RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 RAB34Q9BZG1 259 aa15.53■□□□□ 0.08
VAPB-202ENST00000395802 BTBD7Q9P203 1132 aa15.53■□□□□ 0.08
VAPB-202ENST00000395802 RBPJLQ9UBG7 517 aa15.53■□□□□ 0.08
VAPB-202ENST00000395802 RIPK3Q9Y572 518 aa15.53■□□□□ 0.08
VAPB-202ENST00000395802 A0A0G2JMZ2 1700 aa15.53■□□□□ 0.08
VAPB-202ENST00000395802 CYP3A7-CYP3A51PA0A087WV96 503 aa15.52■□□□□ 0.08
VAPB-202ENST00000395802 B4DLN1 442 aa15.52■□□□□ 0.08
VAPB-202ENST00000395802 CYP2C8P10632 490 aa15.52■□□□□ 0.08
VAPB-202ENST00000395802 CYP3A7P24462 503 aa15.52■□□□□ 0.08
VAPB-202ENST00000395802 ERVK-9P63128 1117 aa15.52■□□□□ 0.08
VAPB-202ENST00000395802 ERVK-24P63145 666 aa15.52■□□□□ 0.08
VAPB-202ENST00000395802 XRRA1Q6P2D8 792 aa15.52■□□□□ 0.08
VAPB-202ENST00000395802 DTHD1Q6ZMT9 781 aa15.52■□□□□ 0.08
VAPB-202ENST00000395802 CCDC73Q6ZRK6 1079 aa15.52■□□□□ 0.08
VAPB-202ENST00000395802 SYTL5Q8TDW5 730 aaPredicted RBP15.52■□□□□ 0.08
VAPB-202ENST00000395802 PGBD1Q96JS3 809 aa15.52■□□□□ 0.08
VAPB-202ENST00000395802 MPHOSPH6Q99547 160 aaKnown RBP15.52■□□□□ 0.08
VAPB-202ENST00000395802 DDX25Q9UHL0 483 aaKnown RBP15.52■□□□□ 0.08
VAPB-202ENST00000395802 COL11A1P12107 1806 aaPredicted RBP15.52■□□□□ 0.08
VAPB-202ENST00000395802 MARCH6O60337 910 aa15.52■□□□□ 0.07
VAPB-202ENST00000395802 CMA1P23946 247 aa15.52■□□□□ 0.07
VAPB-202ENST00000395802 CIITAP33076 1130 aa15.52■□□□□ 0.07
VAPB-202ENST00000395802 APLP1P51693 650 aa15.52■□□□□ 0.07
VAPB-202ENST00000395802 NOGQ13253 232 aa15.52■□□□□ 0.07
VAPB-202ENST00000395802 PAXIP1Q6ZW49 1069 aaPredicted RBP15.52■□□□□ 0.07
VAPB-202ENST00000395802 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.52■□□□□ 0.07
VAPB-202ENST00000395802 FAM43AQ8N2R8 423 aa15.52■□□□□ 0.07
VAPB-202ENST00000395802 CRYGNQ8WXF5 182 aa15.52■□□□□ 0.07
VAPB-202ENST00000395802 MRPS27Q92552 414 aaKnown RBP15.52■□□□□ 0.07
VAPB-202ENST00000395802 FAM13BQ9NYF5 915 aa15.52■□□□□ 0.07
VAPB-202ENST00000395802 TBX3O15119 743 aa15.51■□□□□ 0.07
VAPB-202ENST00000395802 ALDH1A1P00352 501 aa15.51■□□□□ 0.07
VAPB-202ENST00000395802 OR52Z1P0C646 297 aa15.51■□□□□ 0.07
VAPB-202ENST00000395802 TAL1P17542 331 aaPredicted RBP15.51■□□□□ 0.07
VAPB-202ENST00000395802 SETQ01105 290 aaPredicted RBP15.51■□□□□ 0.07
VAPB-202ENST00000395802 BAATQ14032 418 aaPredicted RBP15.51■□□□□ 0.07
VAPB-202ENST00000395802 CALCRLQ16602 461 aa15.51■□□□□ 0.07
VAPB-202ENST00000395802 TMEM266Q2M3C6 531 aa15.51■□□□□ 0.07
VAPB-202ENST00000395802 Q4G0T1 1027 aa15.51■□□□□ 0.07
VAPB-202ENST00000395802 SLFN12Q8IYM2 578 aa15.51■□□□□ 0.07
VAPB-202ENST00000395802 DNERQ8NFT8 737 aa15.51■□□□□ 0.07
VAPB-202ENST00000395802 NSUN6Q8TEA1 469 aaKnown RBP15.51■□□□□ 0.07
VAPB-202ENST00000395802 TBC1D5Q92609 795 aa15.51■□□□□ 0.07
VAPB-202ENST00000395802 RMDN3Q96TC7 470 aa15.51■□□□□ 0.07
VAPB-202ENST00000395802 PTPN18Q99952 460 aa15.51■□□□□ 0.07
VAPB-202ENST00000395802 PYM1Q9BRP8 204 aaKnown RBP15.51■□□□□ 0.07
VAPB-202ENST00000395802 MOV10L1Q9BXT6 1211 aaKnown RBP15.51■□□□□ 0.07
VAPB-202ENST00000395802 CYP39A1Q9NYL5 469 aa15.51■□□□□ 0.07
VAPB-202ENST00000395802 MORF4L1Q9UBU8 362 aa15.51■□□□□ 0.07
VAPB-202ENST00000395802 ADD3Q9UEY8 706 aaKnown RBP15.51■□□□□ 0.07
VAPB-202ENST00000395802 FAM155AB1AL88 458 aaPredicted RBP15.5■□□□□ 0.07
VAPB-202ENST00000395802 ERCC3P19447 782 aa15.5■□□□□ 0.07
VAPB-202ENST00000395802 LONP1P36776 959 aaKnown RBP15.5■□□□□ 0.07
VAPB-202ENST00000395802 KCTD2Q14681 263 aa15.5■□□□□ 0.07
VAPB-202ENST00000395802 FAM110CQ1W6H9 321 aa15.5■□□□□ 0.07
VAPB-202ENST00000395802 DEFB115Q30KQ5 88 aa15.5■□□□□ 0.07
VAPB-202ENST00000395802 ARHGEF16Q5VV41 709 aa15.5■□□□□ 0.07
VAPB-202ENST00000395802 CAVIN1Q6NZI2 390 aaKnown RBP15.5■□□□□ 0.07
VAPB-202ENST00000395802 IFNL1Q8IU54 200 aa15.5■□□□□ 0.07
VAPB-202ENST00000395802 CCDC34Q96HJ3 373 aa15.5■□□□□ 0.07
VAPB-202ENST00000395802 AK8Q96MA6 479 aa15.5■□□□□ 0.07
VAPB-202ENST00000395802 A1CFQ9NQ94 594 aaKnown RBP15.5■□□□□ 0.07
VAPB-202ENST00000395802 FBXO2Q9UK22 296 aaPredicted RBP15.5■□□□□ 0.07
VAPB-202ENST00000395802 RBBP6Q7Z6E9 1792 aaKnown RBP15.5■□□□□ 0.07
VAPB-202ENST00000395802 FRMPD4Q14CM0 1322 aa15.5■□□□□ 0.07
VAPB-202ENST00000395802 CNMDO75829 334 aa15.5■□□□□ 0.07
VAPB-202ENST00000395802 STAM2O75886 525 aa15.5■□□□□ 0.07
VAPB-202ENST00000395802 TXLNAP40222 546 aa15.5■□□□□ 0.07
VAPB-202ENST00000395802 TM4SF4P48230 202 aa15.5■□□□□ 0.07
VAPB-202ENST00000395802 AXDND1Q5T1B0 1012 aaPredicted RBP15.5■□□□□ 0.07
VAPB-202ENST00000395802 PCNX4Q63HM2 1172 aa15.5■□□□□ 0.07
VAPB-202ENST00000395802 ANKRD13CQ8N6S4 541 aa15.5■□□□□ 0.07
VAPB-202ENST00000395802 MBOAT7Q96N66 472 aa15.5■□□□□ 0.07
VAPB-202ENST00000395802 IWS1Q96ST2 819 aa15.5■□□□□ 0.07
VAPB-202ENST00000395802 TXNRD2Q9NNW7 524 aa15.5■□□□□ 0.07
VAPB-202ENST00000395802 TMEM63CQ9P1W3 806 aa15.5■□□□□ 0.07
VAPB-202ENST00000395802 SMCHD1A6NHR9 2005 aa15.49■□□□□ 0.07
VAPB-202ENST00000395802 RPTORQ8N122 1335 aa15.49■□□□□ 0.07
VAPB-202ENST00000395802 RASSF10A6NK89 507 aa15.49■□□□□ 0.07
VAPB-202ENST00000395802 STRNO43815 780 aa15.49■□□□□ 0.07
VAPB-202ENST00000395802 FCER1AP12319 257 aa15.49■□□□□ 0.07
VAPB-202ENST00000395802 TAF1CQ15572 869 aaPredicted RBP15.49■□□□□ 0.07
VAPB-202ENST00000395802 CEP55Q53EZ4 464 aa15.49■□□□□ 0.07
VAPB-202ENST00000395802 SLC30A10Q6XR72 485 aa15.49■□□□□ 0.07
VAPB-202ENST00000395802 C4orf32Q8N8J7 132 aa15.49■□□□□ 0.07
VAPB-202ENST00000395802 FAM20AQ96MK3 541 aa15.49■□□□□ 0.07
VAPB-202ENST00000395802 ZFYVE28Q9HCC9 887 aa15.49■□□□□ 0.07
VAPB-202ENST00000395802 LOC102724159A0A0B4J2E5 919 aa15.48■□□□□ 0.07
VAPB-202ENST00000395802 VWA3AA6NCI4 1184 aa15.48■□□□□ 0.07
VAPB-202ENST00000395802 WNT7AO00755 349 aa15.48■□□□□ 0.07
VAPB-202ENST00000395802 TDP2O95551 362 aa15.48■□□□□ 0.07
VAPB-202ENST00000395802 FAM160A1Q05DH4 1040 aa15.48■□□□□ 0.07
VAPB-202ENST00000395802 PWP2Q15269 919 aaKnown RBP15.48■□□□□ 0.07
VAPB-202ENST00000395802 PRR16Q569H4 304 aa15.48■□□□□ 0.07
VAPB-202ENST00000395802 POTEEQ6S8J3 1075 aa15.48■□□□□ 0.07
VAPB-202ENST00000395802 NIPA1Q7RTP0 329 aa15.48■□□□□ 0.07
VAPB-202ENST00000395802 FSIP1Q8NA03 581 aa15.48■□□□□ 0.07
VAPB-202ENST00000395802 PXMP2Q9NR77 195 aa15.48■□□□□ 0.07
VAPB-202ENST00000395802 DDX19AQ9NUU7 478 aaKnown RBP15.48■□□□□ 0.07
VAPB-202ENST00000395802 STK24Q9Y6E0 443 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms