RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 RNF207Q6ZRF8 634 aa12.2□□□□□ -0.46
NUP98-205ENST00000397007 CTU1Q7Z7A3 348 aaKnown RBP12.2□□□□□ -0.46
NUP98-205ENST00000397007 RGS2P41220 211 aa12.19□□□□□ -0.46
NUP98-205ENST00000397007 FLT3LGP49771 235 aa12.19□□□□□ -0.46
NUP98-205ENST00000397007 TOB1P50616 345 aaPredicted RBP12.19□□□□□ -0.46
NUP98-205ENST00000397007 ORC3Q9UBD5 711 aaPredicted RBP12.19□□□□□ -0.46
NUP98-205ENST00000397007 ALAS1P13196 640 aa12.19□□□□□ -0.46
NUP98-205ENST00000397007 GJB2P29033 226 aa12.19□□□□□ -0.46
NUP98-205ENST00000397007 LHX8Q68G74 356 aa12.19□□□□□ -0.46
NUP98-205ENST00000397007 PTCH2Q9Y6C5 1203 aa12.19□□□□□ -0.46
NUP98-205ENST00000397007 MKI67P46013 3256 aaKnown RBP12.19□□□□□ -0.46
NUP98-205ENST00000397007 DTNBO60941 627 aa12.19□□□□□ -0.46
NUP98-205ENST00000397007 STAM2O75886 525 aa12.19□□□□□ -0.46
NUP98-205ENST00000397007 PGK2P07205 417 aa12.19□□□□□ -0.46
NUP98-205ENST00000397007 RESTQ13127 1097 aa12.19□□□□□ -0.46
NUP98-205ENST00000397007 USH1GQ495M9 461 aa12.19□□□□□ -0.46
NUP98-205ENST00000397007 KRT40Q6A162 431 aa12.19□□□□□ -0.46
NUP98-205ENST00000397007 FBXO46Q6PJ61 603 aaPredicted RBP12.19□□□□□ -0.46
NUP98-205ENST00000397007 MTMR6Q9Y217 621 aa12.19□□□□□ -0.46
NUP98-205ENST00000397007 SMCO2A6NFE2 343 aa12.18□□□□□ -0.46
NUP98-205ENST00000397007 Q4G0T1 1027 aa12.18□□□□□ -0.46
NUP98-205ENST00000397007 USP17L6PQ6QN14 398 aa12.18□□□□□ -0.46
NUP98-205ENST00000397007 SLAIN1Q8ND83 568 aa12.18□□□□□ -0.46
NUP98-205ENST00000397007 CUL5Q93034 780 aa12.18□□□□□ -0.46
NUP98-205ENST00000397007 NUDT12Q9BQG2 462 aa12.18□□□□□ -0.46
NUP98-205ENST00000397007 PSTPIP2Q9H939 334 aa12.18□□□□□ -0.46
NUP98-205ENST00000397007 TMEM260Q9NX78 707 aa12.18□□□□□ -0.46
NUP98-205ENST00000397007 DHX15O43143 795 aaKnown RBP12.18□□□□□ -0.46
NUP98-205ENST00000397007 CPXCR1Q8N123 301 aa12.18□□□□□ -0.46
NUP98-205ENST00000397007 WASF1Q92558 559 aa12.18□□□□□ -0.46
NUP98-205ENST00000397007 TINF2Q9BSI4 451 aa12.18□□□□□ -0.46
NUP98-205ENST00000397007 ALG1Q9BT22 464 aa12.18□□□□□ -0.46
NUP98-205ENST00000397007 VAT1LQ9HCJ6 419 aa12.18□□□□□ -0.46
NUP98-205ENST00000397007 SEC63Q9UGP8 760 aaKnown RBP12.18□□□□□ -0.46
NUP98-205ENST00000397007 ITGB5P18084 799 aa12.18□□□□□ -0.46
NUP98-205ENST00000397007 ADCY7P51828 1080 aa12.18□□□□□ -0.46
NUP98-205ENST00000397007 TRIM32Q13049 653 aa12.18□□□□□ -0.46
NUP98-205ENST00000397007 GRM1Q13255 1194 aa12.18□□□□□ -0.46
NUP98-205ENST00000397007 NCAPG2Q86XI2 1143 aa12.18□□□□□ -0.46
NUP98-205ENST00000397007 BLIDQ8IZY5 108 aa12.18□□□□□ -0.46
NUP98-205ENST00000397007 CCDC148Q8NFR7 591 aa12.18□□□□□ -0.46
NUP98-205ENST00000397007 KCNMB3Q9NPA1 279 aa12.18□□□□□ -0.46
NUP98-205ENST00000397007 GCOM1H8Y6P7 765 aaPredicted RBP12.17□□□□□ -0.46
NUP98-205ENST00000397007 POLR2MP0CAP2 368 aa12.17□□□□□ -0.46
NUP98-205ENST00000397007 PPP4R3AQ6IN85 833 aa12.17□□□□□ -0.46
NUP98-205ENST00000397007 HOMER1Q86YM7 354 aa12.17□□□□□ -0.46
NUP98-205ENST00000397007 ETNPPLQ8TBG4 499 aa12.17□□□□□ -0.46
NUP98-205ENST00000397007 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.17□□□□□ -0.46
NUP98-205ENST00000397007 MEIS1O00470 390 aa12.17□□□□□ -0.46
NUP98-205ENST00000397007 CACNB2Q08289 660 aaPredicted RBP12.17□□□□□ -0.46
NUP98-205ENST00000397007 SPIRE1Q08AE8 756 aa12.17□□□□□ -0.46
NUP98-205ENST00000397007 UBE2SQ16763 222 aa12.17□□□□□ -0.46
NUP98-205ENST00000397007 MTMR7Q9Y216 660 aa12.17□□□□□ -0.46
NUP98-205ENST00000397007 Q9Y3F1 56 aa12.17□□□□□ -0.46
NUP98-205ENST00000397007 SPATA31C2B4DYI2 1134 aa12.17□□□□□ -0.46
NUP98-205ENST00000397007 FOSP01100 380 aaPredicted RBP12.17□□□□□ -0.46
NUP98-205ENST00000397007 USP11P51784 963 aa12.17□□□□□ -0.46
NUP98-205ENST00000397007 ORC2Q13416 577 aaPredicted RBP12.17□□□□□ -0.46
NUP98-205ENST00000397007 ARMCX2Q7L311 632 aa12.17□□□□□ -0.46
NUP98-205ENST00000397007 HEATR3Q7Z4Q2 680 aa12.17□□□□□ -0.46
NUP98-205ENST00000397007 TRIM22Q8IYM9 498 aa12.17□□□□□ -0.46
NUP98-205ENST00000397007 FAM86B1E9PN63 330 aa12.16□□□□□ -0.46
NUP98-205ENST00000397007 TNPO2O14787 897 aaKnown RBP12.16□□□□□ -0.46
NUP98-205ENST00000397007 BRD1O95696 1058 aa12.16□□□□□ -0.46
NUP98-205ENST00000397007 FAM86B2P0C5J1 330 aa12.16□□□□□ -0.46
NUP98-205ENST00000397007 CAPN2P17655 700 aa12.16□□□□□ -0.46
NUP98-205ENST00000397007 SYT1P21579 422 aa12.16□□□□□ -0.46
NUP98-205ENST00000397007 CST5P28325 142 aaPredicted RBP12.16□□□□□ -0.46
NUP98-205ENST00000397007 SP2Q02086 613 aa12.16□□□□□ -0.46
NUP98-205ENST00000397007 CCDC12Q8WUD4 166 aaPredicted RBP12.16□□□□□ -0.46
NUP98-205ENST00000397007 ANO3Q9BYT9 981 aa12.16□□□□□ -0.46
NUP98-205ENST00000397007 VTA1Q9NP79 307 aa12.16□□□□□ -0.46
NUP98-205ENST00000397007 KCNJ14Q9UNX9 436 aa12.16□□□□□ -0.46
NUP98-205ENST00000397007 FAM205CA6NFA0 338 aa12.16□□□□□ -0.46
NUP98-205ENST00000397007 ARIH2O95376 493 aa12.16□□□□□ -0.46
NUP98-205ENST00000397007 CCDC82Q8N4S0 544 aa12.16□□□□□ -0.46
NUP98-205ENST00000397007 KLHDC9Q8NEP7 349 aa12.16□□□□□ -0.46
NUP98-205ENST00000397007 MTMR9Q96QG7 549 aa12.16□□□□□ -0.46
NUP98-205ENST00000397007 MYH9P35579 1960 aaKnown RBP12.16□□□□□ -0.46
NUP98-205ENST00000397007 IGKV6D-21A0A0A0MT36 114 aa12.16□□□□□ -0.46
NUP98-205ENST00000397007 ADAMTS4O75173 837 aa12.16□□□□□ -0.46
NUP98-205ENST00000397007 ATG7O95352 703 aa12.16□□□□□ -0.46
NUP98-205ENST00000397007 HMGCRP04035 888 aa12.16□□□□□ -0.46
NUP98-205ENST00000397007 KCNA2P16389 499 aa12.16□□□□□ -0.46
NUP98-205ENST00000397007 HOXA13P31271 388 aaPredicted RBP12.16□□□□□ -0.46
NUP98-205ENST00000397007 HOXC8P31273 242 aa12.16□□□□□ -0.46
NUP98-205ENST00000397007 TMEM63BQ5T3F8 832 aa12.16□□□□□ -0.46
NUP98-205ENST00000397007 SENP7Q9BQF6 1050 aa12.16□□□□□ -0.46
NUP98-205ENST00000397007 PTPRSQ13332 1948 aa12.16□□□□□ -0.46
NUP98-205ENST00000397007 NFASCO94856 1347 aa12.16□□□□□ -0.46
NUP98-205ENST00000397007 CALML3P27482 149 aa12.15□□□□□ -0.46
NUP98-205ENST00000397007 NAPAP54920 295 aa12.15□□□□□ -0.46
NUP98-205ENST00000397007 DDX49Q9Y6V7 483 aaKnown RBP12.15□□□□□ -0.46
NUP98-205ENST00000397007 GNA11P29992 359 aa12.15□□□□□ -0.46
NUP98-205ENST00000397007 NR5A1Q13285 461 aa12.15□□□□□ -0.46
NUP98-205ENST00000397007 KCTD2Q14681 263 aa12.15□□□□□ -0.46
NUP98-205ENST00000397007 CLEC17AQ6ZS10 378 aa12.15□□□□□ -0.46
NUP98-205ENST00000397007 BICD2Q8TD16 824 aa12.15□□□□□ -0.46
NUP98-205ENST00000397007 NSUN6Q8TEA1 469 aaKnown RBP12.15□□□□□ -0.46
NUP98-205ENST00000397007 JADE2Q9NQC1 790 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms