RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 RBBP5Q15291 538 aaKnown RBP5.57□□□□□ -1.52
SSR1-202ENST00000397511 ENOX2Q16206 610 aaKnown RBP5.57□□□□□ -1.52
SSR1-202ENST00000397511 WHAMMP3Q1A5X7 153 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 SLC35G1Q2M3R5 365 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 EXOC8Q8IYI6 725 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 CCDC148Q8NFR7 591 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 ZNF483Q8TF39 744 aaPredicted RBP5.57□□□□□ -1.52
SSR1-202ENST00000397511 TNFRSF25Q93038 417 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 CENPHQ9H3R5 247 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 KANSL2Q9H9L4 492 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 PLSCR2Q9NRY7 297 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 TMEM260Q9NX78 707 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 HPCAL4Q9UM19 191 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 ABCA3Q99758 1704 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 DISP2A7MBM2 1401 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 KLRF2D3W0D1 207 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 MEFVO15553 781 aaPredicted RBP5.57□□□□□ -1.52
SSR1-202ENST00000397511 RTN2O75298 545 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 ECM2O94769 699 aaPredicted RBP5.57□□□□□ -1.52
SSR1-202ENST00000397511 TRIM21P19474 475 aaKnown RBP5.57□□□□□ -1.52
SSR1-202ENST00000397511 SMTNP53814 917 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 GNGT1P63211 74 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 PPARDQ03181 441 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 TRAF1Q13077 416 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 NAA25Q14CX7 972 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 PLCB4Q15147 1175 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 TXNRD1Q16881 649 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 CDKAL1Q5VV42 579 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 TPTE2Q6XPS3 522 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 SH3RF1Q7Z6J0 888 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 FBXO33Q7Z6M2 555 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 KIAA1328Q86T90 577 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 CEP57Q86XR8 500 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 NOA1Q8NC60 698 aaKnown RBP5.57□□□□□ -1.52
SSR1-202ENST00000397511 ARHGEF1Q92888 912 aaKnown RBP5.57□□□□□ -1.52
SSR1-202ENST00000397511 TATDN2Q93075 761 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 PAIP2Q9BPZ3 127 aaKnown RBP5.57□□□□□ -1.52
SSR1-202ENST00000397511 TMEM47Q9BQJ4 181 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 SLC39A2Q9NP94 309 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 IGSF5Q9NSI5 407 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 PCDHA6Q9UN73 950 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 PCDHA8Q9Y5H6 950 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 NDUFAB1O14561 156 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 DDAH1O94760 285 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 PARP1P09874 1014 aaKnown RBP5.57□□□□□ -1.52
SSR1-202ENST00000397511 IDEP14735 1019 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 KIF5BP33176 963 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 MATR3P43243 847 aaKnown RBP eCLIP5.57□□□□□ -1.52
SSR1-202ENST00000397511 PDE4DQ08499 809 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 SF3B2Q13435 895 aaKnown RBP5.57□□□□□ -1.52
SSR1-202ENST00000397511 SF3B3Q15393 1217 aaKnown RBP5.57□□□□□ -1.52
SSR1-202ENST00000397511 SNCBQ16143 134 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 NAALADL2Q58DX5 795 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 CNGA4Q8IV77 575 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 GSPT2Q8IYD1 628 aaKnown RBP5.57□□□□□ -1.52
SSR1-202ENST00000397511 LRRC47Q8N1G4 583 aaKnown RBP5.57□□□□□ -1.52
SSR1-202ENST00000397511 SMCR8Q8TEV9 937 aaPredicted RBP5.57□□□□□ -1.52
SSR1-202ENST00000397511 COA7Q96BR5 231 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 CTAGE1Q96RT6 745 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 POLD4Q9HCU8 107 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 DISC1Q9NRI5 854 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 ZNF219Q9P2Y4 722 aaPredicted RBP5.57□□□□□ -1.52
SSR1-202ENST00000397511 ARPP21Q9UBL0 812 aaPredicted RBP5.57□□□□□ -1.52
SSR1-202ENST00000397511 MAD2L2Q9UI95 211 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 CCNL1Q9UK58 526 aaPredicted RBP5.57□□□□□ -1.52
SSR1-202ENST00000397511 PCDHA4Q9UN74 947 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.57□□□□□ -1.52
SSR1-202ENST00000397511 SAMM50Q9Y512 469 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 GOLGA6L7A0A1B0GV03 622 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 SMCO2A6NFE2 343 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 ZNF185O15231 689 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 SSBP05455 408 aaKnown RBP eCLIP5.56□□□□□ -1.52
SSR1-202ENST00000397511 PLEKP08567 350 aaPredicted RBP5.56□□□□□ -1.52
SSR1-202ENST00000397511 PLCG1P19174 1290 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 IBSPP21815 317 aaPredicted RBP5.56□□□□□ -1.52
SSR1-202ENST00000397511 GBP2P32456 591 aaPredicted RBP5.56□□□□□ -1.52
SSR1-202ENST00000397511 RFC4P35249 363 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 SLC8A3P57103 927 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 ASIC1P78348 528 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 STK4Q13043 487 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 LRRC41Q15345 812 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 CCDC40Q4G0X9 1142 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 ZNF658Q5TYW1 1059 aaPredicted RBP5.56□□□□□ -1.52
SSR1-202ENST00000397511 KRT26Q7Z3Y9 468 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 CSGALNACT2Q8N6G5 542 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 CCDC155Q8N6L0 562 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 ANKRD13CQ8N6S4 541 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 CCDC26Q8TAB7 109 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 PIGSQ96S52 555 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 MXD3Q9BW11 206 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 ATP8A2Q9NTI2 1148 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 TBC1D7Q9P0N9 293 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 MYO6Q9UM54 1294 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 DUOX1Q9NRD9 1551 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 CACNA1SQ13698 1873 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 FRMD3A2A2Y4 597 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 POTEMA6NI47 508 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 GTPBP6O43824 516 aaPredicted RBP5.56□□□□□ -1.52
SSR1-202ENST00000397511 GGCXP38435 758 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 ACTN3Q08043 901 aaPredicted RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms