RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.97□□□□□ -0.49
HLA-DMB-257ENST00000414017 ARMCX2Q7L311 632 aa11.97□□□□□ -0.49
HLA-DMB-257ENST00000414017 TRMT44Q8IYL2 757 aaKnown RBP11.97□□□□□ -0.49
HLA-DMB-257ENST00000414017 SNX21Q969T3 373 aa11.97□□□□□ -0.49
HLA-DMB-257ENST00000414017 SHISA4Q96DD7 197 aa11.97□□□□□ -0.49
HLA-DMB-257ENST00000414017 ZFP91Q96JP5 570 aaPredicted RBP11.97□□□□□ -0.49
HLA-DMB-257ENST00000414017 FGD4Q96M96 766 aa11.97□□□□□ -0.49
HLA-DMB-257ENST00000414017 MPHOSPH6Q99547 160 aaKnown RBP11.97□□□□□ -0.49
HLA-DMB-257ENST00000414017 TINF2Q9BSI4 451 aa11.97□□□□□ -0.49
HLA-DMB-257ENST00000414017 ZHX1Q9UKY1 873 aaPredicted RBP11.97□□□□□ -0.49
HLA-DMB-257ENST00000414017 RBBP6Q7Z6E9 1792 aaKnown RBP11.97□□□□□ -0.49
HLA-DMB-257ENST00000414017 ZNF236Q9UL36 1845 aa11.96□□□□□ -0.49
HLA-DMB-257ENST00000414017 ASB14A6NK59 587 aa11.96□□□□□ -0.49
HLA-DMB-257ENST00000414017 MEIS2O14770 477 aa11.96□□□□□ -0.49
HLA-DMB-257ENST00000414017 ADAMTS3O15072 1205 aa11.96□□□□□ -0.49
HLA-DMB-257ENST00000414017 MYCNP04198 464 aaPredicted RBP11.96□□□□□ -0.49
HLA-DMB-257ENST00000414017 OLFML2BQ68BL8 750 aa11.96□□□□□ -0.49
HLA-DMB-257ENST00000414017 TNS4Q8IZW8 715 aa11.96□□□□□ -0.49
HLA-DMB-257ENST00000414017 REXO1Q8N1G1 1221 aaKnown RBP11.96□□□□□ -0.49
HLA-DMB-257ENST00000414017 BICD2Q8TD16 824 aa11.96□□□□□ -0.49
HLA-DMB-257ENST00000414017 PXYLP1Q8TE99 480 aa11.96□□□□□ -0.49
HLA-DMB-257ENST00000414017 NSUN6Q8TEA1 469 aaKnown RBP11.96□□□□□ -0.49
HLA-DMB-257ENST00000414017 C8orf76Q96K31 380 aa11.96□□□□□ -0.49
HLA-DMB-257ENST00000414017 ZMYND12Q9H0C1 365 aa11.96□□□□□ -0.49
HLA-DMB-257ENST00000414017 GLT8D2Q9H1C3 349 aa11.96□□□□□ -0.49
HLA-DMB-257ENST00000414017 SH3GLB2Q9NR46 395 aa11.96□□□□□ -0.49
HLA-DMB-257ENST00000414017 PXMP2Q9NR77 195 aa11.96□□□□□ -0.49
HLA-DMB-257ENST00000414017 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.96□□□□□ -0.49
HLA-DMB-257ENST00000414017 PCDHA6Q9UN73 950 aa11.96□□□□□ -0.49
HLA-DMB-257ENST00000414017 CNPY2Q9Y2B0 182 aa11.96□□□□□ -0.49
HLA-DMB-257ENST00000414017 DIS3Q9Y2L1 958 aaKnown RBP11.96□□□□□ -0.49
HLA-DMB-257ENST00000414017 KIF3AQ9Y496 699 aa11.96□□□□□ -0.49
HLA-DMB-257ENST00000414017 PCDHA8Q9Y5H6 950 aa11.96□□□□□ -0.49
HLA-DMB-257ENST00000414017 PLXNA1Q9UIW2 1896 aa11.95□□□□□ -0.5
HLA-DMB-257ENST00000414017 ASTN1O14525 1302 aa11.95□□□□□ -0.5
HLA-DMB-257ENST00000414017 B4DLN1 442 aa11.95□□□□□ -0.5
HLA-DMB-257ENST00000414017 CACNB2Q08289 660 aaPredicted RBP11.95□□□□□ -0.5
HLA-DMB-257ENST00000414017 GNL2Q13823 731 aaKnown RBP11.95□□□□□ -0.5
HLA-DMB-257ENST00000414017 MTFR1Q15390 333 aa11.95□□□□□ -0.5
HLA-DMB-257ENST00000414017 ANO1Q5XXA6 986 aa11.95□□□□□ -0.5
HLA-DMB-257ENST00000414017 KRT40Q6A162 431 aa11.95□□□□□ -0.5
HLA-DMB-257ENST00000414017 FBXO16Q8IX29 292 aaPredicted RBP11.95□□□□□ -0.5
HLA-DMB-257ENST00000414017 BLIDQ8IZY5 108 aa11.95□□□□□ -0.5
HLA-DMB-257ENST00000414017 SAMD3Q8N6K7 520 aa11.95□□□□□ -0.5
HLA-DMB-257ENST00000414017 DNERQ8NFT8 737 aa11.95□□□□□ -0.5
HLA-DMB-257ENST00000414017 ANO3Q9BYT9 981 aa11.95□□□□□ -0.5
HLA-DMB-257ENST00000414017 EHMT1Q9H9B1 1298 aa11.95□□□□□ -0.5
HLA-DMB-257ENST00000414017 BRMS1Q9HCU9 246 aa11.95□□□□□ -0.5
HLA-DMB-257ENST00000414017 MAP3K20Q9NYL2 800 aaKnown RBP11.95□□□□□ -0.5
HLA-DMB-257ENST00000414017 PCDHA4Q9UN74 947 aa11.95□□□□□ -0.5
HLA-DMB-257ENST00000414017 ESYT2A0FGR8 921 aa11.94□□□□□ -0.5
HLA-DMB-257ENST00000414017 H3BQV1 296 aa11.94□□□□□ -0.5
HLA-DMB-257ENST00000414017 PIK3CDO00329 1044 aa11.94□□□□□ -0.5
HLA-DMB-257ENST00000414017 SNAI1O95863 264 aaPredicted RBP11.94□□□□□ -0.5
HLA-DMB-257ENST00000414017 NR3C2P08235 984 aa11.94□□□□□ -0.5
HLA-DMB-257ENST00000414017 CCND2P30279 289 aa11.94□□□□□ -0.5
HLA-DMB-257ENST00000414017 CCND3P30281 292 aaPredicted RBP11.94□□□□□ -0.5
HLA-DMB-257ENST00000414017 KRT2P35908 639 aa11.94□□□□□ -0.5
HLA-DMB-257ENST00000414017 CUL4AQ13619 759 aa11.94□□□□□ -0.5
HLA-DMB-257ENST00000414017 BECN1Q14457 450 aa11.94□□□□□ -0.5
HLA-DMB-257ENST00000414017 PGM5Q15124 567 aa11.94□□□□□ -0.5
HLA-DMB-257ENST00000414017 SAFBQ15424 915 aaKnown RBP eCLIP11.94□□□□□ -0.5
HLA-DMB-257ENST00000414017 STXBP2Q15833 593 aa11.94□□□□□ -0.5
HLA-DMB-257ENST00000414017 IFFO2Q5TF58 517 aa11.94□□□□□ -0.5
HLA-DMB-257ENST00000414017 SEPT14Q6ZU15 432 aa11.94□□□□□ -0.5
HLA-DMB-257ENST00000414017 ZNF467Q7Z7K2 595 aaPredicted RBP11.94□□□□□ -0.5
HLA-DMB-257ENST00000414017 IL31RAQ8NI17 732 aa11.94□□□□□ -0.5
HLA-DMB-257ENST00000414017 PDCD2LQ9BRP1 358 aa11.94□□□□□ -0.5
HLA-DMB-257ENST00000414017 PHF20Q9BVI0 1012 aa11.94□□□□□ -0.5
HLA-DMB-257ENST00000414017 UNC93B1Q9H1C4 597 aa11.94□□□□□ -0.5
HLA-DMB-257ENST00000414017 HMX1Q9NP08 348 aaPredicted RBP11.94□□□□□ -0.5
HLA-DMB-257ENST00000414017 RTEL1Q9NZ71 1219 aa11.94□□□□□ -0.5
HLA-DMB-257ENST00000414017 LCTP09848 1927 aa11.94□□□□□ -0.5
HLA-DMB-257ENST00000414017 SYNGAP1Q96PV0 1343 aa11.93□□□□□ -0.5
HLA-DMB-257ENST00000414017 FOSP01100 380 aaPredicted RBP11.93□□□□□ -0.5
HLA-DMB-257ENST00000414017 CCL5P13501 91 aa11.93□□□□□ -0.5
HLA-DMB-257ENST00000414017 ZNF76P36508 570 aa11.93□□□□□ -0.5
HLA-DMB-257ENST00000414017 GHRHRQ02643 423 aa11.93□□□□□ -0.5
HLA-DMB-257ENST00000414017 AP3B2Q13367 1082 aa11.93□□□□□ -0.5
HLA-DMB-257ENST00000414017 ACVR2BQ13705 512 aa11.93□□□□□ -0.5
HLA-DMB-257ENST00000414017 LARP1BQ659C4 914 aaKnown RBP11.93□□□□□ -0.5
HLA-DMB-257ENST00000414017 MCTP1Q6DN14 999 aa11.93□□□□□ -0.5
HLA-DMB-257ENST00000414017 MAMDC4Q6UXC1 1216 aa11.93□□□□□ -0.5
HLA-DMB-257ENST00000414017 TRPV1Q8NER1 839 aa11.93□□□□□ -0.5
HLA-DMB-257ENST00000414017 OXER1Q8TDS5 423 aa11.93□□□□□ -0.5
HLA-DMB-257ENST00000414017 MAF1Q9H063 256 aa11.93□□□□□ -0.5
HLA-DMB-257ENST00000414017 RNF208Q9H0X6 261 aa11.93□□□□□ -0.5
HLA-DMB-257ENST00000414017 PDGFCQ9NRA1 345 aa11.93□□□□□ -0.5
HLA-DMB-257ENST00000414017 HTTP42858 3142 aa11.93□□□□□ -0.5
HLA-DMB-257ENST00000414017 CENPFP49454 3210 aa11.92□□□□□ -0.5
HLA-DMB-257ENST00000414017 CCDC194A0A1B0GVG4 234 aa11.92□□□□□ -0.5
HLA-DMB-257ENST00000414017 VPS37CA5D8V6 355 aaPredicted RBP11.92□□□□□ -0.5
HLA-DMB-257ENST00000414017 SORBS3O60504 671 aa11.92□□□□□ -0.5
HLA-DMB-257ENST00000414017 MMP1P03956 469 aa11.92□□□□□ -0.5
HLA-DMB-257ENST00000414017 ANP32AP39687 249 aaKnown RBP11.92□□□□□ -0.5
HLA-DMB-257ENST00000414017 ADCYAP1R1P41586 468 aa11.92□□□□□ -0.5
HLA-DMB-257ENST00000414017 CLK2P49760 499 aaKnown RBP11.92□□□□□ -0.5
HLA-DMB-257ENST00000414017 NR5A1Q13285 461 aa11.92□□□□□ -0.5
HLA-DMB-257ENST00000414017 GALNT17Q6IS24 598 aa11.92□□□□□ -0.5
HLA-DMB-257ENST00000414017 PIK3AP1Q6ZUJ8 805 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms