RNA–Protein interactions for RNA: ENST00000375238.8

NECAB3-202, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECAB3, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-202ENST00000375238 PAXBP1Q9Y5B6 917 aa21.84■■□□□ 1.09
NECAB3-202ENST00000375238 MYH7BA7E2Y1 1941 aa21.84■■□□□ 1.09
NECAB3-202ENST00000375238 USP14P54578 494 aa21.84■■□□□ 1.09
NECAB3-202ENST00000375238 CEP135Q66GS9 1140 aa21.84■■□□□ 1.09
NECAB3-202ENST00000375238 E4F1Q66K89 784 aaPredicted RBP21.84■■□□□ 1.09
NECAB3-202ENST00000375238 WDR18Q9BV38 432 aa21.84■■□□□ 1.09
NECAB3-202ENST00000375238 ZC3H4Q9UPT8 1303 aaKnown RBP21.84■■□□□ 1.09
NECAB3-202ENST00000375238 SRCAPQ6ZRS2 3230 aa21.83■■□□□ 1.09
NECAB3-202ENST00000375238 SMCHD1A6NHR9 2005 aa21.83■■□□□ 1.09
NECAB3-202ENST00000375238 EPHX2P34913 555 aa21.83■■□□□ 1.09
NECAB3-202ENST00000375238 KCNJ6P48051 423 aa21.83■■□□□ 1.09
NECAB3-202ENST00000375238 ORC2Q13416 577 aaPredicted RBP21.83■■□□□ 1.09
NECAB3-202ENST00000375238 DTHD1Q6ZMT9 781 aa21.83■■□□□ 1.09
NECAB3-202ENST00000375238 USP50Q70EL3 339 aaPredicted RBP21.83■■□□□ 1.09
NECAB3-202ENST00000375238 KRT26Q7Z3Y9 468 aa21.83■■□□□ 1.09
NECAB3-202ENST00000375238 TANGO6Q9C0B7 1094 aa21.83■■□□□ 1.09
NECAB3-202ENST00000375238 TRMT1Q9NXH9 659 aaKnown RBP21.83■■□□□ 1.09
NECAB3-202ENST00000375238 LONP1P36776 959 aaKnown RBP21.82■■□□□ 1.08
NECAB3-202ENST00000375238 PTPN14Q15678 1187 aa21.82■■□□□ 1.08
NECAB3-202ENST00000375238 ZNF280CQ8ND82 737 aa21.82■■□□□ 1.08
NECAB3-202ENST00000375238 SLF1Q9BQI6 1058 aa21.82■■□□□ 1.08
NECAB3-202ENST00000375238 EMILIN3Q9NT22 766 aa21.82■■□□□ 1.08
NECAB3-202ENST00000375238 NFE2L3Q9Y4A8 694 aa21.82■■□□□ 1.08
NECAB3-202ENST00000375238 ZHX2Q9Y6X8 837 aa21.82■■□□□ 1.08
NECAB3-202ENST00000375238 PHIPQ8WWQ0 1821 aa21.82■■□□□ 1.08
NECAB3-202ENST00000375238 GLTPD2A6NH11 291 aa21.82■■□□□ 1.08
NECAB3-202ENST00000375238 MEIS2O14770 477 aa21.82■■□□□ 1.08
NECAB3-202ENST00000375238 OR52Z1P0C646 297 aa21.82■■□□□ 1.08
NECAB3-202ENST00000375238 VCAM1P19320 739 aa21.82■■□□□ 1.08
NECAB3-202ENST00000375238 PRPHP41219 470 aa21.82■■□□□ 1.08
NECAB3-202ENST00000375238 AFMP43652 599 aa21.82■■□□□ 1.08
NECAB3-202ENST00000375238 BACE1P56817 501 aa21.82■■□□□ 1.08
NECAB3-202ENST00000375238 DPYDQ12882 1025 aa21.82■■□□□ 1.08
NECAB3-202ENST00000375238 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.82■■□□□ 1.083e-11■■■□□ 16.1
NECAB3-202ENST00000375238 USP2O75604 605 aaPredicted RBP21.81■■□□□ 1.08
NECAB3-202ENST00000375238 ERCC5P28715 1186 aaPredicted RBP21.81■■□□□ 1.08
NECAB3-202ENST00000375238 AP3B2Q13367 1082 aa21.81■■□□□ 1.08
NECAB3-202ENST00000375238 E2F4Q16254 413 aa21.81■■□□□ 1.08
NECAB3-202ENST00000375238 NOL9Q5SY16 702 aaKnown RBP21.81■■□□□ 1.08
NECAB3-202ENST00000375238 MTERF4Q7Z6M4 381 aaKnown RBP21.81■■□□□ 1.08
NECAB3-202ENST00000375238 TRMT44Q8IYL2 757 aaKnown RBP21.81■■□□□ 1.08
NECAB3-202ENST00000375238 ANO3Q9BYT9 981 aa21.81■■□□□ 1.08
NECAB3-202ENST00000375238 TDP2O95551 362 aa21.8■■□□□ 1.08
NECAB3-202ENST00000375238 CT47A1Q5JQC4 288 aaPredicted RBP21.8■■□□□ 1.08
NECAB3-202ENST00000375238 PRPF38AQ8NAV1 312 aaKnown RBP21.8■■□□□ 1.08
NECAB3-202ENST00000375238 CCDC34Q96HJ3 373 aa21.8■■□□□ 1.08
NECAB3-202ENST00000375238 TMX1Q9H3N1 280 aa21.8■■□□□ 1.08
NECAB3-202ENST00000375238 OPLAHO14841 1288 aa21.8■■□□□ 1.08
NECAB3-202ENST00000375238 CASP1P29466 404 aa21.8■■□□□ 1.08
NECAB3-202ENST00000375238 MCTP2Q6DN12 878 aa21.8■■□□□ 1.08
NECAB3-202ENST00000375238 POTEDQ86YR6 584 aa21.8■■□□□ 1.08
NECAB3-202ENST00000375238 RPAP3Q9H6T3 665 aaPredicted RBP21.8■■□□□ 1.08
NECAB3-202ENST00000375238 SCN4AP35499 1836 aa21.79■■□□□ 1.08
NECAB3-202ENST00000375238 EDIL3O43854 480 aa21.79■■□□□ 1.08
NECAB3-202ENST00000375238 FLOT1O75955 427 aa21.79■■□□□ 1.08
NECAB3-202ENST00000375238 HSP90AA4PQ58FG1 418 aa21.79■■□□□ 1.08
NECAB3-202ENST00000375238 GSDMAQ96QA5 445 aa21.79■■□□□ 1.08
NECAB3-202ENST00000375238 SPDYE3A6NKU9 549 aa21.78■■□□□ 1.08
NECAB3-202ENST00000375238 SLC37A4O43826 429 aa21.78■■□□□ 1.08
NECAB3-202ENST00000375238 PPP1R12BO60237 982 aaPredicted RBP21.78■■□□□ 1.08
NECAB3-202ENST00000375238 CD44P16070 742 aaKnown RBP21.78■■□□□ 1.08
NECAB3-202ENST00000375238 TXLNAP40222 546 aa21.78■■□□□ 1.08
NECAB3-202ENST00000375238 TBX2Q13207 712 aaPredicted RBP21.78■■□□□ 1.08
NECAB3-202ENST00000375238 CUL4BQ13620 913 aa21.78■■□□□ 1.08
NECAB3-202ENST00000375238 CALCRLQ16602 461 aa21.78■■□□□ 1.08
NECAB3-202ENST00000375238 PTPN21Q16825 1174 aa21.78■■□□□ 1.08
NECAB3-202ENST00000375238 LDHDQ86WU2 507 aa21.78■■□□□ 1.08
NECAB3-202ENST00000375238 ZC3H15Q8WU90 426 aaKnown RBP21.78■■□□□ 1.08
NECAB3-202ENST00000375238 SAMSN1Q9NSI8 373 aaKnown RBP21.78■■□□□ 1.08
NECAB3-202ENST00000375238 OTOFQ9HC10 1997 aa21.78■■□□□ 1.08
NECAB3-202ENST00000375238 ABCB11O95342 1321 aa21.78■■□□□ 1.08
NECAB3-202ENST00000375238 FOSP01100 380 aaPredicted RBP21.78■■□□□ 1.08
NECAB3-202ENST00000375238 HOXA13P31271 388 aaPredicted RBP21.78■■□□□ 1.08
NECAB3-202ENST00000375238 HMGCS2P54868 508 aa21.78■■□□□ 1.08
NECAB3-202ENST00000375238 MAP3K9P80192 1104 aa21.78■■□□□ 1.08
NECAB3-202ENST00000375238 EAPPQ56P03 285 aaPredicted RBP21.78■■□□□ 1.08
NECAB3-202ENST00000375238 PPP4R3AQ6IN85 833 aa21.78■■□□□ 1.08
NECAB3-202ENST00000375238 PDXDC2PQ6P474 469 aa21.78■■□□□ 1.08
NECAB3-202ENST00000375238 PPP1R13BQ96KQ4 1090 aa21.78■■□□□ 1.08
NECAB3-202ENST00000375238 NAP1L4Q99733 375 aaKnown RBP21.78■■□□□ 1.08
NECAB3-202ENST00000375238 MRPL11Q9Y3B7 192 aaKnown RBP21.78■■□□□ 1.08
NECAB3-202ENST00000375238 C19orf81C9J6K1 198 aa21.77■■□□□ 1.08
NECAB3-202ENST00000375238 GCFC2P16383 781 aaKnown RBP21.77■■□□□ 1.08
NECAB3-202ENST00000375238 CDC25AP30304 524 aa21.77■■□□□ 1.08
NECAB3-202ENST00000375238 VGLL4Q14135 290 aa21.77■■□□□ 1.08
NECAB3-202ENST00000375238 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.77■■□□□ 1.08
NECAB3-202ENST00000375238 IQUBQ8NA54 791 aa21.77■■□□□ 1.08
NECAB3-202ENST00000375238 CCDC112Q8NEF3 446 aa21.77■■□□□ 1.08
NECAB3-202ENST00000375238 ZNF592Q92610 1267 aa21.77■■□□□ 1.08
NECAB3-202ENST00000375238 DDX25Q9UHL0 483 aaKnown RBP21.77■■□□□ 1.08
NECAB3-202ENST00000375238 CCPG1Q9ULG6 757 aa21.77■■□□□ 1.08
NECAB3-202ENST00000375238 IQCA1LA6NCM1 817 aa21.76■■□□□ 1.07
NECAB3-202ENST00000375238 CFBP00751 764 aa21.76■■□□□ 1.07
NECAB3-202ENST00000375238 ICAM1P05362 532 aa21.76■■□□□ 1.07
NECAB3-202ENST00000375238 ANKRD7Q92527 254 aa21.76■■□□□ 1.07
NECAB3-202ENST00000375238 CDCA5Q96FF9 252 aa21.76■■□□□ 1.07
NECAB3-202ENST00000375238 P2RX7Q99572 595 aaKnown RBP21.76■■□□□ 1.07
NECAB3-202ENST00000375238 TAF1DQ9H5J8 278 aaPredicted RBP21.76■■□□□ 1.07
NECAB3-202ENST00000375238 PPP1R9AQ9ULJ8 1098 aa21.76■■□□□ 1.07
NECAB3-202ENST00000375238 SNCAIPQ9Y6H5 919 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms