa20■□□□□ 0.79
SCARB1-203ENST00000415380 MAPKAPK5Q8IW41 473 aa20■□□□□ 0.79
SCARB1-203ENST00000415380 OSBPL9Q96SU4 736 aa20■□□□□ 0.79
SCARB1-203ENST00000415380 THRAP3Q9Y2W1 955 aaKnown RBP20■□□□□ 0.79
SCARB1-203ENST00000415380 LRRC53A6NM62 1247 aa19.99■□□□□ 0.79
SCARB1-203ENST00000415380 MAN2A1Q16706 1144 aa19.99■□□□□ 0.79
SCARB1-203ENST00000415380 USP17L2Q6R6M4 530 aa19.99■□□□□ 0.79
SCARB1-203ENST00000415380 SND1Q7KZF4 910 aaKnown RBP eCLIP19.99■□□□□ 0.799e-10■■■■□ 25.5
SCARB1-203ENST00000415380 NYXQ9GZU5 481 aa19.99■□□□□ 0.79
SCARB1-203ENST00000415380 BIN2Q9UBW5 565 aaPredicted RBP19.99■□□□□ 0.79
SCARB1-203ENST00000415380 AKR1B10O60218 316 aa19.99■□□□□ 0.79
SCARB1-203ENST00000415380 BAG3O95817 575 aa19.99■□□□□ 0.79
SCARB1-203ENST00000415380 SOGA3Q5TF21 947 aa19.99■□□□□ 0.79
SCARB1-203ENST00000415380 UNC13DQ70J99 1090 aa19.99■□□□□ 0.79
SCARB1-203ENST00000415380 RRAGAQ7L523 313 aa19.99■□□□□ 0.79
SCARB1-203ENST00000415380 NBPF5PQ86XG9 351 aaPredicted RBP19.99■□□□□ 0.79
SCARB1-203ENST00000415380 RRP36Q96EU6 259 aaKnown RBP19.99■□□□□ 0.79
SCARB1-203ENST00000415380 VAT1LQ9HCJ6 419 aa19.99■□□□□ 0.79
SCARB1-203ENST00000415380 MRPS25P82663 173 aaKnown RBP19.98■□□□□ 0.79
SCARB1-203ENST00000415380 DYMQ7RTS9 669 aa19.98■□□□□ 0.79
SCARB1-203ENST00000415380 FAM76AQ8TAV0 307 aa19.98■□□□□ 0.79
SCARB1-203ENST00000415380 WDR66Q8TBY9 1149 aa19.98■□□□□ 0.79
SCARB1-203ENST00000415380 PNMA5Q96PV4 448 aa19.98■□□□□ 0.79
SCARB1-203ENST00000415380 PSMB7Q99436 277 aa19.98■□□□□ 0.79
SCARB1-203ENST00000415380 TMEM260Q9NX78 707 aa19.98■□□□□ 0.79
SCARB1-203ENST00000415380 SMARCAL1Q9NZC9 954 aa19.98■□□□□ 0.79
SCARB1-203ENST00000415380 HYOU1Q9Y4L1 999 aa19.98■□□□□ 0.79
SCARB1-203ENST00000415380 CXCR5P32302 372 aa19.98■□□□□ 0.79
SCARB1-203ENST00000415380 MATR3P43243 847 aaKnown RBP eCLIP19.98■□□□□ 0.798e-7■■□□□ 13.5
SCARB1-203ENST00000415380 SLC51AQ86UW1 340 aa19.98■□□□□ 0.79
SCARB1-203ENST00000415380 ALS2CR12Q96Q35 445 aa19.98■□□□□ 0.79
SCARB1-203ENST00000415380 EHD2Q9NZN4 543 aa19.98■□□□□ 0.79
SCARB1-203ENST00000415380 NAV1Q8NEY1 1877 aa19.97■□□□□ 0.79
SCARB1-203ENST00000415380 PVALEFA0A1B0GWK0 134 aa19.97■□□□□ 0.79
SCARB1-203ENST00000415380 GOLGA6CA6NDK9 693 aa19.97■□□□□ 0.79
SCARB1-203ENST00000415380 SHOX2O60902 331 aaPredicted RBP19.97■□□□□ 0.79
SCARB1-203ENST00000415380 GOLGA6DP0CG33 693 aa19.97■□□□□ 0.79
SCARB1-203ENST00000415380 TCP1P17987 556 aaKnown RBP19.97■□□□□ 0.79
SCARB1-203ENST00000415380 PPP4CP60510 307 aa19.97■□□□□ 0.79
SCARB1-203ENST00000415380 SLC7A5Q01650 507 aa19.97■□□□□ 0.79
SCARB1-203ENST00000415380 CCDC84Q86UT8 332 aaPredicted RBP19.97■□□□□ 0.79
SCARB1-203ENST00000415380 BAP1Q92560 729 aa19.97■□□□□ 0.79
SCARB1-203ENST00000415380 RUBCNQ92622 972 aa19.97■□□□□ 0.79
SCARB1-203ENST00000415380 MTMR9Q96QG7 549 aa19.97■□□□□ 0.79
SCARB1-203ENST00000415380 PIGSQ96S52 555 aa19.97■□□□□ 0.79
SCARB1-203ENST00000415380 SETDB2Q96T68 719 aa19.97■□□□□ 0.79
SCARB1-203ENST00000415380 GOLGA6AQ9NYA3 693 aa19.97■□□□□ 0.79
SCARB1-203ENST00000415380 SEC63Q9UGP8 760 aaKnown RBP19.97■□□□□ 0.79
SCARB1-203ENST00000415380 SRP68Q9UHB9 627 aaKnown RBP19.97■□□□□ 0.79
SCARB1-203ENST00000415380 SALL4Q9UJQ4 1053 aa19.97■□□□□ 0.79
SCARB1-203ENST00000415380 SNED1Q8TER0 1413 aa19.97■□□□□ 0.79
SCARB1-203ENST00000415380 GSTO1P78417 241 aa19.97■□□□□ 0.79
SCARB1-203ENST00000415380 ATP2B2Q01814 1243 aa19.97■□□□□ 0.79
SCARB1-203ENST00000415380 REXO1Q8N1G1 1221 aaKnown RBP19.97■□□□□ 0.79
SCARB1-203ENST00000415380 GUF1Q8N442 669 aaKnown RBP19.97■□□□□ 0.79
SCARB1-203ENST00000415380 LARP4BQ92615 738 aaKnown RBP19.97■□□□□ 0.79
SCARB1-203ENST00000415380 EYA3Q99504 573 aa19.97■□□□□ 0.79
SCARB1-203ENST00000415380 STK17AQ9UEE5 414 aa19.97■□□□□ 0.79
SCARB1-203ENST00000415380 ABCB11O95342 1321 aa19.97■□□□□ 0.79
SCARB1-203ENST00000415380 NCK2O43639 380 aa19.96■□□□□ 0.79
SCARB1-203ENST00000415380 TM4SF1P30408 202 aa19.96■□□□□ 0.79
SCARB1-203ENST00000415380 MAGEA1P43355 309 aa19.96■□□□□ 0.79
SCARB1-203ENST00000415380 MAPK8IP2Q13387 824 aaPredicted RBP19.96■□□□□ 0.79
SCARB1-203ENST00000415380 ANKRD65E5RJM6 399 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms