RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 MAP3K20Q9NYL2 800 aaKnown RBP15.92■□□□□ 0.14
UPK1A-202ENST00000379013 FCER1AP12319 257 aa15.91■□□□□ 0.14
UPK1A-202ENST00000379013 MRPL12P52815 198 aaKnown RBP15.91■□□□□ 0.14
UPK1A-202ENST00000379013 LARP1BQ659C4 914 aaKnown RBP15.91■□□□□ 0.14
UPK1A-202ENST00000379013 SNRNP48Q6IEG0 339 aaKnown RBP15.91■□□□□ 0.14
UPK1A-202ENST00000379013 CPXCR1Q8N123 301 aa15.91■□□□□ 0.14
UPK1A-202ENST00000379013 CHST13Q8NET6 341 aa15.91■□□□□ 0.14
UPK1A-202ENST00000379013 CUL5Q93034 780 aa15.91■□□□□ 0.14
UPK1A-202ENST00000379013 FGD4Q96M96 766 aa15.91■□□□□ 0.14
UPK1A-202ENST00000379013 MMP19Q99542 508 aa15.91■□□□□ 0.14
UPK1A-202ENST00000379013 HTATIP2Q9BUP3 242 aa15.91■□□□□ 0.14
UPK1A-202ENST00000379013 C11orf49Q9H6J7 331 aa15.91■□□□□ 0.14
UPK1A-202ENST00000379013 DDX20Q9UHI6 824 aaKnown RBP15.91■□□□□ 0.14
UPK1A-202ENST00000379013 ZNF536O15090 1300 aa15.91■□□□□ 0.14
UPK1A-202ENST00000379013 EVI5O60447 810 aa15.9■□□□□ 0.14
UPK1A-202ENST00000379013 CNGA1P29973 690 aa15.9■□□□□ 0.14
UPK1A-202ENST00000379013 SLC4A3P48751 1232 aa15.9■□□□□ 0.14
UPK1A-202ENST00000379013 NLRP5P59047 1200 aa15.9■□□□□ 0.14
UPK1A-202ENST00000379013 GNL2Q13823 731 aaKnown RBP15.9■□□□□ 0.14
UPK1A-202ENST00000379013 PKN1Q16512 942 aa15.9■□□□□ 0.14
UPK1A-202ENST00000379013 LRRC26Q2I0M4 334 aa15.9■□□□□ 0.14
UPK1A-202ENST00000379013 USH1GQ495M9 461 aa15.9■□□□□ 0.14
UPK1A-202ENST00000379013 WWC2Q6AWC2 1192 aa15.9■□□□□ 0.14
UPK1A-202ENST00000379013 ACAD9Q9H845 621 aa15.9■□□□□ 0.14
UPK1A-202ENST00000379013 EHMT1Q9H9B1 1298 aa15.9■□□□□ 0.14
UPK1A-202ENST00000379013 CIZ1Q9ULV3 898 aaPredicted RBP15.9■□□□□ 0.14
UPK1A-202ENST00000379013 DNAJC25-GNG10A0A024R161 153 aa15.89■□□□□ 0.13
UPK1A-202ENST00000379013 STXBP3O00186 592 aa15.89■□□□□ 0.13
UPK1A-202ENST00000379013 ALAS1P13196 640 aa15.89■□□□□ 0.13
UPK1A-202ENST00000379013 FDPSP14324 419 aaKnown RBP15.89■□□□□ 0.13
UPK1A-202ENST00000379013 CAPN2P17655 700 aa15.89■□□□□ 0.13
UPK1A-202ENST00000379013 FXR1P51114 621 aaKnown RBP eCLIP15.89■□□□□ 0.13
UPK1A-202ENST00000379013 ADCY7P51828 1080 aa15.89■□□□□ 0.13
UPK1A-202ENST00000379013 FBXO18Q8NFZ0 1043 aa15.89■□□□□ 0.13
UPK1A-202ENST00000379013 AGBL1Q96MI9 1066 aa15.89■□□□□ 0.13
UPK1A-202ENST00000379013 ZMYND12Q9H0C1 365 aa15.89■□□□□ 0.13
UPK1A-202ENST00000379013 FOXD4L1Q9NU39 408 aa15.89■□□□□ 0.13
UPK1A-202ENST00000379013 ZMYND8Q9ULU4 1186 aaPredicted RBP15.89■□□□□ 0.13
UPK1A-202ENST00000379013 DDX49Q9Y6V7 483 aaKnown RBP15.89■□□□□ 0.13
UPK1A-202ENST00000379013 hCG_1642624A0A1W2PR95 340 aa15.88■□□□□ 0.13
UPK1A-202ENST00000379013 SNAI1O95863 264 aaPredicted RBP15.88■□□□□ 0.13
UPK1A-202ENST00000379013 ZNF865P0CJ78 1059 aaPredicted RBP15.88■□□□□ 0.13
UPK1A-202ENST00000379013 NUCB2P80303 420 aa15.88■□□□□ 0.13
UPK1A-202ENST00000379013 SLC35G1Q2M3R5 365 aa15.88■□□□□ 0.13
UPK1A-202ENST00000379013 GJC2Q5T442 439 aaPredicted RBP15.88■□□□□ 0.13
UPK1A-202ENST00000379013 C7orf61Q8IZ16 206 aa15.88■□□□□ 0.13
UPK1A-202ENST00000379013 SPRYD3Q8NCJ5 442 aa15.88■□□□□ 0.13
UPK1A-202ENST00000379013 GPKOWQ92917 476 aaPredicted RBP eCLIP15.88■□□□□ 0.13
UPK1A-202ENST00000379013 TRERF1Q96PN7 1200 aa15.88■□□□□ 0.13
UPK1A-202ENST00000379013 TINF2Q9BSI4 451 aa15.88■□□□□ 0.13
UPK1A-202ENST00000379013 PSTPIP2Q9H939 334 aa15.88■□□□□ 0.13
UPK1A-202ENST00000379013 RNF146Q9NTX7 359 aa15.88■□□□□ 0.13
UPK1A-202ENST00000379013 VPS54Q9P1Q0 977 aa15.88■□□□□ 0.13
UPK1A-202ENST00000379013 MYH15Q9Y2K3 1946 aa15.88■□□□□ 0.13
UPK1A-202ENST00000379013 ZNF236Q9UL36 1845 aa15.87■□□□□ 0.13
UPK1A-202ENST00000379013 SMCO2A6NFE2 343 aa15.87■□□□□ 0.13
UPK1A-202ENST00000379013 STX6O43752 255 aa15.87■□□□□ 0.13
UPK1A-202ENST00000379013 PPFIA3O75145 1194 aa15.87■□□□□ 0.13
UPK1A-202ENST00000379013 MMP1P03956 469 aa15.87■□□□□ 0.13
UPK1A-202ENST00000379013 SYN1P17600 705 aa15.87■□□□□ 0.13
UPK1A-202ENST00000379013 KRT2P35908 639 aa15.87■□□□□ 0.13
UPK1A-202ENST00000379013 IRX5P78411 483 aaPredicted RBP15.87■□□□□ 0.13
UPK1A-202ENST00000379013 KRT40Q6A162 431 aa15.87■□□□□ 0.13
UPK1A-202ENST00000379013 REXO1Q8N1G1 1221 aaKnown RBP15.87■□□□□ 0.13
UPK1A-202ENST00000379013 DAGLBQ8NCG7 672 aa15.87■□□□□ 0.13
UPK1A-202ENST00000379013 LENG1Q96BZ8 264 aaPredicted RBP15.87■□□□□ 0.13
UPK1A-202ENST00000379013 MPHOSPH6Q99547 160 aaKnown RBP15.87■□□□□ 0.13
UPK1A-202ENST00000379013 PHF20Q9BVI0 1012 aa15.87■□□□□ 0.13
UPK1A-202ENST00000379013 RIC8AQ9NPQ8 531 aa15.87■□□□□ 0.13
UPK1A-202ENST00000379013 ATP6V1DQ9Y5K8 247 aa15.87■□□□□ 0.13
UPK1A-202ENST00000379013 NR2E3Q9Y5X4 410 aa15.87■□□□□ 0.13
UPK1A-202ENST00000379013 VPS37CA5D8V6 355 aaPredicted RBP15.86■□□□□ 0.13
UPK1A-202ENST00000379013 B4DLN1 442 aa15.86■□□□□ 0.13
UPK1A-202ENST00000379013 GCOM1H8Y6P7 765 aaPredicted RBP15.86■□□□□ 0.13
UPK1A-202ENST00000379013 PIK3CDO00329 1044 aa15.86■□□□□ 0.13
UPK1A-202ENST00000379013 SEPT4O43236 478 aa15.86■□□□□ 0.13
UPK1A-202ENST00000379013 FOSP01100 380 aaPredicted RBP15.86■□□□□ 0.13
UPK1A-202ENST00000379013 POLR2MP0CAP2 368 aa15.86■□□□□ 0.13
UPK1A-202ENST00000379013 SYT1P21579 422 aa15.86■□□□□ 0.13
UPK1A-202ENST00000379013 CNTN2Q02246 1040 aa15.86■□□□□ 0.13
UPK1A-202ENST00000379013 AP3B2Q13367 1082 aa15.86■□□□□ 0.13
UPK1A-202ENST00000379013 KCTD2Q14681 263 aa15.86■□□□□ 0.13
UPK1A-202ENST00000379013 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.86■□□□□ 0.13
UPK1A-202ENST00000379013 PURBQ96QR8 312 aaKnown RBP15.86■□□□□ 0.13
UPK1A-202ENST00000379013 SENP6Q9GZR1 1112 aaPredicted RBP15.86■□□□□ 0.13
UPK1A-202ENST00000379013 FOXP1Q9H334 677 aaPredicted RBP15.86■□□□□ 0.13
UPK1A-202ENST00000379013 HOMER2Q9NSB8 354 aa15.86■□□□□ 0.13
UPK1A-202ENST00000379013 PCDHA4Q9UN74 947 aa15.86■□□□□ 0.13
UPK1A-202ENST00000379013 DIS3Q9Y2L1 958 aaKnown RBP15.86■□□□□ 0.13
UPK1A-202ENST00000379013 A0A0C4DFX4 3053 aa15.86■□□□□ 0.13
UPK1A-202ENST00000379013 PLXNA1Q9UIW2 1896 aa15.86■□□□□ 0.13
UPK1A-202ENST00000379013 SPDYE3A6NKU9 549 aa15.85■□□□□ 0.13
UPK1A-202ENST00000379013 ADCY6O43306 1168 aa15.85■□□□□ 0.13
UPK1A-202ENST00000379013 PPP1R11O60927 126 aaPredicted RBP15.85■□□□□ 0.13
UPK1A-202ENST00000379013 ATN1P54259 1190 aaPredicted RBP15.85■□□□□ 0.13
UPK1A-202ENST00000379013 MUM1L1Q5H9M0 696 aa15.85■□□□□ 0.13
UPK1A-202ENST00000379013 BLIDQ8IZY5 108 aa15.85■□□□□ 0.13
UPK1A-202ENST00000379013 ZSCAN16Q9H4T2 348 aaPredicted RBP15.85■□□□□ 0.13
UPK1A-202ENST00000379013 SLC5A4Q9NY91 659 aa15.85■□□□□ 0.13
UPK1A-202ENST00000379013 ASTN1O14525 1302 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms