RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 HERVK_113Q902F9 699 aa16.92■□□□□ 0.3
MCF2L-210ENST00000409954 TBC1D5Q92609 795 aa16.92■□□□□ 0.3
MCF2L-210ENST00000409954 TAAR1Q96RJ0 339 aa16.92■□□□□ 0.3
MCF2L-210ENST00000409954 AMNQ9BXJ7 453 aa16.92■□□□□ 0.3
MCF2L-210ENST00000409954 ERICH2A1L162 156 aa16.91■□□□□ 0.3
MCF2L-210ENST00000409954 ACRP10323 421 aa16.91■□□□□ 0.3
MCF2L-210ENST00000409954 GSPT1P15170 499 aaKnown RBP16.91■□□□□ 0.3
MCF2L-210ENST00000409954 PTGS1P23219 599 aa16.91■□□□□ 0.3
MCF2L-210ENST00000409954 PTPN11Q06124 597 aaPredicted RBP16.91■□□□□ 0.3
MCF2L-210ENST00000409954 SEC23AQ15436 765 aa16.91■□□□□ 0.3
MCF2L-210ENST00000409954 RMDN3Q96TC7 470 aa16.91■□□□□ 0.3
MCF2L-210ENST00000409954 NOC4LQ9BVI4 516 aaKnown RBP16.91■□□□□ 0.3
MCF2L-210ENST00000409954 EIF3JO75822 258 aaKnown RBP16.9■□□□□ 0.3
MCF2L-210ENST00000409954 DNAJB2P25686 324 aa16.9■□□□□ 0.3
MCF2L-210ENST00000409954 ARHGEF16Q5VV41 709 aa16.9■□□□□ 0.3
MCF2L-210ENST00000409954 NFRKBQ6P4R8 1299 aa16.9■□□□□ 0.3
MCF2L-210ENST00000409954 CCDC62Q6P9F0 684 aa16.9■□□□□ 0.3
MCF2L-210ENST00000409954 TIFAQ96CG3 184 aa16.9■□□□□ 0.3
MCF2L-210ENST00000409954 ZNF576Q9H609 170 aa16.9■□□□□ 0.3
MCF2L-210ENST00000409954 MCM3APO60318 1980 aa16.89■□□□□ 0.3
MCF2L-210ENST00000409954 PALM3A6NDB9 673 aaPredicted RBP16.89■□□□□ 0.29
MCF2L-210ENST00000409954 IFIT3O14879 490 aaKnown RBP16.89■□□□□ 0.29
MCF2L-210ENST00000409954 ZBTB5O15062 677 aa16.89■□□□□ 0.29
MCF2L-210ENST00000409954 GH1P01241 217 aa16.89■□□□□ 0.29
MCF2L-210ENST00000409954 PFKMP08237 780 aa16.89■□□□□ 0.29
MCF2L-210ENST00000409954 CCL23P55773 120 aa16.89■□□□□ 0.29
MCF2L-210ENST00000409954 SART3Q15020 963 aaKnown RBP16.89■□□□□ 0.29
MCF2L-210ENST00000409954 NBPF20Q3BBV1 942 aa16.89■□□□□ 0.29
MCF2L-210ENST00000409954 CYB5R4Q7L1T6 521 aa16.89■□□□□ 0.29
MCF2L-210ENST00000409954 STAG2Q8N3U4 1231 aa16.89■□□□□ 0.29
MCF2L-210ENST00000409954 NCOA7Q8NI08 942 aa16.89■□□□□ 0.29
MCF2L-210ENST00000409954 MTMR8Q96EF0 704 aa16.89■□□□□ 0.29
MCF2L-210ENST00000409954 IL25Q9H293 177 aa16.89■□□□□ 0.29
MCF2L-210ENST00000409954 MAD2L2Q9UI95 211 aa16.89■□□□□ 0.29
MCF2L-210ENST00000409954 MSRAQ9UJ68 235 aa16.89■□□□□ 0.29
MCF2L-210ENST00000409954 CFBP00751 764 aa16.88■□□□□ 0.29
MCF2L-210ENST00000409954 NR3C2P08235 984 aa16.88■□□□□ 0.29
MCF2L-210ENST00000409954 CYP21A2P08686 494 aa16.88■□□□□ 0.29
MCF2L-210ENST00000409954 CASTP20810 708 aaKnown RBP16.88■□□□□ 0.29
MCF2L-210ENST00000409954 GHRHRQ02643 423 aa16.88■□□□□ 0.29
MCF2L-210ENST00000409954 PTH1RQ03431 593 aa16.88■□□□□ 0.29
MCF2L-210ENST00000409954 RAB30Q15771 203 aa16.88■□□□□ 0.29
MCF2L-210ENST00000409954 SEPT14Q6ZU15 432 aa16.88■□□□□ 0.29
MCF2L-210ENST00000409954 RALYLQ86SE5 291 aaKnown RBP16.88■□□□□ 0.29
MCF2L-210ENST00000409954 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.88■□□□□ 0.29
MCF2L-210ENST00000409954 RETREG2Q8NC44 543 aa16.88■□□□□ 0.29
MCF2L-210ENST00000409954 MAFAQ8NHW3 353 aaPredicted RBP16.88■□□□□ 0.29
MCF2L-210ENST00000409954 MYLIPQ8WY64 445 aa16.88■□□□□ 0.29
MCF2L-210ENST00000409954 PCDHA1Q9Y5I3 950 aa16.88■□□□□ 0.29
MCF2L-210ENST00000409954 SGSM2O43147 1006 aa16.87■□□□□ 0.29
MCF2L-210ENST00000409954 FOSL2P15408 326 aa16.87■□□□□ 0.29
MCF2L-210ENST00000409954 HSD17B4P51659 736 aa16.87■□□□□ 0.29
MCF2L-210ENST00000409954 GRIN2CQ14957 1233 aa16.87■□□□□ 0.29
MCF2L-210ENST00000409954 FAM47CQ5HY64 1035 aa16.87■□□□□ 0.29
MCF2L-210ENST00000409954 KCNV1Q6PIU1 500 aa16.87■□□□□ 0.29
MCF2L-210ENST00000409954 STOX1Q6ZVD7 989 aa16.87■□□□□ 0.29
MCF2L-210ENST00000409954 COPS5Q92905 334 aa16.87■□□□□ 0.29
MCF2L-210ENST00000409954 MAP4K1Q92918 833 aa16.87■□□□□ 0.29
MCF2L-210ENST00000409954 PBX4Q9BYU1 374 aa16.87■□□□□ 0.29
MCF2L-210ENST00000409954 RIOX1Q9H6W3 641 aa16.87■□□□□ 0.29
MCF2L-210ENST00000409954 TRMT13Q9NUP7 481 aaKnown RBP16.87■□□□□ 0.29
MCF2L-210ENST00000409954 COL20A1Q9P218 1284 aa16.87■□□□□ 0.29
MCF2L-210ENST00000409954 E7EWF7 191 aa16.86■□□□□ 0.29
MCF2L-210ENST00000409954 ARIH2O95376 493 aa16.86■□□□□ 0.29
MCF2L-210ENST00000409954 CYP2C9P11712 490 aa16.86■□□□□ 0.29
MCF2L-210ENST00000409954 RFC2P35250 354 aa16.86■□□□□ 0.29
MCF2L-210ENST00000409954 LAMC2Q13753 1193 aa16.86■□□□□ 0.29
MCF2L-210ENST00000409954 WTAPQ15007 396 aa16.86■□□□□ 0.29
MCF2L-210ENST00000409954 LY6KQ17RY6 165 aa16.86■□□□□ 0.29
MCF2L-210ENST00000409954 OTOP2Q7RTS6 562 aa16.86■□□□□ 0.29
MCF2L-210ENST00000409954 TMTC2Q8N394 836 aa16.86■□□□□ 0.29
MCF2L-210ENST00000409954 AFG1LQ8WV93 481 aa16.86■□□□□ 0.29
MCF2L-210ENST00000409954 MTA3Q9BTC8 594 aa16.86■□□□□ 0.29
MCF2L-210ENST00000409954 WNT8AQ9H1J5 351 aa16.86■□□□□ 0.29
MCF2L-210ENST00000409954 PXMP2Q9NR77 195 aa16.86■□□□□ 0.29
MCF2L-210ENST00000409954 DDX41Q9UJV9 622 aaKnown RBP16.86■□□□□ 0.29
MCF2L-210ENST00000409954 SLC4A7Q9Y6M7 1214 aa16.86■□□□□ 0.29
MCF2L-210ENST00000409954 UMODL1Q5DID0 1318 aa16.86■□□□□ 0.29
MCF2L-210ENST00000409954 PNMA6FA0A0J9YX94 578 aa16.85■□□□□ 0.29
MCF2L-210ENST00000409954 PITPNM1O00562 1244 aa16.85■□□□□ 0.29
MCF2L-210ENST00000409954 TGFB3P10600 412 aa16.85■□□□□ 0.29
MCF2L-210ENST00000409954 BFSP2Q13515 415 aa16.85■□□□□ 0.29
MCF2L-210ENST00000409954 GRM4Q14833 912 aa16.85■□□□□ 0.29
MCF2L-210ENST00000409954 DGKDQ16760 1214 aa16.85■□□□□ 0.29
MCF2L-210ENST00000409954 CATIPQ7Z7H3 387 aa16.85■□□□□ 0.29
MCF2L-210ENST00000409954 VSIG10LQ86VR7 867 aa16.85■□□□□ 0.29
MCF2L-210ENST00000409954 EMID1Q96A84 441 aaPredicted RBP16.85■□□□□ 0.29
MCF2L-210ENST00000409954 MAP3K14Q99558 947 aa16.85■□□□□ 0.29
MCF2L-210ENST00000409954 NOD1Q9Y239 953 aa16.85■□□□□ 0.29
MCF2L-210ENST00000409954 GRXCR1A8MXD5 290 aa16.84■□□□□ 0.29
MCF2L-210ENST00000409954 GCOM1H8Y6P7 765 aaPredicted RBP16.84■□□□□ 0.29
MCF2L-210ENST00000409954 PPFIA4O75335 1185 aa16.84■□□□□ 0.29
MCF2L-210ENST00000409954 POLR2MP0CAP2 368 aa16.84■□□□□ 0.29
MCF2L-210ENST00000409954 ACTN1P12814 892 aa16.84■□□□□ 0.29
MCF2L-210ENST00000409954 EIF2AK2P19525 551 aaKnown RBP16.84■□□□□ 0.29
MCF2L-210ENST00000409954 SMARCA1P28370 1054 aa16.84■□□□□ 0.29
MCF2L-210ENST00000409954 ARHGAP1Q07960 439 aa16.84■□□□□ 0.29
MCF2L-210ENST00000409954 TROAPQ12815 778 aa16.84■□□□□ 0.29
MCF2L-210ENST00000409954 SESTD1Q86VW0 696 aa16.84■□□□□ 0.29
MCF2L-210ENST00000409954 DHX37Q8IY37 1157 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms