RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 TUBBP07437 444 aa16.19■□□□□ 0.18
SEMA3F-202ENST00000413852 IL6STP40189 918 aaPredicted RBP16.19■□□□□ 0.18
SEMA3F-202ENST00000413852 IRX3P78415 501 aaPredicted RBP16.19■□□□□ 0.18
SEMA3F-202ENST00000413852 PPFIA1Q13136 1202 aa16.19■□□□□ 0.18
SEMA3F-202ENST00000413852 POTEDQ86YR6 584 aa16.19■□□□□ 0.18
SEMA3F-202ENST00000413852 PACSIN1Q9BY11 444 aa16.19■□□□□ 0.18
SEMA3F-202ENST00000413852 MAD2L2Q9UI95 211 aa16.19■□□□□ 0.18
SEMA3F-202ENST00000413852 NNTQ13423 1086 aa16.19■□□□□ 0.18
SEMA3F-202ENST00000413852 PPP2R5BQ15173 497 aa16.19■□□□□ 0.18
SEMA3F-202ENST00000413852 DIXDC1Q155Q3 683 aa16.19■□□□□ 0.18
SEMA3F-202ENST00000413852 ARL6IP4Q66PJ3 421 aaKnown RBP16.19■□□□□ 0.18
SEMA3F-202ENST00000413852 CHADLQ6NUI6 762 aa16.19■□□□□ 0.18
SEMA3F-202ENST00000413852 MMTAG2Q9BU76 263 aaKnown RBP16.19■□□□□ 0.18
SEMA3F-202ENST00000413852 FGFBP2Q9BYJ0 223 aa16.19■□□□□ 0.18
SEMA3F-202ENST00000413852 UBA5Q9GZZ9 404 aa16.19■□□□□ 0.18
SEMA3F-202ENST00000413852 MINPP1Q9UNW1 487 aa16.19■□□□□ 0.18
SEMA3F-202ENST00000413852 SHANK3Q9BYB0 1731 aa16.18■□□□□ 0.18
SEMA3F-202ENST00000413852 A0A087WUV0 522 aaPredicted RBP16.18■□□□□ 0.18
SEMA3F-202ENST00000413852 ERVV-1B6SEH8 477 aa16.18■□□□□ 0.18
SEMA3F-202ENST00000413852 NDUFAB1O14561 156 aa16.18■□□□□ 0.18
SEMA3F-202ENST00000413852 CAMTA2O94983 1202 aa16.18■□□□□ 0.18
SEMA3F-202ENST00000413852 TRAPPC10P48553 1259 aa16.18■□□□□ 0.18
SEMA3F-202ENST00000413852 ITPK1Q13572 414 aa16.18■□□□□ 0.18
SEMA3F-202ENST00000413852 C8orf74Q6P047 294 aa16.18■□□□□ 0.18
SEMA3F-202ENST00000413852 USP17L2Q6R6M4 530 aa16.18■□□□□ 0.18
SEMA3F-202ENST00000413852 KLHL7Q8IXQ5 586 aa16.18■□□□□ 0.18
SEMA3F-202ENST00000413852 DHX37Q8IY37 1157 aaKnown RBP16.18■□□□□ 0.18
SEMA3F-202ENST00000413852 KRT12Q99456 494 aa16.18■□□□□ 0.18
SEMA3F-202ENST00000413852 NDST4Q9H3R1 872 aa16.18■□□□□ 0.18
SEMA3F-202ENST00000413852 STIM2Q9P246 746 aa16.18■□□□□ 0.18
SEMA3F-202ENST00000413852 CAPN7Q9Y6W3 813 aa16.18■□□□□ 0.18
SEMA3F-202ENST00000413852 DOCK2Q92608 1830 aa16.18■□□□□ 0.18
SEMA3F-202ENST00000413852 DISP2A7MBM2 1401 aa16.18■□□□□ 0.18
SEMA3F-202ENST00000413852 MYMKA6NI61 221 aa16.18■□□□□ 0.18
SEMA3F-202ENST00000413852 ZNF233A6NK53 670 aa16.18■□□□□ 0.18
SEMA3F-202ENST00000413852 M0R2N6 131 aa16.18■□□□□ 0.18
SEMA3F-202ENST00000413852 HPDP32754 393 aaPredicted RBP16.18■□□□□ 0.18
SEMA3F-202ENST00000413852 KCNB1Q14721 858 aa16.18■□□□□ 0.18
SEMA3F-202ENST00000413852 CAVIN4Q5BKX8 364 aa16.18■□□□□ 0.18
SEMA3F-202ENST00000413852 EHBP1Q8NDI1 1231 aa16.18■□□□□ 0.18
SEMA3F-202ENST00000413852 RUFY1Q96T51 708 aa16.18■□□□□ 0.18
SEMA3F-202ENST00000413852 MTA3Q9BTC8 594 aa16.18■□□□□ 0.18
SEMA3F-202ENST00000413852 SIK3Q9Y2K2 1263 aa16.18■□□□□ 0.18
SEMA3F-202ENST00000413852 POTEMA6NI47 508 aa16.17■□□□□ 0.18
SEMA3F-202ENST00000413852 STXBP3O00186 592 aa16.17■□□□□ 0.18
SEMA3F-202ENST00000413852 MCM3P25205 808 aa16.17■□□□□ 0.18
SEMA3F-202ENST00000413852 HNRNPH1P31943 449 aaKnown RBP16.17■□□□□ 0.18
SEMA3F-202ENST00000413852 KLHDC7AQ5VTJ3 777 aa16.17■□□□□ 0.18
SEMA3F-202ENST00000413852 KCNK18Q7Z418 384 aa16.17■□□□□ 0.18
SEMA3F-202ENST00000413852 DDX42Q86XP3 938 aaKnown RBP eCLIP16.17■□□□□ 0.18
SEMA3F-202ENST00000413852 CCDC170Q8IYT3 715 aa16.17■□□□□ 0.18
SEMA3F-202ENST00000413852 MMGT1Q8N4V1 131 aa16.17■□□□□ 0.18
SEMA3F-202ENST00000413852 USO1O60763 962 aaKnown RBP16.17■□□□□ 0.18
SEMA3F-202ENST00000413852 VWA3BQ502W6 1294 aa16.17■□□□□ 0.18
SEMA3F-202ENST00000413852 TRIM58Q8NG06 486 aa16.17■□□□□ 0.18
SEMA3F-202ENST00000413852 DHTKD1Q96HY7 919 aaPredicted RBP16.17■□□□□ 0.18
SEMA3F-202ENST00000413852 ANO9A1A5B4 782 aa16.16■□□□□ 0.18
SEMA3F-202ENST00000413852 HSF2BPO75031 334 aa16.16■□□□□ 0.18
SEMA3F-202ENST00000413852 PALMO75781 387 aa16.16■□□□□ 0.18
SEMA3F-202ENST00000413852 HEXIM1O94992 359 aaKnown RBP16.16■□□□□ 0.18
SEMA3F-202ENST00000413852 NAPAP54920 295 aa16.16■□□□□ 0.18
SEMA3F-202ENST00000413852 EHHADHQ08426 723 aa16.16■□□□□ 0.18
SEMA3F-202ENST00000413852 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.16■□□□□ 0.18
SEMA3F-202ENST00000413852 MKNK2Q9HBH9 465 aa16.16■□□□□ 0.18
SEMA3F-202ENST00000413852 LRRC4CQ9HCJ2 640 aa16.16■□□□□ 0.18
SEMA3F-202ENST00000413852 TCP11L1Q9NUJ3 509 aa16.16■□□□□ 0.18
SEMA3F-202ENST00000413852 PLAGL2Q9UPG8 496 aa16.16■□□□□ 0.18
SEMA3F-202ENST00000413852 ZNF804BA4D1E1 1349 aa16.16■□□□□ 0.18
SEMA3F-202ENST00000413852 CALML3P27482 149 aa16.16■□□□□ 0.18
SEMA3F-202ENST00000413852 INPP5BP32019 993 aa16.16■□□□□ 0.18
SEMA3F-202ENST00000413852 MNAT1P51948 309 aa16.16■□□□□ 0.18
SEMA3F-202ENST00000413852 NELFCDQ8IXH7 590 aa16.16■□□□□ 0.18
SEMA3F-202ENST00000413852 AMOTL1Q8IY63 956 aa16.16■□□□□ 0.18
SEMA3F-202ENST00000413852 SH3RF3Q8TEJ3 882 aaPredicted RBP16.16■□□□□ 0.18
SEMA3F-202ENST00000413852 HYOU1Q9Y4L1 999 aa16.16■□□□□ 0.18
SEMA3F-202ENST00000413852 SSBP05455 408 aaKnown RBP eCLIP16.15■□□□□ 0.18
SEMA3F-202ENST00000413852 FGRP09769 529 aa16.15■□□□□ 0.18
SEMA3F-202ENST00000413852 GUCY2CP25092 1073 aa16.15■□□□□ 0.18
SEMA3F-202ENST00000413852 RNF187Q5TA31 235 aaPredicted RBP16.15■□□□□ 0.18
SEMA3F-202ENST00000413852 CCDC70Q6NSX1 233 aa16.15■□□□□ 0.18
SEMA3F-202ENST00000413852 CACNA2D4Q7Z3S7 1137 aa16.15■□□□□ 0.18
SEMA3F-202ENST00000413852 SH3GL2Q99962 352 aa16.15■□□□□ 0.18
SEMA3F-202ENST00000413852 CRNKL1Q9BZJ0 848 aaKnown RBP16.15■□□□□ 0.18
SEMA3F-202ENST00000413852 BCL9O00512 1426 aa16.15■□□□□ 0.18
SEMA3F-202ENST00000413852 SHTN1A0MZ66 631 aa16.15■□□□□ 0.18
SEMA3F-202ENST00000413852 OR52Z1P0C646 297 aa16.15■□□□□ 0.18
SEMA3F-202ENST00000413852 CASKIN2Q8WXE0 1202 aa16.15■□□□□ 0.18
SEMA3F-202ENST00000413852 PIK3R5Q8WYR1 880 aa16.15■□□□□ 0.18
SEMA3F-202ENST00000413852 CCDC87Q9NVE4 849 aa16.15■□□□□ 0.18
SEMA3F-202ENST00000413852 CACNA1SQ13698 1873 aa16.15■□□□□ 0.18
SEMA3F-202ENST00000413852 TLR2O60603 784 aa16.15■□□□□ 0.18
SEMA3F-202ENST00000413852 KIF5BP33176 963 aa16.15■□□□□ 0.18
SEMA3F-202ENST00000413852 KCNMA1Q12791 1236 aa16.15■□□□□ 0.18
SEMA3F-202ENST00000413852 CLEC10AQ8IUN9 316 aa16.15■□□□□ 0.18
SEMA3F-202ENST00000413852 MAPKAPK5Q8IW41 473 aa16.15■□□□□ 0.18
SEMA3F-202ENST00000413852 TBCKQ8TEA7 893 aa16.15■□□□□ 0.18
SEMA3F-202ENST00000413852 BAP1Q92560 729 aa16.15■□□□□ 0.18
SEMA3F-202ENST00000413852 RPGRIP1Q96KN7 1286 aa16.15■□□□□ 0.18
SEMA3F-202ENST00000413852 ERGIC2Q96RQ1 377 aa16.15■□□□□ 0.18
SEMA3F-202ENST00000413852 NUP58Q9BVL2 599 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms