RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 CSPP1Q1MSJ5 1256 aa11.01□□□□□ -0.65
RIF1-202ENST00000414861 AXDND1Q5T1B0 1012 aaPredicted RBP11.01□□□□□ -0.65
RIF1-202ENST00000414861 POTEDQ86YR6 584 aa11.01□□□□□ -0.65
RIF1-202ENST00000414861 TEX2Q8IWB9 1127 aa11.01□□□□□ -0.65
RIF1-202ENST00000414861 CHST13Q8NET6 341 aa11.01□□□□□ -0.65
RIF1-202ENST00000414861 CLIC6Q96NY7 704 aa11.01□□□□□ -0.65
RIF1-202ENST00000414861 TAAR1Q96RJ0 339 aa11.01□□□□□ -0.65
RIF1-202ENST00000414861 FBXO2Q9UK22 296 aaPredicted RBP11.01□□□□□ -0.65
RIF1-202ENST00000414861 RPTORQ8N122 1335 aa11.01□□□□□ -0.65
RIF1-202ENST00000414861 UBE2HP62256 183 aa11.01□□□□□ -0.65
RIF1-202ENST00000414861 GTF3C2Q8WUA4 911 aaPredicted RBP11.01□□□□□ -0.65
RIF1-202ENST00000414861 ZFP91Q96JP5 570 aaPredicted RBP11.01□□□□□ -0.65
RIF1-202ENST00000414861 CAPNS2Q96L46 248 aa11.01□□□□□ -0.65
RIF1-202ENST00000414861 EFCC1Q9HA90 598 aa11.01□□□□□ -0.65
RIF1-202ENST00000414861 DDX49Q9Y6V7 483 aaKnown RBP11.01□□□□□ -0.65
RIF1-202ENST00000414861 KIAA1217Q5T5P2 1943 aa11.01□□□□□ -0.65
RIF1-202ENST00000414861 ASTN1O14525 1302 aa11.01□□□□□ -0.65
RIF1-202ENST00000414861 FRMPD4Q14CM0 1322 aa11.01□□□□□ -0.65
RIF1-202ENST00000414861 FAM86B1E9PN63 330 aa11□□□□□ -0.65
RIF1-202ENST00000414861 NEMFO60524 1076 aa11□□□□□ -0.65
RIF1-202ENST00000414861 PPP6R2O75170 966 aa11□□□□□ -0.65
RIF1-202ENST00000414861 FAM86B2P0C5J1 330 aa11□□□□□ -0.65
RIF1-202ENST00000414861 GCLCP48506 637 aaPredicted RBP11□□□□□ -0.65
RIF1-202ENST00000414861 SREBF2Q12772 1141 aa11□□□□□ -0.65
RIF1-202ENST00000414861 TAF1CQ15572 869 aaPredicted RBP11□□□□□ -0.65
RIF1-202ENST00000414861 IL17AQ16552 155 aa11□□□□□ -0.65
RIF1-202ENST00000414861 DEFB115Q30KQ5 88 aa11□□□□□ -0.65
RIF1-202ENST00000414861 MCTP2Q6DN12 878 aa11□□□□□ -0.65
RIF1-202ENST00000414861 GPRC5AQ8NFJ5 357 aa11□□□□□ -0.65
RIF1-202ENST00000414861 CYP2W1Q8TAV3 490 aa11□□□□□ -0.65
RIF1-202ENST00000414861 MORF4L1Q9UBU8 362 aa11□□□□□ -0.65
RIF1-202ENST00000414861 CPA4Q9UI42 421 aa11□□□□□ -0.65
RIF1-202ENST00000414861 CEP131Q9UPN4 1083 aa11□□□□□ -0.65
RIF1-202ENST00000414861 LRRC37A2A6NM11 1700 aa11□□□□□ -0.65
RIF1-202ENST00000414861 PLXNA1Q9UIW2 1896 aa11□□□□□ -0.65
RIF1-202ENST00000414861 EIF2AK2P19525 551 aaKnown RBP11□□□□□ -0.65
RIF1-202ENST00000414861 SAMD3Q8N6K7 520 aa11□□□□□ -0.65
RIF1-202ENST00000414861 GJA10Q969M2 543 aa11□□□□□ -0.65
RIF1-202ENST00000414861 LENG9Q96B70 501 aa11□□□□□ -0.65
RIF1-202ENST00000414861 UIMC1Q96RL1 719 aa11□□□□□ -0.65
RIF1-202ENST00000414861 ZCCHC17Q9NP64 241 aaKnown RBP11□□□□□ -0.65
RIF1-202ENST00000414861 MAP3K20Q9NYL2 800 aaKnown RBP11□□□□□ -0.65
RIF1-202ENST00000414861 SLC25A27O95847 323 aa10.99□□□□□ -0.65
RIF1-202ENST00000414861 BMP15O95972 392 aa10.99□□□□□ -0.65
RIF1-202ENST00000414861 PTPREP23469 700 aa10.99□□□□□ -0.65
RIF1-202ENST00000414861 TM4SF4P48230 202 aa10.99□□□□□ -0.65
RIF1-202ENST00000414861 USP11P51784 963 aa10.99□□□□□ -0.65
RIF1-202ENST00000414861 CNTN2Q02246 1040 aa10.99□□□□□ -0.65
RIF1-202ENST00000414861 NOGQ13253 232 aa10.99□□□□□ -0.65
RIF1-202ENST00000414861 FAM110CQ1W6H9 321 aa10.99□□□□□ -0.65
RIF1-202ENST00000414861 SPECC1Q5M775 1068 aa10.99□□□□□ -0.65
RIF1-202ENST00000414861 WDR78Q5VTH9 848 aa10.99□□□□□ -0.65
RIF1-202ENST00000414861 PPP4R3AQ6IN85 833 aa10.99□□□□□ -0.65
RIF1-202ENST00000414861 ANKRD35Q8N283 1001 aa10.99□□□□□ -0.65
RIF1-202ENST00000414861 KRI1Q8N9T8 703 aaKnown RBP10.99□□□□□ -0.65
RIF1-202ENST00000414861 MBOAT7Q96N66 472 aa10.99□□□□□ -0.65
RIF1-202ENST00000414861 RMDN3Q96TC7 470 aa10.99□□□□□ -0.65
RIF1-202ENST00000414861 GOLPH3LQ9H4A5 285 aa10.99□□□□□ -0.65
RIF1-202ENST00000414861 PXMP2Q9NR77 195 aa10.99□□□□□ -0.65
RIF1-202ENST00000414861 FBXO40Q9UH90 709 aa10.99□□□□□ -0.65
RIF1-202ENST00000414861 DDX25Q9UHL0 483 aaKnown RBP10.99□□□□□ -0.65
RIF1-202ENST00000414861 MORC2Q9Y6X9 1032 aaPredicted RBP10.99□□□□□ -0.65
RIF1-202ENST00000414861 ZSWIM8A7E2V4 1837 aa10.99□□□□□ -0.65
RIF1-202ENST00000414861 CYP3A7-CYP3A51PA0A087WV96 503 aa10.99□□□□□ -0.65
RIF1-202ENST00000414861 CYP3A4P08684 503 aa10.99□□□□□ -0.65
RIF1-202ENST00000414861 BCRP11274 1271 aa10.99□□□□□ -0.65
RIF1-202ENST00000414861 LIG1P18858 919 aa10.99□□□□□ -0.65
RIF1-202ENST00000414861 CYP3A7P24462 503 aa10.99□□□□□ -0.65
RIF1-202ENST00000414861 CIITAP33076 1130 aa10.99□□□□□ -0.65
RIF1-202ENST00000414861 INHBEP58166 350 aa10.99□□□□□ -0.65
RIF1-202ENST00000414861 SHC4Q6S5L8 630 aa10.99□□□□□ -0.65
RIF1-202ENST00000414861 JMYQ8N9B5 988 aa10.99□□□□□ -0.65
RIF1-202ENST00000414861 PFASO15067 1338 aa10.99□□□□□ -0.65
RIF1-202ENST00000414861 CEP350Q5VT06 3117 aa10.99□□□□□ -0.65
RIF1-202ENST00000414861 IGLV3-22A0A075B6J6 115 aa10.98□□□□□ -0.65
RIF1-202ENST00000414861 VWA3AA6NCI4 1184 aa10.98□□□□□ -0.65
RIF1-202ENST00000414861 TRAK2O60296 914 aa10.98□□□□□ -0.65
RIF1-202ENST00000414861 PGK2P07205 417 aa10.98□□□□□ -0.65
RIF1-202ENST00000414861 OR52Z1P0C646 297 aa10.98□□□□□ -0.65
RIF1-202ENST00000414861 GCFC2P16383 781 aaKnown RBP10.98□□□□□ -0.65
RIF1-202ENST00000414861 CRHR2Q13324 411 aa10.98□□□□□ -0.65
RIF1-202ENST00000414861 PGM5Q15124 567 aa10.98□□□□□ -0.65
RIF1-202ENST00000414861 PRR16Q569H4 304 aa10.98□□□□□ -0.65
RIF1-202ENST00000414861 ADALQ6DHV7 355 aa10.98□□□□□ -0.65
RIF1-202ENST00000414861 MOXD1Q6UVY6 613 aa10.98□□□□□ -0.65
RIF1-202ENST00000414861 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.98□□□□□ -0.65
RIF1-202ENST00000414861 SHCBP1Q8NEM2 672 aa10.98□□□□□ -0.65
RIF1-202ENST00000414861 HAS1Q92839 578 aa10.98□□□□□ -0.65
RIF1-202ENST00000414861 MTMR9Q96QG7 549 aa10.98□□□□□ -0.65
RIF1-202ENST00000414861 PDCD2LQ9BRP1 358 aa10.98□□□□□ -0.65
RIF1-202ENST00000414861 CSRNP2Q9H175 543 aa10.98□□□□□ -0.65
RIF1-202ENST00000414861 EHMT1Q9H9B1 1298 aa10.98□□□□□ -0.65
RIF1-202ENST00000414861 SRPRBQ9Y5M8 271 aaKnown RBP10.98□□□□□ -0.65
RIF1-202ENST00000414861 GOLGA6L4A6NEF3 574 aa10.98□□□□□ -0.65
RIF1-202ENST00000414861 COPB2P35606 906 aa10.98□□□□□ -0.65
RIF1-202ENST00000414861 MRPS9P82933 396 aaKnown RBP10.98□□□□□ -0.65
RIF1-202ENST00000414861 ORC2Q13416 577 aaPredicted RBP10.98□□□□□ -0.65
RIF1-202ENST00000414861 CALCRLQ16602 461 aa10.98□□□□□ -0.65
RIF1-202ENST00000414861 USP49Q70CQ1 688 aa10.98□□□□□ -0.65
RIF1-202ENST00000414861 FGD4Q96M96 766 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms