RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 RASGRF1Q13972 1273 aa11.65□□□□□ -0.54
PGK1-201ENST00000373316 CC2D2BQ6DHV5 1058 aa11.65□□□□□ -0.54
PGK1-201ENST00000373316 DEFB132Q7Z7B7 95 aa11.65□□□□□ -0.54
PGK1-201ENST00000373316 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.65□□□□□ -0.54
PGK1-201ENST00000373316 NARFQ9UHQ1 456 aa11.65□□□□□ -0.54
PGK1-201ENST00000373316 PABPN1LA6NDY0 278 aaKnown RBP11.65□□□□□ -0.54
PGK1-201ENST00000373316 EVX2Q03828 476 aa11.65□□□□□ -0.54
PGK1-201ENST00000373316 RNASELQ05823 741 aaKnown RBP11.65□□□□□ -0.54
PGK1-201ENST00000373316 VGLL2Q8N8G2 317 aa11.65□□□□□ -0.54
PGK1-201ENST00000373316 P2RX5Q93086 422 aa11.65□□□□□ -0.54
PGK1-201ENST00000373316 RAB3IPQ96QF0 476 aaPredicted RBP11.65□□□□□ -0.54
PGK1-201ENST00000373316 DHX36Q9H2U1 1008 aaKnown RBP11.65□□□□□ -0.54
PGK1-201ENST00000373316 VPS54Q9P1Q0 977 aa11.65□□□□□ -0.54
PGK1-201ENST00000373316 BBOX1O75936 387 aa11.65□□□□□ -0.54
PGK1-201ENST00000373316 PHBP35232 272 aa11.65□□□□□ -0.54
PGK1-201ENST00000373316 CACNA2D3Q8IZS8 1091 aa11.65□□□□□ -0.54
PGK1-201ENST00000373316 CNOT10Q9H9A5 744 aaKnown RBP11.65□□□□□ -0.54
PGK1-201ENST00000373316 CCDC169A6NNP5 214 aa11.65□□□□□ -0.55
PGK1-201ENST00000373316 MAP7Q14244 749 aa11.65□□□□□ -0.55
PGK1-201ENST00000373316 DENND2CQ68D51 928 aa11.65□□□□□ -0.55
PGK1-201ENST00000373316 DPP8Q6V1X1 898 aaPredicted RBP11.65□□□□□ -0.55
PGK1-201ENST00000373316 TXNDC16Q9P2K2 825 aa11.65□□□□□ -0.55
PGK1-201ENST00000373316 KCNJ14Q9UNX9 436 aa11.65□□□□□ -0.55
PGK1-201ENST00000373316 ATRNO75882 1429 aa11.64□□□□□ -0.55
PGK1-201ENST00000373316 INF2Q27J81 1249 aa11.64□□□□□ -0.55
PGK1-201ENST00000373316 LMNTD2Q8IXW0 634 aa11.64□□□□□ -0.55
PGK1-201ENST00000373316 WDR11Q9BZH6 1224 aa11.64□□□□□ -0.55
PGK1-201ENST00000373316 FANCLQ9NW38 375 aa11.64□□□□□ -0.55
PGK1-201ENST00000373316 CCNE1P24864 410 aa11.64□□□□□ -0.55
PGK1-201ENST00000373316 POLD1P28340 1107 aa11.64□□□□□ -0.55
PGK1-201ENST00000373316 SYMPKQ92797 1274 aaKnown RBP11.64□□□□□ -0.55
PGK1-201ENST00000373316 SLF1Q9BQI6 1058 aa11.64□□□□□ -0.55
PGK1-201ENST00000373316 CLIC4Q9Y696 253 aa11.64□□□□□ -0.55
PGK1-201ENST00000373316 USP17L12C9JPN9 530 aa11.64□□□□□ -0.55
PGK1-201ENST00000373316 USP17L21D6R901 530 aa11.64□□□□□ -0.55
PGK1-201ENST00000373316 PRKAB2O43741 272 aa11.64□□□□□ -0.55
PGK1-201ENST00000373316 EIF3BP55884 814 aaKnown RBP11.64□□□□□ -0.55
PGK1-201ENST00000373316 ZBTB16Q05516 673 aa11.64□□□□□ -0.55
PGK1-201ENST00000373316 FAM26FQ5R3K3 315 aa11.64□□□□□ -0.55
PGK1-201ENST00000373316 MAP3K21Q5TCX8 1036 aa11.64□□□□□ -0.55
PGK1-201ENST00000373316 FAM173BQ6P4H8 233 aa11.64□□□□□ -0.55
PGK1-201ENST00000373316 CEP63Q96MT8 703 aa11.64□□□□□ -0.55
PGK1-201ENST00000373316 PANK4Q9NVE7 773 aa11.64□□□□□ -0.55
PGK1-201ENST00000373316 RNF40O75150 1001 aa11.64□□□□□ -0.55
PGK1-201ENST00000373316 H2AFZP0C0S5 128 aa11.64□□□□□ -0.55
PGK1-201ENST00000373316 GNPTABQ3T906 1256 aa11.64□□□□□ -0.55
PGK1-201ENST00000373316 H2AFVQ71UI9 128 aa11.64□□□□□ -0.55
PGK1-201ENST00000373316 PLA2G4DQ86XP0 818 aa11.64□□□□□ -0.55
PGK1-201ENST00000373316 WHAMMQ8TF30 809 aa11.64□□□□□ -0.55
PGK1-201ENST00000373316 JPH2Q9BR39 696 aaPredicted RBP11.64□□□□□ -0.55
PGK1-201ENST00000373316 PSTPIP2Q9H939 334 aa11.64□□□□□ -0.55
PGK1-201ENST00000373316 MRPL44Q9H9J2 332 aaKnown RBP11.64□□□□□ -0.55
PGK1-201ENST00000373316 GPCPD1Q9NPB8 672 aa11.64□□□□□ -0.55
PGK1-201ENST00000373316 CTTNBP2NLQ9P2B4 639 aa11.64□□□□□ -0.55
PGK1-201ENST00000373316 JRKLQ9Y4A0 524 aa11.64□□□□□ -0.55
PGK1-201ENST00000373316 PCDHA5Q9Y5H7 936 aa11.64□□□□□ -0.55
PGK1-201ENST00000373316 SPEF2Q9C093 1822 aa11.64□□□□□ -0.55
PGK1-201ENST00000373316 TUBGCP6Q96RT7 1819 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 EXOC3O60645 756 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 SLC8A1P32418 973 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 AP3B2Q13367 1082 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 CCDC38Q502W7 563 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 HSP90AA4PQ58FG1 418 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 NCAPH2Q6IBW4 605 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 STOX1Q6ZVD7 989 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 TEKT3Q9BXF9 490 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 LARSQ9P2J5 1176 aaKnown RBP11.63□□□□□ -0.55
PGK1-201ENST00000373316 PCDHA12Q9UN75 941 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 SSX2IPQ9Y2D8 614 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 ZNF804BA4D1E1 1349 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 KLRF2D3W0D1 207 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 HAUS1Q96CS2 278 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 LSM14BQ9BX40 385 aaKnown RBP11.63□□□□□ -0.55
PGK1-201ENST00000373316 TMEM206Q9H813 350 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.63□□□□□ -0.554e-7■□□□□ 9.9
PGK1-201ENST00000373316 ANAPC4Q9UJX5 808 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 PNPLA7Q6ZV29 1317 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 BRWD3Q6RI45 1802 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 CEP104O60308 925 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 EVI5O60447 810 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 GYS1P13807 737 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 CNGA1P29973 690 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 KIF11P52732 1056 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 RRAGAQ7L523 313 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 MYCT1Q8N699 235 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 TUBB6Q9BUF5 446 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 BSDC1Q9NW68 430 aaPredicted RBP11.63□□□□□ -0.55
PGK1-201ENST00000373316 MAN1B1Q9UKM7 699 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 H0YIN7 160 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 U2AF2P26368 475 aaKnown RBP eCLIP11.63□□□□□ -0.555e-50■■■■■ 94.5
PGK1-201ENST00000373316 RXRBP28702 533 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 TSNAXIP1Q2TAA8 658 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 SGMS1Q86VZ5 419 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 GPBP1Q86WP2 473 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 TEX2Q8IWB9 1127 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 PICK1Q9NRD5 415 aa11.63□□□□□ -0.55
PGK1-201ENST00000373316 ZHX1Q9UKY1 873 aaPredicted RBP11.63□□□□□ -0.55
PGK1-201ENST00000373316 POLR2MP0CAP2 368 aa11.62□□□□□ -0.55
PGK1-201ENST00000373316 RFX1P22670 979 aa11.62□□□□□ -0.55
PGK1-201ENST00000373316 PTPREP23469 700 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms