RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 LRRC37AA6NMS7 1700 aa16.92■□□□□ 0.3
MSH5-203ENST00000375750 COL11A2P13942 1736 aaPredicted RBP16.92■□□□□ 0.3
MSH5-203ENST00000375750 EPHB6O15197 1021 aa16.92■□□□□ 0.3
MSH5-203ENST00000375750 CALM1P0DP23 149 aa16.92■□□□□ 0.3
MSH5-203ENST00000375750 CALM2P0DP24 149 aa16.92■□□□□ 0.3
MSH5-203ENST00000375750 CALM3P0DP25 149 aa16.92■□□□□ 0.3
MSH5-203ENST00000375750 LONP1P36776 959 aaKnown RBP16.92■□□□□ 0.3
MSH5-203ENST00000375750 CCDC178Q5BJE1 867 aa16.92■□□□□ 0.3
MSH5-203ENST00000375750 DTHD1Q6ZMT9 781 aa16.92■□□□□ 0.3
MSH5-203ENST00000375750 MED4Q9NPJ6 270 aa16.92■□□□□ 0.3
MSH5-203ENST00000375750 MAGEC2Q9UBF1 373 aaPredicted RBP16.92■□□□□ 0.3
MSH5-203ENST00000375750 CAPN6Q9Y6Q1 641 aa16.92■□□□□ 0.3
MSH5-203ENST00000375750 CCNI2Q6ZMN8 369 aaPredicted RBP16.92■□□□□ 0.3
MSH5-203ENST00000375750 MSL3Q8N5Y2 521 aaKnown RBP16.92■□□□□ 0.3
MSH5-203ENST00000375750 ANKRD13CQ8N6S4 541 aa16.92■□□□□ 0.3
MSH5-203ENST00000375750 TTYH3Q9C0H2 523 aa16.92■□□□□ 0.3
MSH5-203ENST00000375750 KCNQ5Q9NR82 932 aa16.92■□□□□ 0.3
MSH5-203ENST00000375750 EXOC1Q9NV70 894 aa16.92■□□□□ 0.3
MSH5-203ENST00000375750 DMGDHQ9UI17 866 aaKnown RBP16.92■□□□□ 0.3
MSH5-203ENST00000375750 MAST2Q6P0Q8 1798 aa16.91■□□□□ 0.3
MSH5-203ENST00000375750 GPR75-ASB3A0A0A6YYF3 556 aa16.91■□□□□ 0.3
MSH5-203ENST00000375750 GOLGA8HP0CJ92 632 aa16.91■□□□□ 0.3
MSH5-203ENST00000375750 UBA7P41226 1012 aa16.91■□□□□ 0.3
MSH5-203ENST00000375750 DNAJC21Q5F1R6 531 aaKnown RBP16.91■□□□□ 0.3
MSH5-203ENST00000375750 C12orf60Q5U649 245 aa16.91■□□□□ 0.3
MSH5-203ENST00000375750 CERS5Q8N5B7 392 aa16.91■□□□□ 0.3
MSH5-203ENST00000375750 TBC1D22AQ8WUA7 517 aa16.91■□□□□ 0.3
MSH5-203ENST00000375750 LRRC1Q9BTT6 524 aa16.91■□□□□ 0.3
MSH5-203ENST00000375750 NCK2O43639 380 aa16.91■□□□□ 0.3
MSH5-203ENST00000375750 RPS6KA5O75582 802 aa16.91■□□□□ 0.3
MSH5-203ENST00000375750 MOCS3O95396 460 aa16.91■□□□□ 0.3
MSH5-203ENST00000375750 MTIF2P46199 727 aaKnown RBP16.91■□□□□ 0.3
MSH5-203ENST00000375750 AARSP49588 968 aaKnown RBP eCLIP16.91■□□□□ 0.32e-6■■■■■ 67
MSH5-203ENST00000375750 KCTD19Q17RG1 926 aaPredicted RBP16.91■□□□□ 0.3
MSH5-203ENST00000375750 GOLGA6L1Q8N7Z2 621 aa16.91■□□□□ 0.3
MSH5-203ENST00000375750 CNOT6LQ96LI5 555 aaKnown RBP16.91■□□□□ 0.3
MSH5-203ENST00000375750 DBNDD1Q9H9R9 158 aa16.91■□□□□ 0.3
MSH5-203ENST00000375750 USP17L3A6NCW0 530 aa16.9■□□□□ 0.3
MSH5-203ENST00000375750 USP17L4A6NCW7 530 aa16.9■□□□□ 0.3
MSH5-203ENST00000375750 G3V3G9 751 aa16.9■□□□□ 0.3
MSH5-203ENST00000375750 KRT86O43790 486 aa16.9■□□□□ 0.3
MSH5-203ENST00000375750 TUBB4BP68371 445 aa16.9■□□□□ 0.3
MSH5-203ENST00000375750 DCAF8Q5TAQ9 597 aa16.9■□□□□ 0.3
MSH5-203ENST00000375750 USP17L1Q7RTZ2 530 aa16.9■□□□□ 0.3
MSH5-203ENST00000375750 HEATR3Q7Z4Q2 680 aa16.9■□□□□ 0.3
MSH5-203ENST00000375750 FBXO41Q8TF61 875 aa16.9■□□□□ 0.3
MSH5-203ENST00000375750 ACBD3Q9H3P7 528 aa16.9■□□□□ 0.3
MSH5-203ENST00000375750 KAT14Q9H8E8 782 aa16.9■□□□□ 0.3
MSH5-203ENST00000375750 PCDHA6Q9UN73 950 aa16.9■□□□□ 0.3
MSH5-203ENST00000375750 PCDHA8Q9Y5H6 950 aa16.9■□□□□ 0.3
MSH5-203ENST00000375750 CCDC194A0A1B0GVG4 234 aa16.9■□□□□ 0.3
MSH5-203ENST00000375750 A0A1W2PQC6 194 aa16.9■□□□□ 0.3
MSH5-203ENST00000375750 PSMA7O14818 248 aa16.9■□□□□ 0.3
MSH5-203ENST00000375750 PLCG1P19174 1290 aa16.9■□□□□ 0.3
MSH5-203ENST00000375750 SF3B2Q13435 895 aaKnown RBP16.9■□□□□ 0.3
MSH5-203ENST00000375750 MEA1Q16626 185 aa16.9■□□□□ 0.3
MSH5-203ENST00000375750 CCDC96Q2M329 555 aa16.9■□□□□ 0.3
MSH5-203ENST00000375750 GIMAP8Q8ND71 665 aaPredicted RBP16.9■□□□□ 0.3
MSH5-203ENST00000375750 CRACR2AQ9BSW2 395 aa16.9■□□□□ 0.3
MSH5-203ENST00000375750 THAP9Q9H5L6 903 aa16.9■□□□□ 0.3
MSH5-203ENST00000375750 IL17RBQ9NRM6 502 aa16.9■□□□□ 0.3
MSH5-203ENST00000375750 ORC4O43929 436 aa16.89■□□□□ 0.3
MSH5-203ENST00000375750 PCP11498 1178 aaKnown RBP16.89■□□□□ 0.3
MSH5-203ENST00000375750 EEF1GP26641 437 aaKnown RBP16.89■□□□□ 0.3
MSH5-203ENST00000375750 NOP2P46087 812 aaKnown RBP16.89■□□□□ 0.3
MSH5-203ENST00000375750 TRAPPC10P48553 1259 aa16.89■□□□□ 0.3
MSH5-203ENST00000375750 DNM2P50570 870 aa16.89■□□□□ 0.3
MSH5-203ENST00000375750 KRT83P78385 493 aa16.89■□□□□ 0.3
MSH5-203ENST00000375750 TFAP4Q01664 338 aa16.89■□□□□ 0.3
MSH5-203ENST00000375750 PDE4DQ08499 809 aa16.89■□□□□ 0.3
MSH5-203ENST00000375750 MIIPQ5JXC2 388 aa16.89■□□□□ 0.3
MSH5-203ENST00000375750 NFRKBQ6P4R8 1299 aa16.89■□□□□ 0.3
MSH5-203ENST00000375750 SND1Q7KZF4 910 aaKnown RBP eCLIP16.89■□□□□ 0.3
MSH5-203ENST00000375750 TEX11Q8IYF3 940 aa16.89■□□□□ 0.3
MSH5-203ENST00000375750 SLC44A5Q8NCS7 719 aa16.89■□□□□ 0.3
MSH5-203ENST00000375750 NOC4LQ9BVI4 516 aaKnown RBP16.89■□□□□ 0.3
MSH5-203ENST00000375750 PCDHA4Q9UN74 947 aa16.89■□□□□ 0.3
MSH5-203ENST00000375750 PPARDQ03181 441 aa16.89■□□□□ 0.29
MSH5-203ENST00000375750 ARL6IP4Q66PJ3 421 aaKnown RBP16.89■□□□□ 0.29
MSH5-203ENST00000375750 FAM207AQ9NSI2 230 aaPredicted RBP16.89■□□□□ 0.29
MSH5-203ENST00000375750 CYTH3O43739 400 aa16.89■□□□□ 0.29
MSH5-203ENST00000375750 CYLC1P35663 651 aaPredicted RBP16.89■□□□□ 0.29
MSH5-203ENST00000375750 DNA2P51530 1060 aa16.89■□□□□ 0.29
MSH5-203ENST00000375750 RHBDL3P58872 404 aa16.89■□□□□ 0.29
MSH5-203ENST00000375750 STYK1Q6J9G0 422 aa16.89■□□□□ 0.29
MSH5-203ENST00000375750 CREG2Q8IUH2 290 aa16.89■□□□□ 0.29
MSH5-203ENST00000375750 SLC39A2Q9NP94 309 aa16.89■□□□□ 0.29
MSH5-203ENST00000375750 RGPD3A6NKT7 1758 aaPredicted RBP16.88■□□□□ 0.29
MSH5-203ENST00000375750 RGPD4Q7Z3J3 1758 aa16.88■□□□□ 0.29
MSH5-203ENST00000375750 RHOBTB3O94955 611 aa16.88■□□□□ 0.29
MSH5-203ENST00000375750 SCNN1DP51172 638 aa16.88■□□□□ 0.29
MSH5-203ENST00000375750 FAM163AQ96GL9 167 aaPredicted RBP16.88■□□□□ 0.29
MSH5-203ENST00000375750 VIPAS39Q9H9C1 493 aa16.88■□□□□ 0.29
MSH5-203ENST00000375750 KBTBD4Q9NVX7 518 aa16.88■□□□□ 0.29
MSH5-203ENST00000375750 ZNHIT6Q9NWK9 470 aaKnown RBP16.88■□□□□ 0.29
MSH5-203ENST00000375750 SALL4Q9UJQ4 1053 aa16.88■□□□□ 0.29
MSH5-203ENST00000375750 DAGLAQ9Y4D2 1042 aa16.88■□□□□ 0.29
MSH5-203ENST00000375750 MYH10P35580 1976 aa16.88■□□□□ 0.29
MSH5-203ENST00000375750 BAG6P46379 1132 aa16.88■□□□□ 0.29
MSH5-203ENST00000375750 ASIC1P78348 528 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms