RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 RNF8O76064 485 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 LMNAP02545 664 aaKnown RBP9.29□□□□□ -0.92
PBRM1-209ENST00000412587 CCZ1BP86790 482 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 CCZ1P86791 482 aaPredicted RBP9.29□□□□□ -0.92
PBRM1-209ENST00000412587 ROR2Q01974 943 aaKnown RBP9.29□□□□□ -0.92
PBRM1-209ENST00000412587 ARID5AQ03989 594 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 UBXN1Q04323 297 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 PDE4DQ08499 809 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 FAM133BQ5BKY9 247 aaKnown RBP9.29□□□□□ -0.92
PBRM1-209ENST00000412587 SPATA21Q7Z572 469 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 SLF1Q9BQI6 1058 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 USP31Q70CQ4 1352 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 CPSF1Q10570 1443 aaKnown RBP9.29□□□□□ -0.92
PBRM1-209ENST00000412587 H7C1W4 665 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 C21orf2O43822 256 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 ZRANB2O95218 330 aaKnown RBP eCLIP9.29□□□□□ -0.92
PBRM1-209ENST00000412587 CCND1P24385 295 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 ADD1P35611 737 aaKnown RBP9.29□□□□□ -0.92
PBRM1-209ENST00000412587 KIRREL3Q8IZU9 778 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 MLKLQ8NB16 471 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 TTLL11Q8NHH1 800 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 SNX29Q8TEQ0 813 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 KIFC2Q96AC6 838 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 MOV10L1Q9BXT6 1211 aaKnown RBP9.29□□□□□ -0.92
PBRM1-209ENST00000412587 RHBDL2Q9NX52 303 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 ARHGEF35A5YM69 484 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 GMNCA6NCL1 334 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 LRRIQ3A6PVS8 624 aaPredicted RBP9.29□□□□□ -0.92
PBRM1-209ENST00000412587 TXNDC9O14530 226 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 PCYT1AP49585 367 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 DDR1Q08345 913 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 Q4G0T1 1027 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 BRDTQ58F21 947 aaPredicted RBP9.29□□□□□ -0.92
PBRM1-209ENST00000412587 NCAPH2Q6IBW4 605 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 MAP4K1Q92918 833 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 TSC22D4Q9Y3Q8 395 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 ATP10DQ9P241 1426 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 LMTK2Q8IWU2 1503 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 DYTNA2CJ06 578 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 SMCO2A6NFE2 343 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 MMP10P09238 476 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 PCP11498 1178 aaKnown RBP9.29□□□□□ -0.92
PBRM1-209ENST00000412587 CNGA1P29973 690 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 IRX4P78413 519 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 CCDC13Q8IYE1 715 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 ARL10Q8N8L6 244 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 PARD3BQ8TEW8 1205 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 PLVAPQ9BX97 442 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 NFE2L3Q9Y4A8 694 aa9.29□□□□□ -0.92
PBRM1-209ENST00000412587 H3BQF6 201 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 IKBKBO14920 756 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 STAMBPO95630 424 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 GJA8P48165 433 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 GUCY2FP51841 1108 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 SF3A3Q12874 501 aaKnown RBP eCLIP9.28□□□□□ -0.92
PBRM1-209ENST00000412587 CUL4BQ13620 913 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 HLFQ16534 295 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 E4F1Q66K89 784 aaPredicted RBP9.28□□□□□ -0.92
PBRM1-209ENST00000412587 FTOQ9C0B1 505 aaKnown RBP eCLIP9.28□□□□□ -0.92
PBRM1-209ENST00000412587 AS3MTQ9HBK9 375 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 NOD2Q9HC29 1040 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 KLRF2D3W0D1 207 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 NOP56O00567 594 aaKnown RBP9.28□□□□□ -0.92
PBRM1-209ENST00000412587 HGSO14964 777 aaPredicted RBP9.28□□□□□ -0.92
PBRM1-209ENST00000412587 YY1P25490 414 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 CALCRLQ16602 461 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 ZNF473Q8WTR7 871 aaKnown RBP9.28□□□□□ -0.92
PBRM1-209ENST00000412587 STAMBPL1Q96FJ0 436 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 TXLNGQ9NUQ3 528 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 MAP3K7O43318 606 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 PFKFB2O60825 505 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 SASH1O94885 1247 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 CNNM4Q6P4Q7 775 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 LRRC47Q8N1G4 583 aaKnown RBP9.28□□□□□ -0.92
PBRM1-209ENST00000412587 SMCR8Q8TEV9 937 aaPredicted RBP9.28□□□□□ -0.92
PBRM1-209ENST00000412587 LSG1Q9H089 658 aaKnown RBP9.28□□□□□ -0.92
PBRM1-209ENST00000412587 UNC45AQ9H3U1 944 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 DBNDD1Q9H9R9 158 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 STK24Q9Y6E0 443 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 CCDC169A6NNP5 214 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 E2F6O75461 281 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 PPP1R37O75864 691 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 FSBPO95073 299 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 ZNF202O95125 648 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 TCP1P17987 556 aaKnown RBP9.28□□□□□ -0.92
PBRM1-209ENST00000412587 KRT9P35527 623 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 CCNHP51946 323 aaPredicted RBP9.28□□□□□ -0.92
PBRM1-209ENST00000412587 VSNL1P62760 191 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 PPARDQ03181 441 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 MYSM1Q5VVJ2 828 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 FYB2Q5VWT5 728 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 FOXR1Q6PIV2 292 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 PI16Q6UXB8 463 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 PPP1R21Q6ZMI0 780 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 SULF1Q8IWU6 871 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 CMTR1Q8N1G2 835 aaKnown RBP9.28□□□□□ -0.92
PBRM1-209ENST00000412587 UBAP1Q9NZ09 502 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 STOML1Q9UBI4 398 aa9.28□□□□□ -0.92
PBRM1-209ENST00000412587 GRAPQ13588 217 aa9.27□□□□□ -0.92
PBRM1-209ENST00000412587 DCAF17Q5H9S7 520 aaPredicted RBP9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms