RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 NECAB1Q8N987 351 aa15.22■□□□□ 0.03
CKAP2-202ENST00000378034 TRPV1Q8NER1 839 aa15.22■□□□□ 0.03
CKAP2-202ENST00000378034 CCDC148Q8NFR7 591 aa15.22■□□□□ 0.03
CKAP2-202ENST00000378034 VTA1Q9NP79 307 aa15.22■□□□□ 0.03
CKAP2-202ENST00000378034 MCM3APO60318 1980 aa15.22■□□□□ 0.03
CKAP2-202ENST00000378034 SMCO2A6NFE2 343 aa15.22■□□□□ 0.03
CKAP2-202ENST00000378034 MYCP01106 439 aaPredicted RBP15.22■□□□□ 0.03
CKAP2-202ENST00000378034 ZNF865P0CJ78 1059 aaPredicted RBP15.22■□□□□ 0.03
CKAP2-202ENST00000378034 GJA8P48165 433 aa15.22■□□□□ 0.03
CKAP2-202ENST00000378034 ADCY7P51828 1080 aa15.22■□□□□ 0.03
CKAP2-202ENST00000378034 PDE4DQ08499 809 aa15.22■□□□□ 0.03
CKAP2-202ENST00000378034 PRAMEF19Q5SWL8 479 aa15.22■□□□□ 0.03
CKAP2-202ENST00000378034 MCTP2Q6DN12 878 aa15.22■□□□□ 0.03
CKAP2-202ENST00000378034 TYW1BQ6NUM6 668 aa15.22■□□□□ 0.03
CKAP2-202ENST00000378034 WASF1Q92558 559 aa15.22■□□□□ 0.03
CKAP2-202ENST00000378034 LLPHQ9BRT6 129 aaKnown RBP15.22■□□□□ 0.03
CKAP2-202ENST00000378034 ZMYND12Q9H0C1 365 aa15.22■□□□□ 0.03
CKAP2-202ENST00000378034 PXMP2Q9NR77 195 aa15.22■□□□□ 0.03
CKAP2-202ENST00000378034 SGPL1O95470 568 aa15.21■□□□□ 0.03
CKAP2-202ENST00000378034 CTDNEP1O95476 244 aa15.21■□□□□ 0.03
CKAP2-202ENST00000378034 CNGA1P29973 690 aa15.21■□□□□ 0.03
CKAP2-202ENST00000378034 GNA11P29992 359 aa15.21■□□□□ 0.03
CKAP2-202ENST00000378034 USP17L6PQ6QN14 398 aa15.21■□□□□ 0.03
CKAP2-202ENST00000378034 KATNBL1Q9H079 304 aa15.21■□□□□ 0.03
CKAP2-202ENST00000378034 C6orf50Q9HD87 102 aa15.21■□□□□ 0.03
CKAP2-202ENST00000378034 DDX20Q9UHI6 824 aaKnown RBP15.21■□□□□ 0.03
CKAP2-202ENST00000378034 FAM184BQ9ULE4 1060 aa15.21■□□□□ 0.03
CKAP2-202ENST00000378034 FRMPD4Q14CM0 1322 aa15.21■□□□□ 0.02
CKAP2-202ENST00000378034 LRRC37A2A6NM11 1700 aa15.21■□□□□ 0.02
CKAP2-202ENST00000378034 AKR1A1P14550 325 aa15.2■□□□□ 0.02
CKAP2-202ENST00000378034 FCHSD1Q86WN1 690 aa15.2■□□□□ 0.02
CKAP2-202ENST00000378034 NSUN7Q8NE18 718 aaKnown RBP15.2■□□□□ 0.02
CKAP2-202ENST00000378034 BICD2Q8TD16 824 aa15.2■□□□□ 0.02
CKAP2-202ENST00000378034 U2AF1L4Q8WU68 220 aaKnown RBP15.2■□□□□ 0.02
CKAP2-202ENST00000378034 DEFB118Q96PH6 123 aa15.2■□□□□ 0.02
CKAP2-202ENST00000378034 PDCD2LQ9BRP1 358 aa15.2■□□□□ 0.02
CKAP2-202ENST00000378034 ZHX1Q9UKY1 873 aaPredicted RBP15.2■□□□□ 0.02
CKAP2-202ENST00000378034 PPFIA3O75145 1194 aa15.2■□□□□ 0.02
CKAP2-202ENST00000378034 FOSP01100 380 aaPredicted RBP15.2■□□□□ 0.02
CKAP2-202ENST00000378034 XBP1P17861 261 aa15.2■□□□□ 0.02
CKAP2-202ENST00000378034 STXBP2Q15833 593 aa15.2■□□□□ 0.02
CKAP2-202ENST00000378034 CRISPLD2Q9H0B8 497 aa15.2■□□□□ 0.02
CKAP2-202ENST00000378034 EHMT1Q9H9B1 1298 aa15.2■□□□□ 0.02
CKAP2-202ENST00000378034 ORC3Q9UBD5 711 aaPredicted RBP15.2■□□□□ 0.02
CKAP2-202ENST00000378034 SPDYE3A6NKU9 549 aa15.19■□□□□ 0.02
CKAP2-202ENST00000378034 EIF3JO75822 258 aaKnown RBP15.19■□□□□ 0.02
CKAP2-202ENST00000378034 NR3C2P08235 984 aa15.19■□□□□ 0.02
CKAP2-202ENST00000378034 EIF2AK2P19525 551 aaKnown RBP15.19■□□□□ 0.02
CKAP2-202ENST00000378034 AP3B2Q13367 1082 aa15.19■□□□□ 0.02
CKAP2-202ENST00000378034 PGM5Q15124 567 aa15.19■□□□□ 0.02
CKAP2-202ENST00000378034 LHX8Q68G74 356 aa15.19■□□□□ 0.02
CKAP2-202ENST00000378034 IQSEC1Q6DN90 963 aa15.19■□□□□ 0.02
CKAP2-202ENST00000378034 GALNT17Q6IS24 598 aa15.19■□□□□ 0.02
CKAP2-202ENST00000378034 XRRA1Q6P2D8 792 aa15.19■□□□□ 0.02
CKAP2-202ENST00000378034 RBM47A0AV96 593 aaKnown RBP15.18■□□□□ 0.02
CKAP2-202ENST00000378034 STAM2O75886 525 aa15.18■□□□□ 0.02
CKAP2-202ENST00000378034 CLK2P49760 499 aaKnown RBP15.18■□□□□ 0.02
CKAP2-202ENST00000378034 ST3GAL1Q11201 340 aa15.18■□□□□ 0.02
CKAP2-202ENST00000378034 CCDC144BQ3MJ40 725 aa15.18■□□□□ 0.02
CKAP2-202ENST00000378034 TAPT1Q6NXT6 567 aa15.18■□□□□ 0.02
CKAP2-202ENST00000378034 VSIG10LQ86VR7 867 aa15.18■□□□□ 0.02
CKAP2-202ENST00000378034 CCDC83Q8IWF9 413 aa15.18■□□□□ 0.02
CKAP2-202ENST00000378034 VPS54Q9P1Q0 977 aa15.18■□□□□ 0.02
CKAP2-202ENST00000378034 OGDHLQ9ULD0 1010 aa15.18■□□□□ 0.02
CKAP2-202ENST00000378034 POTEFA5A3E0 1075 aa15.18■□□□□ 0.02
CKAP2-202ENST00000378034 TFRCP02786 760 aaKnown RBP15.18■□□□□ 0.02
CKAP2-202ENST00000378034 RARBP10826 455 aa15.18■□□□□ 0.02
CKAP2-202ENST00000378034 CCND2P30279 289 aa15.18■□□□□ 0.02
CKAP2-202ENST00000378034 UBE2SQ16763 222 aa15.18■□□□□ 0.02
CKAP2-202ENST00000378034 ANKLE1Q8NAG6 615 aa15.18■□□□□ 0.02
CKAP2-202ENST00000378034 FRMPD3Q5JV73 1810 aa15.18■□□□□ 0.02
CKAP2-202ENST00000378034 FDPSP14324 419 aaKnown RBP15.17■□□□□ 0.02
CKAP2-202ENST00000378034 NLRP5P59047 1200 aa15.17■□□□□ 0.02
CKAP2-202ENST00000378034 HMGN5P82970 282 aaKnown RBP15.17■□□□□ 0.02
CKAP2-202ENST00000378034 FBXO16Q8IX29 292 aaPredicted RBP15.17■□□□□ 0.02
CKAP2-202ENST00000378034 REXO1Q8N1G1 1221 aaKnown RBP15.17■□□□□ 0.02
CKAP2-202ENST00000378034 SCFD2Q8WU76 684 aa15.17■□□□□ 0.02
CKAP2-202ENST00000378034 TMX3Q96JJ7 454 aa15.17■□□□□ 0.02
CKAP2-202ENST00000378034 PCDHA6Q9UN73 950 aa15.17■□□□□ 0.02
CKAP2-202ENST00000378034 PCDHA8Q9Y5H6 950 aa15.17■□□□□ 0.02
CKAP2-202ENST00000378034 DUSP11O75319 330 aaKnown RBP15.16■□□□□ 0.02
CKAP2-202ENST00000378034 CD2BP2O95400 341 aaKnown RBP15.16■□□□□ 0.02
CKAP2-202ENST00000378034 SOX10P56693 466 aa15.16■□□□□ 0.02
CKAP2-202ENST00000378034 TNFAIP2Q03169 654 aa15.16■□□□□ 0.02
CKAP2-202ENST00000378034 PCNX4Q63HM2 1172 aa15.16■□□□□ 0.02
CKAP2-202ENST00000378034 EEPD1Q7L9B9 569 aa15.16■□□□□ 0.02
CKAP2-202ENST00000378034 DAGLBQ8NCG7 672 aa15.16■□□□□ 0.02
CKAP2-202ENST00000378034 ALG1Q9BT22 464 aa15.16■□□□□ 0.02
CKAP2-202ENST00000378034 Q9Y3F1 56 aa15.16■□□□□ 0.02
CKAP2-202ENST00000378034 DDX49Q9Y6V7 483 aaKnown RBP15.16■□□□□ 0.02
CKAP2-202ENST00000378034 KIAA1217Q5T5P2 1943 aa15.16■□□□□ 0.02
CKAP2-202ENST00000378034 MYCLP12524 364 aaPredicted RBP15.16■□□□□ 0.02
CKAP2-202ENST00000378034 KCNV1Q6PIU1 500 aa15.16■□□□□ 0.02
CKAP2-202ENST00000378034 ARRDC4Q8NCT1 418 aa15.16■□□□□ 0.02
CKAP2-202ENST00000378034 SHISA4Q96DD7 197 aa15.16■□□□□ 0.02
CKAP2-202ENST00000378034 PCDHA4Q9UN74 947 aa15.16■□□□□ 0.02
CKAP2-202ENST00000378034 CENPFP49454 3210 aa15.16■□□□□ 0.02
CKAP2-202ENST00000378034 KIAA0100Q14667 2235 aaKnown RBP15.16■□□□□ 0.02
CKAP2-202ENST00000378034 NKRFO15226 690 aaKnown RBP eCLIP15.15■□□□□ 0.02
CKAP2-202ENST00000378034 JAK2O60674 1132 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms