RNA–Protein interactions for RNA: ENST00000375025.10

CCDC7-204, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 2,729 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-204ENST00000375025 HOMER2Q9NSB8 354 aa2.84□□□□□ -1.96
CCDC7-204ENST00000375025 PARP2Q9UGN5 583 aa2.84□□□□□ -1.96
CCDC7-204ENST00000375025 DDX41Q9UJV9 622 aaKnown RBP2.84□□□□□ -1.96
CCDC7-204ENST00000375025 CCNL1Q9UK58 526 aaPredicted RBP2.84□□□□□ -1.96
CCDC7-204ENST00000375025 TTF2Q9UNY4 1162 aaKnown RBP2.84□□□□□ -1.96
CCDC7-204ENST00000375025 MRC1P22897 1456 aa2.84□□□□□ -1.96
CCDC7-204ENST00000375025 RPTORQ8N122 1335 aa2.83□□□□□ -1.96
CCDC7-204ENST00000375025 CCDC163A0A0D9SF12 145 aa2.83□□□□□ -1.96
CCDC7-204ENST00000375025 BICDL2A1A5D9 508 aa2.83□□□□□ -1.96
CCDC7-204ENST00000375025 LDHAP00338 332 aaKnown RBP2.83□□□□□ -1.96
CCDC7-204ENST00000375025 MYL1P05976 194 aa2.83□□□□□ -1.96
CCDC7-204ENST00000375025 CTSBP07858 339 aa2.83□□□□□ -1.96
CCDC7-204ENST00000375025 RNASE1P07998 156 aaKnown RBP2.83□□□□□ -1.96
CCDC7-204ENST00000375025 HSP90AB1P08238 724 aaKnown RBP2.83□□□□□ -1.96
CCDC7-204ENST00000375025 DRD2P14416 443 aa2.83□□□□□ -1.96
CCDC7-204ENST00000375025 MAP3K12Q12852 859 aa2.83□□□□□ -1.96
CCDC7-204ENST00000375025 RAPGEF1Q13905 1077 aa2.83□□□□□ -1.96
CCDC7-204ENST00000375025 BRD3Q15059 726 aa2.83□□□□□ -1.96
CCDC7-204ENST00000375025 PEAR1Q5VY43 1037 aaPredicted RBP2.83□□□□□ -1.96
CCDC7-204ENST00000375025 ZNF765Q7L2R6 523 aa2.83□□□□□ -1.96
CCDC7-204ENST00000375025 SAPCD2Q86UD0 394 aa2.83□□□□□ -1.96
CCDC7-204ENST00000375025 ARHGEF25Q86VW2 580 aa2.83□□□□□ -1.96
CCDC7-204ENST00000375025 SLC7A3Q8WY07 619 aa2.83□□□□□ -1.96
CCDC7-204ENST00000375025 RNPC3Q96LT9 517 aaKnown RBP2.83□□□□□ -1.96
CCDC7-204ENST00000375025 ZFYVE1Q9HBF4 777 aa2.83□□□□□ -1.96
CCDC7-204ENST00000375025 RRP7BPQ9NSQ0 103 aa2.83□□□□□ -1.96
CCDC7-204ENST00000375025 COL5A3P25940 1745 aaPredicted RBP2.83□□□□□ -1.96
CCDC7-204ENST00000375025 TREHO43280 583 aa2.83□□□□□ -1.96
CCDC7-204ENST00000375025 CDC45O75419 566 aa2.83□□□□□ -1.96
CCDC7-204ENST00000375025 FOSP01100 380 aaPredicted RBP2.83□□□□□ -1.96
CCDC7-204ENST00000375025 LDHBP07195 334 aaKnown RBP2.83□□□□□ -1.96
CCDC7-204ENST00000375025 EDN3P14138 238 aa2.83□□□□□ -1.96
CCDC7-204ENST00000375025 CASP2P42575 452 aa2.83□□□□□ -1.96
CCDC7-204ENST00000375025 ARHGAP4P98171 946 aa2.83□□□□□ -1.96
CCDC7-204ENST00000375025 EXOSC10Q01780 885 aaKnown RBP2.83□□□□□ -1.96
CCDC7-204ENST00000375025 PRKCQQ04759 706 aa2.83□□□□□ -1.96
CCDC7-204ENST00000375025 PTPN12Q05209 780 aaKnown RBP2.83□□□□□ -1.96
CCDC7-204ENST00000375025 ZNF211Q13398 564 aaPredicted RBP2.83□□□□□ -1.96
CCDC7-204ENST00000375025 MAP9Q49MG5 647 aa2.83□□□□□ -1.96
CCDC7-204ENST00000375025 CNTROBQ8N137 903 aa2.83□□□□□ -1.96
CCDC7-204ENST00000375025 FAM168AQ92567 244 aa2.83□□□□□ -1.96
CCDC7-204ENST00000375025 APPBP2Q92624 585 aa2.83□□□□□ -1.96
CCDC7-204ENST00000375025 FAM84AQ96KN4 292 aa2.83□□□□□ -1.96
CCDC7-204ENST00000375025 DMRTB1Q96MA1 342 aa2.83□□□□□ -1.96
CCDC7-204ENST00000375025 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.83□□□□□ -1.96
CCDC7-204ENST00000375025 ZHX3Q9H4I2 956 aa2.83□□□□□ -1.96
CCDC7-204ENST00000375025 MAP3K20Q9NYL2 800 aaKnown RBP2.83□□□□□ -1.96
CCDC7-204ENST00000375025 NRBP1Q9UHY1 535 aa2.83□□□□□ -1.96
CCDC7-204ENST00000375025 FRMD4BQ9Y2L6 1034 aa2.83□□□□□ -1.96
CCDC7-204ENST00000375025 USP31Q70CQ4 1352 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 COL3A1P02461 1466 aaPredicted RBP2.82□□□□□ -1.96
CCDC7-204ENST00000375025 FAM155AB1AL88 458 aaPredicted RBP2.82□□□□□ -1.96
CCDC7-204ENST00000375025 NDUFB5O43674 189 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 IL2RBP14784 551 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 EPHB1P54762 984 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 LMOD3Q0VAK6 560 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 ZNF124Q15973 351 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 ECM1Q16610 540 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 TBC1D10BQ4KMP7 808 aaPredicted RBP2.82□□□□□ -1.96
CCDC7-204ENST00000375025 ZNF574Q6ZN55 896 aaPredicted RBP2.82□□□□□ -1.96
CCDC7-204ENST00000375025 KRT26Q7Z3Y9 468 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 UBE2Q1Q7Z7E8 422 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 HOMER1Q86YM7 354 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 PAF1Q8N7H5 531 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 HELQQ8TDG4 1101 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 IPO4Q8TEX9 1081 aaKnown RBP2.82□□□□□ -1.96
CCDC7-204ENST00000375025 EDEM1Q92611 657 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 SECISBP2LQ93073 1101 aaKnown RBP2.82□□□□□ -1.96
CCDC7-204ENST00000375025 USP26Q9BXU7 913 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 TNKS2Q9H2K2 1166 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 C14orf93Q9H972 538 aaKnown RBP2.82□□□□□ -1.96
CCDC7-204ENST00000375025 KIF7Q2M1P5 1343 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 TTC21AQ8NDW8 1320 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 CDHR2Q9BYE9 1310 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 CASP8AP2Q9UKL3 1982 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 TTC36A6NLP5 189 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.82□□□□□ -1.96
CCDC7-204ENST00000375025 TRPA1O75762 1119 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 FAM13AO94988 1023 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 NFICP08651 508 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 GJA8P48165 433 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 TNNI2P48788 182 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 FAM193AP78312 1265 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 PLCB3Q01970 1234 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 TMEM95Q3KNT9 176 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 USP50Q70EL3 339 aaPredicted RBP2.82□□□□□ -1.96
CCDC7-204ENST00000375025 KCNH5Q8NCM2 988 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 SLC39A13Q96H72 371 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 TRIM56Q9BRZ2 755 aaKnown RBP2.82□□□□□ -1.96
CCDC7-204ENST00000375025 IER2Q9BTL4 223 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 TMX4Q9H1E5 349 aaPredicted RBP2.82□□□□□ -1.96
CCDC7-204ENST00000375025 FAM105AQ9NUU6 356 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 HACL1Q9UJ83 578 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 ADAMTS6Q9UKP5 1117 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 USP47Q96K76 1375 aa2.82□□□□□ -1.96
CCDC7-204ENST00000375025 NCANO14594 1321 aa2.81□□□□□ -1.96
CCDC7-204ENST00000375025 ZNF609O15014 1411 aa2.81□□□□□ -1.96
CCDC7-204ENST00000375025 A0A0G2JLW4 131 aa2.81□□□□□ -1.96
CCDC7-204ENST00000375025 TSPAN15O95858 294 aa2.81□□□□□ -1.96
CCDC7-204ENST00000375025 CD8BP10966 210 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms