RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 SNAI1O95863 264 aaPredicted RBP9.46□□□□□ -0.9
RPE-204ENST00000411934 CFBP00751 764 aa9.46□□□□□ -0.9
RPE-204ENST00000411934 ZNF865P0CJ78 1059 aaPredicted RBP9.46□□□□□ -0.9
RPE-204ENST00000411934 SCG2P13521 617 aa9.46□□□□□ -0.9
RPE-204ENST00000411934 CALML3P27482 149 aa9.46□□□□□ -0.9
RPE-204ENST00000411934 ADD1P35611 737 aaKnown RBP9.46□□□□□ -0.9
RPE-204ENST00000411934 NKX3-2P78367 333 aa9.46□□□□□ -0.9
RPE-204ENST00000411934 CNTN2Q02246 1040 aa9.46□□□□□ -0.9
RPE-204ENST00000411934 AP3B2Q13367 1082 aa9.46□□□□□ -0.9
RPE-204ENST00000411934 IFFO2Q5TF58 517 aa9.46□□□□□ -0.9
RPE-204ENST00000411934 WWC2Q6AWC2 1192 aa9.46□□□□□ -0.9
RPE-204ENST00000411934 GTF3C6Q969F1 213 aa9.46□□□□□ -0.9
RPE-204ENST00000411934 ZSCAN31Q96LW9 406 aaPredicted RBP9.46□□□□□ -0.9
RPE-204ENST00000411934 KATNBL1Q9H079 304 aa9.46□□□□□ -0.9
RPE-204ENST00000411934 EHMT1Q9H9B1 1298 aa9.46□□□□□ -0.9
RPE-204ENST00000411934 TPCN1Q9ULQ1 816 aa9.46□□□□□ -0.9
RPE-204ENST00000411934 Q9Y3F1 56 aa9.46□□□□□ -0.9
RPE-204ENST00000411934 ASTN1O14525 1302 aa9.46□□□□□ -0.9
RPE-204ENST00000411934 CENPFP49454 3210 aa9.45□□□□□ -0.9
RPE-204ENST00000411934 RBM47A0AV96 593 aaKnown RBP9.45□□□□□ -0.9
RPE-204ENST00000411934 STXBP3O00186 592 aa9.45□□□□□ -0.9
RPE-204ENST00000411934 FOSP01100 380 aaPredicted RBP9.45□□□□□ -0.9
RPE-204ENST00000411934 CST5P28325 142 aaPredicted RBP9.45□□□□□ -0.9
RPE-204ENST00000411934 GNA11P29992 359 aa9.45□□□□□ -0.9
RPE-204ENST00000411934 CCND3P30281 292 aaPredicted RBP9.45□□□□□ -0.9
RPE-204ENST00000411934 NAPAP54920 295 aa9.45□□□□□ -0.9
RPE-204ENST00000411934 PDE4DQ08499 809 aa9.45□□□□□ -0.9
RPE-204ENST00000411934 SSRP1Q08945 709 aaKnown RBP9.45□□□□□ -0.9
RPE-204ENST00000411934 SCRN1Q12765 414 aa9.45□□□□□ -0.9
RPE-204ENST00000411934 TRIM32Q13049 653 aa9.45□□□□□ -0.9
RPE-204ENST00000411934 ACVR2BQ13705 512 aa9.45□□□□□ -0.9
RPE-204ENST00000411934 GALNT17Q6IS24 598 aa9.45□□□□□ -0.9
RPE-204ENST00000411934 KCNV1Q6PIU1 500 aa9.45□□□□□ -0.9
RPE-204ENST00000411934 HEATR3Q7Z4Q2 680 aa9.45□□□□□ -0.9
RPE-204ENST00000411934 RAB11FIP4Q86YS3 637 aa9.45□□□□□ -0.9
RPE-204ENST00000411934 BICD2Q8TD16 824 aa9.45□□□□□ -0.9
RPE-204ENST00000411934 WASF1Q92558 559 aa9.45□□□□□ -0.9
RPE-204ENST00000411934 SHISA4Q96DD7 197 aa9.45□□□□□ -0.9
RPE-204ENST00000411934 DEFB118Q96PH6 123 aa9.45□□□□□ -0.9
RPE-204ENST00000411934 RMDN3Q96TC7 470 aa9.45□□□□□ -0.9
RPE-204ENST00000411934 LLPHQ9BRT6 129 aaKnown RBP9.45□□□□□ -0.9
RPE-204ENST00000411934 ZMYND12Q9H0C1 365 aa9.45□□□□□ -0.9
RPE-204ENST00000411934 PSTPIP2Q9H939 334 aa9.45□□□□□ -0.9
RPE-204ENST00000411934 RIC8AQ9NPQ8 531 aa9.45□□□□□ -0.9
RPE-204ENST00000411934 PXMP2Q9NR77 195 aa9.45□□□□□ -0.9
RPE-204ENST00000411934 FAM184BQ9ULE4 1060 aa9.45□□□□□ -0.9
RPE-204ENST00000411934 LIMCH1Q9UPQ0 1083 aa9.45□□□□□ -0.9
RPE-204ENST00000411934 V9GY48 417 aaPredicted RBP9.45□□□□□ -0.9
RPE-204ENST00000411934 MCM3APO60318 1980 aa9.44□□□□□ -0.9
RPE-204ENST00000411934 MEIS2O14770 477 aa9.44□□□□□ -0.9
RPE-204ENST00000411934 DUSP11O75319 330 aaKnown RBP9.44□□□□□ -0.9
RPE-204ENST00000411934 RARBP10826 455 aa9.44□□□□□ -0.9
RPE-204ENST00000411934 TAL1P17542 331 aaPredicted RBP9.44□□□□□ -0.9
RPE-204ENST00000411934 XBP1P17861 261 aa9.44□□□□□ -0.9
RPE-204ENST00000411934 ADCY7P51828 1080 aa9.44□□□□□ -0.9
RPE-204ENST00000411934 STXBP2Q15833 593 aa9.44□□□□□ -0.9
RPE-204ENST00000411934 PKN1Q16512 942 aa9.44□□□□□ -0.9
RPE-204ENST00000411934 ARHGEF16Q5VV41 709 aa9.44□□□□□ -0.9
RPE-204ENST00000411934 IQSEC1Q6DN90 963 aa9.44□□□□□ -0.9
RPE-204ENST00000411934 UBE2Q1Q7Z7E8 422 aa9.44□□□□□ -0.9
RPE-204ENST00000411934 CMTR1Q8N1G2 835 aaKnown RBP9.44□□□□□ -0.9
RPE-204ENST00000411934 CCDC82Q8N4S0 544 aa9.44□□□□□ -0.9
RPE-204ENST00000411934 ARRDC4Q8NCT1 418 aa9.44□□□□□ -0.9
RPE-204ENST00000411934 TRPV1Q8NER1 839 aa9.44□□□□□ -0.9
RPE-204ENST00000411934 SMARCC2Q8TAQ2 1214 aa9.44□□□□□ -0.9
RPE-204ENST00000411934 SCFD2Q8WU76 684 aa9.44□□□□□ -0.9
RPE-204ENST00000411934 PDCD2LQ9BRP1 358 aa9.44□□□□□ -0.9
RPE-204ENST00000411934 SPC25Q9HBM1 224 aa9.44□□□□□ -0.9
RPE-204ENST00000411934 NCOA5Q9HCD5 579 aaKnown RBP9.44□□□□□ -0.9
RPE-204ENST00000411934 C6orf50Q9HD87 102 aa9.44□□□□□ -0.9
RPE-204ENST00000411934 COL20A1Q9P218 1284 aa9.44□□□□□ -0.9
RPE-204ENST00000411934 ZHX1Q9UKY1 873 aaPredicted RBP9.44□□□□□ -0.9
RPE-204ENST00000411934 KIAA1217Q5T5P2 1943 aa9.43□□□□□ -0.9
RPE-204ENST00000411934 POTEFA5A3E0 1075 aa9.43□□□□□ -0.9
RPE-204ENST00000411934 SPDYE3A6NKU9 549 aa9.43□□□□□ -0.9
RPE-204ENST00000411934 DNM1LO00429 736 aa9.43□□□□□ -0.9
RPE-204ENST00000411934 EIF3JO75822 258 aaKnown RBP9.43□□□□□ -0.9
RPE-204ENST00000411934 NR3C2P08235 984 aa9.43□□□□□ -0.9
RPE-204ENST00000411934 TGFB3P10600 412 aa9.43□□□□□ -0.9
RPE-204ENST00000411934 CNGA1P29973 690 aa9.43□□□□□ -0.9
RPE-204ENST00000411934 CCND2P30279 289 aa9.43□□□□□ -0.9
RPE-204ENST00000411934 CLK2P49760 499 aaKnown RBP9.43□□□□□ -0.9
RPE-204ENST00000411934 CCT2P78371 535 aaKnown RBP9.43□□□□□ -0.9
RPE-204ENST00000411934 HMGN5P82970 282 aaKnown RBP9.43□□□□□ -0.9
RPE-204ENST00000411934 TTLL4Q14679 1199 aa9.43□□□□□ -0.9
RPE-204ENST00000411934 PGM5Q15124 567 aa9.43□□□□□ -0.9
RPE-204ENST00000411934 ME3Q16798 604 aa9.43□□□□□ -0.9
RPE-204ENST00000411934 CCDC144BQ3MJ40 725 aa9.43□□□□□ -0.9
RPE-204ENST00000411934 GNPTABQ3T906 1256 aa9.43□□□□□ -0.9
RPE-204ENST00000411934 DUSP28Q4G0W2 176 aa9.43□□□□□ -0.9
RPE-204ENST00000411934 PCNX4Q63HM2 1172 aa9.43□□□□□ -0.9
RPE-204ENST00000411934 DAGLBQ8NCG7 672 aa9.43□□□□□ -0.9
RPE-204ENST00000411934 GPKOWQ92917 476 aaPredicted RBP eCLIP9.43□□□□□ -0.9
RPE-204ENST00000411934 PHKBQ93100 1093 aa9.43□□□□□ -0.9
RPE-204ENST00000411934 TAAR1Q96RJ0 339 aa9.43□□□□□ -0.9
RPE-204ENST00000411934 TSEN34Q9BSV6 310 aaKnown RBP9.43□□□□□ -0.9
RPE-204ENST00000411934 SLC26A6Q9BXS9 759 aa9.43□□□□□ -0.9
RPE-204ENST00000411934 SEZ6LQ9BYH1 1024 aa9.43□□□□□ -0.9
RPE-204ENST00000411934 UPF3AQ9H1J1 476 aaKnown RBP9.43□□□□□ -0.9
RPE-204ENST00000411934 SMCO2A6NFE2 343 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms