RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 ABHD16BQ9H3Z7 469 aa21.54■■□□□ 1.04
SSU72-203ENST00000378725 PAK6Q9NQU5 681 aaPredicted RBP21.54■■□□□ 1.04
SSU72-203ENST00000378725 PXMP2Q9NR77 195 aa21.54■■□□□ 1.04
SSU72-203ENST00000378725 ORC3Q9UBD5 711 aaPredicted RBP21.54■■□□□ 1.04
SSU72-203ENST00000378725 CNPY2Q9Y2B0 182 aa21.54■■□□□ 1.04
SSU72-203ENST00000378725 PLXNA1Q9UIW2 1896 aa21.54■■□□□ 1.04
SSU72-203ENST00000378725 ADCY7P51828 1080 aa21.53■■□□□ 1.04
SSU72-203ENST00000378725 ACVR2BQ13705 512 aa21.53■■□□□ 1.04
SSU72-203ENST00000378725 IFFO2Q5TF58 517 aa21.53■■□□□ 1.04
SSU72-203ENST00000378725 ARHGEF16Q5VV41 709 aa21.53■■□□□ 1.04
SSU72-203ENST00000378725 FCHSD1Q86WN1 690 aa21.53■■□□□ 1.04
SSU72-203ENST00000378725 WASF1Q92558 559 aa21.53■■□□□ 1.04
SSU72-203ENST00000378725 AIFM3Q96NN9 605 aa21.53■■□□□ 1.04
SSU72-203ENST00000378725 MPHOSPH6Q99547 160 aaKnown RBP21.53■■□□□ 1.04
SSU72-203ENST00000378725 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.53■■□□□ 1.046e-7■■■■□ 21.6
SSU72-203ENST00000378725 RNF208Q9H0X6 261 aa21.53■■□□□ 1.04
SSU72-203ENST00000378725 VPS54Q9P1Q0 977 aa21.53■■□□□ 1.04
SSU72-203ENST00000378725 DDX49Q9Y6V7 483 aaKnown RBP21.53■■□□□ 1.04
SSU72-203ENST00000378725 HTTP42858 3142 aa21.53■■□□□ 1.04
SSU72-203ENST00000378725 LCTP09848 1927 aa21.53■■□□□ 1.04
SSU72-203ENST00000378725 JAK2O60674 1132 aa21.52■■□□□ 1.04
SSU72-203ENST00000378725 DTNBO60941 627 aa21.52■■□□□ 1.04
SSU72-203ENST00000378725 MYCP01106 439 aaPredicted RBP21.52■■□□□ 1.04
SSU72-203ENST00000378725 GNA11P29992 359 aa21.52■■□□□ 1.04
SSU72-203ENST00000378725 CLK2P49760 499 aaKnown RBP21.52■■□□□ 1.04
SSU72-203ENST00000378725 UBE2SQ16763 222 aa21.52■■□□□ 1.04
SSU72-203ENST00000378725 CCDC148Q8NFR7 591 aa21.52■■□□□ 1.04
SSU72-203ENST00000378725 PDCD2LQ9BRP1 358 aa21.52■■□□□ 1.04
SSU72-203ENST00000378725 C6orf50Q9HD87 102 aa21.52■■□□□ 1.04
SSU72-203ENST00000378725 FRMPD4Q14CM0 1322 aa21.52■■□□□ 1.03
SSU72-203ENST00000378725 GJB1P08034 283 aa21.51■■□□□ 1.03
SSU72-203ENST00000378725 NR3C2P08235 984 aa21.51■■□□□ 1.03
SSU72-203ENST00000378725 EIF2AK2P19525 551 aaKnown RBP21.51■■□□□ 1.03
SSU72-203ENST00000378725 TMEM106CQ9BVX2 250 aa21.51■■□□□ 1.03
SSU72-203ENST00000378725 RBBP6Q7Z6E9 1792 aaKnown RBP21.51■■□□□ 1.03
SSU72-203ENST00000378725 SEPT4O43236 478 aa21.5■■□□□ 1.03
SSU72-203ENST00000378725 PDE4DQ08499 809 aa21.5■■□□□ 1.03
SSU72-203ENST00000378725 PGM5Q15124 567 aa21.5■■□□□ 1.03
SSU72-203ENST00000378725 LHX8Q68G74 356 aa21.5■■□□□ 1.03
SSU72-203ENST00000378725 TAPT1Q6NXT6 567 aa21.5■■□□□ 1.03
SSU72-203ENST00000378725 VSIG10LQ86VR7 867 aa21.5■■□□□ 1.03
SSU72-203ENST00000378725 SNX21Q969T3 373 aa21.5■■□□□ 1.03
SSU72-203ENST00000378725 ALG1Q9BT22 464 aa21.5■■□□□ 1.03
SSU72-203ENST00000378725 VTA1Q9NP79 307 aa21.5■■□□□ 1.03
SSU72-203ENST00000378725 PCDHA6Q9UN73 950 aa21.5■■□□□ 1.03
SSU72-203ENST00000378725 PCDHA8Q9Y5H6 950 aa21.5■■□□□ 1.03
SSU72-203ENST00000378725 RBM47A0AV96 593 aaKnown RBP21.49■■□□□ 1.03
SSU72-203ENST00000378725 CCDC85CA6NKD9 419 aa21.49■■□□□ 1.03
SSU72-203ENST00000378725 ADAMTS3O15072 1205 aa21.49■■□□□ 1.03
SSU72-203ENST00000378725 FOSP01100 380 aaPredicted RBP21.49■■□□□ 1.03
SSU72-203ENST00000378725 CNGA1P29973 690 aa21.49■■□□□ 1.03
SSU72-203ENST00000378725 NLRP5P59047 1200 aa21.49■■□□□ 1.03
SSU72-203ENST00000378725 HMGN5P82970 282 aaKnown RBP21.49■■□□□ 1.03
SSU72-203ENST00000378725 STXBP2Q15833 593 aa21.49■■□□□ 1.03
SSU72-203ENST00000378725 MCTP2Q6DN12 878 aa21.49■■□□□ 1.03
SSU72-203ENST00000378725 GALNT17Q6IS24 598 aa21.49■■□□□ 1.03
SSU72-203ENST00000378725 BICD2Q8TD16 824 aa21.49■■□□□ 1.03
SSU72-203ENST00000378725 DDX20Q9UHI6 824 aaKnown RBP21.49■■□□□ 1.03
SSU72-203ENST00000378725 FAM184BQ9ULE4 1060 aa21.49■■□□□ 1.03
SSU72-203ENST00000378725 SPDYE3A6NKU9 549 aa21.48■■□□□ 1.03
SSU72-203ENST00000378725 MSCO60682 206 aa21.48■■□□□ 1.03
SSU72-203ENST00000378725 EIF3JO75822 258 aaKnown RBP21.48■■□□□ 1.03
SSU72-203ENST00000378725 SGPL1O95470 568 aa21.48■■□□□ 1.03
SSU72-203ENST00000378725 CAPN2P17655 700 aa21.48■■□□□ 1.03
SSU72-203ENST00000378725 XBP1P17861 261 aa21.48■■□□□ 1.03
SSU72-203ENST00000378725 GJA8P48165 433 aa21.48■■□□□ 1.03
SSU72-203ENST00000378725 AP3B2Q13367 1082 aa21.48■■□□□ 1.03
SSU72-203ENST00000378725 NPY5RQ15761 445 aa21.48■■□□□ 1.03
SSU72-203ENST00000378725 EEPD1Q7L9B9 569 aa21.48■■□□□ 1.03
SSU72-203ENST00000378725 DAGLBQ8NCG7 672 aa21.48■■□□□ 1.03
SSU72-203ENST00000378725 DEFB118Q96PH6 123 aa21.48■■□□□ 1.03
SSU72-203ENST00000378725 PHF20Q9BVI0 1012 aa21.48■■□□□ 1.03
SSU72-203ENST00000378725 CRISPLD2Q9H0B8 497 aa21.48■■□□□ 1.03
SSU72-203ENST00000378725 ZHX1Q9UKY1 873 aaPredicted RBP21.48■■□□□ 1.03
SSU72-203ENST00000378725 PCDHA4Q9UN74 947 aa21.48■■□□□ 1.03
SSU72-203ENST00000378725 AKR1A1P14550 325 aa21.47■■□□□ 1.03
SSU72-203ENST00000378725 CUL4AQ13619 759 aa21.47■■□□□ 1.03
SSU72-203ENST00000378725 CCDC144BQ3MJ40 725 aa21.47■■□□□ 1.03
SSU72-203ENST00000378725 IQSEC1Q6DN90 963 aa21.47■■□□□ 1.03
SSU72-203ENST00000378725 XRRA1Q6P2D8 792 aa21.47■■□□□ 1.03
SSU72-203ENST00000378725 FBXO16Q8IX29 292 aaPredicted RBP21.47■■□□□ 1.03
SSU72-203ENST00000378725 IL31RAQ8NI17 732 aa21.47■■□□□ 1.03
SSU72-203ENST00000378725 U2AF1L4Q8WU68 220 aaKnown RBP21.47■■□□□ 1.03
SSU72-203ENST00000378725 PDGFCQ9NRA1 345 aa21.47■■□□□ 1.03
SSU72-203ENST00000378725 TMEM260Q9NX78 707 aa21.47■■□□□ 1.03
SSU72-203ENST00000378725 POTEFA5A3E0 1075 aa21.46■■□□□ 1.03
SSU72-203ENST00000378725 M0R2N6 131 aa21.46■■□□□ 1.03
SSU72-203ENST00000378725 CCND2P30279 289 aa21.46■■□□□ 1.03
SSU72-203ENST00000378725 PCNX4Q63HM2 1172 aa21.46■■□□□ 1.03
SSU72-203ENST00000378725 REXO1Q8N1G1 1221 aaKnown RBP21.46■■□□□ 1.03
SSU72-203ENST00000378725 GJB4Q9NTQ9 266 aa21.46■■□□□ 1.03
SSU72-203ENST00000378725 KCNJ14Q9UNX9 436 aa21.46■■□□□ 1.03
SSU72-203ENST00000378725 STAM2O75886 525 aa21.45■■□□□ 1.02
SSU72-203ENST00000378725 MYCLP12524 364 aaPredicted RBP21.45■■□□□ 1.02
SSU72-203ENST00000378725 MRPS9P82933 396 aaKnown RBP21.45■■□□□ 1.02
SSU72-203ENST00000378725 JAKMIP3Q5VZ66 844 aa21.45■■□□□ 1.02
SSU72-203ENST00000378725 BLIDQ8IZY5 108 aa21.45■■□□□ 1.02
SSU72-203ENST00000378725 ANO3Q9BYT9 981 aa21.45■■□□□ 1.02
SSU72-203ENST00000378725 EHMT1Q9H9B1 1298 aa21.45■■□□□ 1.02
SSU72-203ENST00000378725 OGDHLQ9ULD0 1010 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms