RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 TXNP10599 105 aaKnown RBP10.53□□□□□ -0.72
SNORD88A-201ENST00000408314 SMARCA1P28370 1054 aa10.53□□□□□ -0.72
SNORD88A-201ENST00000408314 FAM109BQ6ICB4 259 aaPredicted RBP10.53□□□□□ -0.72
SNORD88A-201ENST00000408314 MFSD5Q6N075 450 aa10.53□□□□□ -0.72
SNORD88A-201ENST00000408314 PSRC1Q6PGN9 363 aaPredicted RBP10.53□□□□□ -0.72
SNORD88A-201ENST00000408314 KCNV1Q6PIU1 500 aa10.53□□□□□ -0.72
SNORD88A-201ENST00000408314 NFXL1Q6ZNB6 911 aa10.53□□□□□ -0.72
SNORD88A-201ENST00000408314 SH3RF1Q7Z6J0 888 aa10.53□□□□□ -0.72
SNORD88A-201ENST00000408314 HOMER1Q86YM7 354 aa10.53□□□□□ -0.72
SNORD88A-201ENST00000408314 FAM126BQ8IXS8 530 aa10.53□□□□□ -0.72
SNORD88A-201ENST00000408314 MB21D2Q8IYB1 491 aaPredicted RBP10.53□□□□□ -0.72
SNORD88A-201ENST00000408314 MTMR8Q96EF0 704 aa10.53□□□□□ -0.72
SNORD88A-201ENST00000408314 LRCH3Q96II8 777 aa10.53□□□□□ -0.72
SNORD88A-201ENST00000408314 RNPC3Q96LT9 517 aaKnown RBP10.53□□□□□ -0.72
SNORD88A-201ENST00000408314 MTG1Q9BT17 334 aaPredicted RBP10.53□□□□□ -0.72
SNORD88A-201ENST00000408314 CPVLQ9H3G5 476 aa10.53□□□□□ -0.72
SNORD88A-201ENST00000408314 RIOX1Q9H6W3 641 aa10.53□□□□□ -0.72
SNORD88A-201ENST00000408314 TMEM265A0A087WTH1 108 aa10.52□□□□□ -0.73
SNORD88A-201ENST00000408314 PNMA6FA0A0J9YX94 578 aa10.52□□□□□ -0.73
SNORD88A-201ENST00000408314 GCOM1H8Y6P7 765 aaPredicted RBP10.52□□□□□ -0.73
SNORD88A-201ENST00000408314 PRC1O43663 620 aa10.52□□□□□ -0.73
SNORD88A-201ENST00000408314 GH1P01241 217 aa10.52□□□□□ -0.73
SNORD88A-201ENST00000408314 POLR2MP0CAP2 368 aa10.52□□□□□ -0.73
SNORD88A-201ENST00000408314 LIFRP42702 1097 aa10.52□□□□□ -0.73
SNORD88A-201ENST00000408314 HSD17B4P51659 736 aa10.52□□□□□ -0.73
SNORD88A-201ENST00000408314 SMAD3P84022 425 aaKnown RBP10.52□□□□□ -0.73
SNORD88A-201ENST00000408314 PTPN11Q06124 597 aaPredicted RBP10.52□□□□□ -0.73
SNORD88A-201ENST00000408314 TROAPQ12815 778 aa10.52□□□□□ -0.73
SNORD88A-201ENST00000408314 KRT32Q14532 448 aa10.52□□□□□ -0.73
SNORD88A-201ENST00000408314 ZNF697Q5TEC3 545 aa10.52□□□□□ -0.73
SNORD88A-201ENST00000408314 SYNE3Q6ZMZ3 975 aa10.52□□□□□ -0.73
SNORD88A-201ENST00000408314 ZNF654Q8IZM8 581 aa10.52□□□□□ -0.73
SNORD88A-201ENST00000408314 STAG2Q8N3U4 1231 aa10.52□□□□□ -0.73
SNORD88A-201ENST00000408314 DEFB123Q8N688 67 aa10.52□□□□□ -0.73
SNORD88A-201ENST00000408314 SLC43A3Q8NBI5 491 aa10.52□□□□□ -0.73
SNORD88A-201ENST00000408314 CUL5Q93034 780 aa10.52□□□□□ -0.73
SNORD88A-201ENST00000408314 RRP36Q96EU6 259 aaKnown RBP10.52□□□□□ -0.73
SNORD88A-201ENST00000408314 CCDC136Q96JN2 1154 aa10.52□□□□□ -0.73
SNORD88A-201ENST00000408314 PURBQ96QR8 312 aaKnown RBP10.52□□□□□ -0.73
SNORD88A-201ENST00000408314 SPZ1Q9BXG8 430 aa10.52□□□□□ -0.73
SNORD88A-201ENST00000408314 LSG1Q9H089 658 aaKnown RBP10.52□□□□□ -0.73
SNORD88A-201ENST00000408314 A6NJR5 290 aa10.51□□□□□ -0.73
SNORD88A-201ENST00000408314 SLC27A2O14975 620 aa10.51□□□□□ -0.73
SNORD88A-201ENST00000408314 STAM2O75886 525 aa10.51□□□□□ -0.73
SNORD88A-201ENST00000408314 CD4P01730 458 aa10.51□□□□□ -0.73
SNORD88A-201ENST00000408314 NR3C2P08235 984 aa10.51□□□□□ -0.73
SNORD88A-201ENST00000408314 MYL3P08590 195 aa10.51□□□□□ -0.73
SNORD88A-201ENST00000408314 HMGB1P09429 215 aaKnown RBP10.51□□□□□ -0.73
SNORD88A-201ENST00000408314 SHHQ15465 462 aa10.51□□□□□ -0.73
SNORD88A-201ENST00000408314 GNPTABQ3T906 1256 aa10.51□□□□□ -0.73
SNORD88A-201ENST00000408314 CREB3L3Q68CJ9 461 aa10.51□□□□□ -0.73
SNORD88A-201ENST00000408314 NFRKBQ6P4R8 1299 aa10.51□□□□□ -0.73
SNORD88A-201ENST00000408314 STOX1Q6ZVD7 989 aa10.51□□□□□ -0.73
SNORD88A-201ENST00000408314 CCDC155Q8N6L0 562 aa10.51□□□□□ -0.73
SNORD88A-201ENST00000408314 PIGSQ96S52 555 aa10.51□□□□□ -0.73
SNORD88A-201ENST00000408314 HIPK3Q9H422 1215 aa10.51□□□□□ -0.73
SNORD88A-201ENST00000408314 PXMP2Q9NR77 195 aa10.51□□□□□ -0.73
SNORD88A-201ENST00000408314 MRVI1Q9Y6F6 885 aa10.51□□□□□ -0.73
SNORD88A-201ENST00000408314 SH2B2O14492 632 aaPredicted RBP10.5□□□□□ -0.73
SNORD88A-201ENST00000408314 PFKMP08237 780 aa10.5□□□□□ -0.73
SNORD88A-201ENST00000408314 TGFB3P10600 412 aa10.5□□□□□ -0.73
SNORD88A-201ENST00000408314 EIF2AK2P19525 551 aaKnown RBP10.5□□□□□ -0.73
SNORD88A-201ENST00000408314 CASTP20810 708 aaKnown RBP10.5□□□□□ -0.73
SNORD88A-201ENST00000408314 CCND2P30279 289 aa10.5□□□□□ -0.73
SNORD88A-201ENST00000408314 ANTXR2P58335 489 aa10.5□□□□□ -0.73
SNORD88A-201ENST00000408314 PURAQ00577 322 aaKnown RBP10.5□□□□□ -0.73
SNORD88A-201ENST00000408314 LAMC2Q13753 1193 aa10.5□□□□□ -0.73
SNORD88A-201ENST00000408314 FAM47CQ5HY64 1035 aa10.5□□□□□ -0.73
SNORD88A-201ENST00000408314 SEPT14Q6ZU15 432 aa10.5□□□□□ -0.73
SNORD88A-201ENST00000408314 CHST3Q7LGC8 479 aa10.5□□□□□ -0.73
SNORD88A-201ENST00000408314 TEX2Q8IWB9 1127 aa10.5□□□□□ -0.73
SNORD88A-201ENST00000408314 RPUSD2Q8IZ73 545 aaKnown RBP10.5□□□□□ -0.73
SNORD88A-201ENST00000408314 IGDCC4Q8TDY8 1250 aa10.5□□□□□ -0.73
SNORD88A-201ENST00000408314 EMID1Q96A84 441 aaPredicted RBP10.5□□□□□ -0.73
SNORD88A-201ENST00000408314 TAAR1Q96RJ0 339 aa10.5□□□□□ -0.73
SNORD88A-201ENST00000408314 PDCD2LQ9BRP1 358 aa10.5□□□□□ -0.73
SNORD88A-201ENST00000408314 KATNAL1Q9BW62 490 aa10.5□□□□□ -0.73
SNORD88A-201ENST00000408314 PPP1R12CQ9BZL4 782 aa10.5□□□□□ -0.73
SNORD88A-201ENST00000408314 ALDH8A1Q9H2A2 487 aaPredicted RBP10.5□□□□□ -0.73
SNORD88A-201ENST00000408314 LY9Q9HBG7 655 aa10.5□□□□□ -0.73
SNORD88A-201ENST00000408314 NOD1Q9Y239 953 aa10.5□□□□□ -0.73
SNORD88A-201ENST00000408314 SLC12A7Q9Y666 1083 aa10.5□□□□□ -0.73
SNORD88A-201ENST00000408314 IRX5P78411 483 aaPredicted RBP10.49□□□□□ -0.73
SNORD88A-201ENST00000408314 BFSP2Q13515 415 aa10.49□□□□□ -0.73
SNORD88A-201ENST00000408314 NECTIN1Q15223 517 aa10.49□□□□□ -0.73
SNORD88A-201ENST00000408314 DGKDQ16760 1214 aa10.49□□□□□ -0.73
SNORD88A-201ENST00000408314 C9orf50Q5SZB4 431 aa10.49□□□□□ -0.73
SNORD88A-201ENST00000408314 XRRA1Q6P2D8 792 aa10.49□□□□□ -0.73
SNORD88A-201ENST00000408314 CCDC62Q6P9F0 684 aa10.49□□□□□ -0.73
SNORD88A-201ENST00000408314 IL23AQ9NPF7 189 aa10.49□□□□□ -0.73
SNORD88A-201ENST00000408314 RBM28Q9NW13 759 aaKnown RBP10.49□□□□□ -0.73
SNORD88A-201ENST00000408314 COL20A1Q9P218 1284 aa10.49□□□□□ -0.73
SNORD88A-201ENST00000408314 STXBP5LQ9Y2K9 1186 aa10.49□□□□□ -0.73
SNORD88A-201ENST00000408314 DDX49Q9Y6V7 483 aaKnown RBP10.49□□□□□ -0.73
SNORD88A-201ENST00000408314 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.48□□□□□ -0.73
SNORD88A-201ENST00000408314 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.48□□□□□ -0.73
SNORD88A-201ENST00000408314 B4GALT4O60513 344 aa10.48□□□□□ -0.73
SNORD88A-201ENST00000408314 REC8O95072 547 aa10.48□□□□□ -0.73
SNORD88A-201ENST00000408314 MYCLP12524 364 aaPredicted RBP10.48□□□□□ -0.73
SNORD88A-201ENST00000408314 ITGB8P26012 769 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms