RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 SCFD2Q8WU76 684 aa20.93■□□□□ 0.94
PDLIM4-202ENST00000379018 MPHOSPH6Q99547 160 aaKnown RBP20.93■□□□□ 0.94
PDLIM4-202ENST00000379018 XIRP2A4UGR9 3374 aa20.92■□□□□ 0.94
PDLIM4-202ENST00000379018 RBAK-RBAKDNI3L0D1 243 aa20.92■□□□□ 0.94
PDLIM4-202ENST00000379018 ORC4O43929 436 aa20.92■□□□□ 0.94
PDLIM4-202ENST00000379018 PLA2G5P39877 138 aa20.92■□□□□ 0.94
PDLIM4-202ENST00000379018 KCNJ6P48051 423 aa20.92■□□□□ 0.94
PDLIM4-202ENST00000379018 HAND2P61296 217 aa20.92■□□□□ 0.94
PDLIM4-202ENST00000379018 BFSP2Q13515 415 aa20.92■□□□□ 0.94
PDLIM4-202ENST00000379018 NFRKBQ6P4R8 1299 aa20.92■□□□□ 0.94
PDLIM4-202ENST00000379018 TMCO2Q7Z6W1 182 aaPredicted RBP20.92■□□□□ 0.94
PDLIM4-202ENST00000379018 C1QTNF1Q9BXJ1 281 aa20.92■□□□□ 0.94
PDLIM4-202ENST00000379018 ANAPC4Q9UJX5 808 aa20.92■□□□□ 0.94
PDLIM4-202ENST00000379018 TRANK1O15050 2925 aa20.91■□□□□ 0.94
PDLIM4-202ENST00000379018 NKRFO15226 690 aaKnown RBP eCLIP20.91■□□□□ 0.94
PDLIM4-202ENST00000379018 TLL1O43897 1013 aa20.91■□□□□ 0.94
PDLIM4-202ENST00000379018 ARIH2O95376 493 aa20.91■□□□□ 0.94
PDLIM4-202ENST00000379018 PDHBP11177 359 aa20.91■□□□□ 0.94
PDLIM4-202ENST00000379018 COL4A4P53420 1690 aaPredicted RBP20.91■□□□□ 0.94
PDLIM4-202ENST00000379018 CHST3Q7LGC8 479 aa20.91■□□□□ 0.94
PDLIM4-202ENST00000379018 ZBTB47Q9UFB7 747 aaPredicted RBP20.91■□□□□ 0.94
PDLIM4-202ENST00000379018 PCDHB15Q9Y5E8 787 aa20.91■□□□□ 0.94
PDLIM4-202ENST00000379018 LOC102724159A0A0B4J2E5 919 aa20.9■□□□□ 0.94
PDLIM4-202ENST00000379018 PITPNM1O00562 1244 aa20.9■□□□□ 0.94
PDLIM4-202ENST00000379018 GOLGA8HP0CJ92 632 aa20.9■□□□□ 0.94
PDLIM4-202ENST00000379018 GRB10Q13322 594 aa20.9■□□□□ 0.94
PDLIM4-202ENST00000379018 PWP2Q15269 919 aaKnown RBP20.9■□□□□ 0.94
PDLIM4-202ENST00000379018 PTGISQ16647 500 aa20.9■□□□□ 0.94
PDLIM4-202ENST00000379018 PHOSPHO2Q8TCD6 241 aa20.9■□□□□ 0.94
PDLIM4-202ENST00000379018 CPVLQ9H3G5 476 aa20.9■□□□□ 0.94
PDLIM4-202ENST00000379018 EPHX3Q9H6B9 360 aa20.9■□□□□ 0.94
PDLIM4-202ENST00000379018 MTUS1Q9ULD2 1270 aa20.9■□□□□ 0.94
PDLIM4-202ENST00000379018 PTPRSQ13332 1948 aa20.9■□□□□ 0.94
PDLIM4-202ENST00000379018 KPNA6O60684 536 aa20.89■□□□□ 0.93
PDLIM4-202ENST00000379018 NOVP48745 357 aa20.89■□□□□ 0.93
PDLIM4-202ENST00000379018 ZNF543Q08ER8 600 aa20.89■□□□□ 0.93
PDLIM4-202ENST00000379018 SEPT14Q6ZU15 432 aa20.89■□□□□ 0.93
PDLIM4-202ENST00000379018 GDPD5Q8WTR4 605 aa20.89■□□□□ 0.93
PDLIM4-202ENST00000379018 AFG1LQ8WV93 481 aa20.89■□□□□ 0.93
PDLIM4-202ENST00000379018 FAM227BQ96M60 508 aa20.89■□□□□ 0.93
PDLIM4-202ENST00000379018 ZBED2Q9BTP6 218 aa20.89■□□□□ 0.93
PDLIM4-202ENST00000379018 A0A0D9SFI3 127 aa20.88■□□□□ 0.93
PDLIM4-202ENST00000379018 LCHNA4D1U4 455 aa20.88■□□□□ 0.93
PDLIM4-202ENST00000379018 A6NJR5 290 aa20.88■□□□□ 0.93
PDLIM4-202ENST00000379018 FGAP02671 866 aa20.88■□□□□ 0.93
PDLIM4-202ENST00000379018 EDNRBP24530 442 aa20.88■□□□□ 0.93
PDLIM4-202ENST00000379018 CCDC155Q8N6L0 562 aa20.88■□□□□ 0.93
PDLIM4-202ENST00000379018 DNERQ8NFT8 737 aa20.88■□□□□ 0.93
PDLIM4-202ENST00000379018 HLA-CQ95604 372 aa20.88■□□□□ 0.93
PDLIM4-202ENST00000379018 EVI5LQ96CN4 794 aa20.88■□□□□ 0.93
PDLIM4-202ENST00000379018 COG5Q9UP83 839 aa20.88■□□□□ 0.93
PDLIM4-202ENST00000379018 B4DLN1 442 aa20.87■□□□□ 0.93
PDLIM4-202ENST00000379018 MRPL12P52815 198 aaKnown RBP20.87■□□□□ 0.93
PDLIM4-202ENST00000379018 PTPN11Q06124 597 aaPredicted RBP20.87■□□□□ 0.93
PDLIM4-202ENST00000379018 LY6KQ17RY6 165 aa20.87■□□□□ 0.93
PDLIM4-202ENST00000379018 GDF6Q6KF10 455 aaPredicted RBP20.87■□□□□ 0.93
PDLIM4-202ENST00000379018 ZKSCAN3Q9BRR0 538 aa20.87■□□□□ 0.93
PDLIM4-202ENST00000379018 UBA5Q9GZZ9 404 aa20.87■□□□□ 0.93
PDLIM4-202ENST00000379018 HELLSQ9NRZ9 838 aa20.87■□□□□ 0.93
PDLIM4-202ENST00000379018 BAIAP3O94812 1187 aa20.86■□□□□ 0.93
PDLIM4-202ENST00000379018 MMP3P08254 477 aa20.86■□□□□ 0.93
PDLIM4-202ENST00000379018 FGRP09769 529 aa20.86■□□□□ 0.93
PDLIM4-202ENST00000379018 POU3F3P20264 500 aaPredicted RBP20.86■□□□□ 0.93
PDLIM4-202ENST00000379018 WDR5P61964 334 aaKnown RBP20.86■□□□□ 0.93
PDLIM4-202ENST00000379018 DEFB103AP81534 67 aa20.86■□□□□ 0.93
PDLIM4-202ENST00000379018 ALX1Q15699 326 aa20.86■□□□□ 0.93
PDLIM4-202ENST00000379018 ANKRD45Q5TZF3 282 aa20.86■□□□□ 0.93
PDLIM4-202ENST00000379018 FAM117BQ6P1L5 589 aa20.86■□□□□ 0.93
PDLIM4-202ENST00000379018 TCP11L1Q9NUJ3 509 aa20.86■□□□□ 0.93
PDLIM4-202ENST00000379018 PNMA2Q9UL42 364 aa20.86■□□□□ 0.93
PDLIM4-202ENST00000379018 WDR19Q8NEZ3 1342 aa20.85■□□□□ 0.93
PDLIM4-202ENST00000379018 MCMDC2Q4G0Z9 681 aa20.85■□□□□ 0.93
PDLIM4-202ENST00000379018 MFSD6Q6ZSS7 791 aa20.85■□□□□ 0.93
PDLIM4-202ENST00000379018 LRRC8DQ7L1W4 858 aa20.85■□□□□ 0.93
PDLIM4-202ENST00000379018 ZNF589Q86UQ0 364 aaPredicted RBP20.85■□□□□ 0.93
PDLIM4-202ENST00000379018 CAGE1Q8TC20 777 aa20.85■□□□□ 0.93
PDLIM4-202ENST00000379018 AFAP1L1Q8TED9 768 aa20.85■□□□□ 0.93
PDLIM4-202ENST00000379018 TBC1D5Q92609 795 aa20.85■□□□□ 0.93
PDLIM4-202ENST00000379018 ALG1Q9BT22 464 aa20.85■□□□□ 0.93
PDLIM4-202ENST00000379018 BRWD1Q9NSI6 2320 aa20.84■□□□□ 0.93
PDLIM4-202ENST00000379018 FAM86C2PA6NEL3 165 aa20.84■□□□□ 0.93
PDLIM4-202ENST00000379018 LPXNO60711 386 aa20.84■□□□□ 0.93
PDLIM4-202ENST00000379018 GH1P01241 217 aa20.84■□□□□ 0.93
PDLIM4-202ENST00000379018 HSPD1P10809 573 aaKnown RBP20.84■□□□□ 0.93
PDLIM4-202ENST00000379018 SELPP16109 830 aa20.84■□□□□ 0.93
PDLIM4-202ENST00000379018 CDC37Q16543 378 aaPredicted RBP20.84■□□□□ 0.93
PDLIM4-202ENST00000379018 TBC1D10CQ8IV04 446 aa20.84■□□□□ 0.93
PDLIM4-202ENST00000379018 TAAR1Q96RJ0 339 aa20.84■□□□□ 0.93
PDLIM4-202ENST00000379018 CRBNQ96SW2 442 aa20.84■□□□□ 0.93
PDLIM4-202ENST00000379018 LRFN3Q9BTN0 628 aa20.84■□□□□ 0.93
PDLIM4-202ENST00000379018 HCN4Q9Y3Q4 1203 aa20.84■□□□□ 0.93
PDLIM4-202ENST00000379018 SALL3Q9BXA9 1300 aa20.83■□□□□ 0.93
PDLIM4-202ENST00000379018 DHX16O60231 1041 aaKnown RBP20.83■□□□□ 0.93
PDLIM4-202ENST00000379018 SORBS3O60504 671 aa20.83■□□□□ 0.93
PDLIM4-202ENST00000379018 ARHGAP1Q07960 439 aa20.83■□□□□ 0.93
PDLIM4-202ENST00000379018 NMIQ13287 307 aaPredicted RBP20.83■□□□□ 0.93
PDLIM4-202ENST00000379018 DHX38Q92620 1227 aaKnown RBP20.83■□□□□ 0.93
PDLIM4-202ENST00000379018 MYH6P13533 1939 aa20.82■□□□□ 0.92
PDLIM4-202ENST00000379018 NEDD4P46934 1319 aa20.82■□□□□ 0.92
PDLIM4-202ENST00000379018 ZNF286BP0CG31 522 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms