RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 GUCY2DQ02846 1103 aa15.18■□□□□ 0.02
USP49-201ENST00000373006 ALS2CLQ60I27 953 aa15.18■□□□□ 0.02
USP49-201ENST00000373006 HEATR3Q7Z4Q2 680 aa15.18■□□□□ 0.02
USP49-201ENST00000373006 OTUD6BQ8N6M0 293 aa15.18■□□□□ 0.02
USP49-201ENST00000373006 GIMAP7Q8NHV1 300 aa15.18■□□□□ 0.02
USP49-201ENST00000373006 ERGIC2Q96RQ1 377 aa15.18■□□□□ 0.02
USP49-201ENST00000373006 TLR10Q9BXR5 811 aa15.18■□□□□ 0.02
USP49-201ENST00000373006 PCDHA6Q9UN73 950 aa15.18■□□□□ 0.02
USP49-201ENST00000373006 PCDHA8Q9Y5H6 950 aa15.18■□□□□ 0.02
USP49-201ENST00000373006 BICDL2A1A5D9 508 aa15.18■□□□□ 0.02
USP49-201ENST00000373006 CABP7Q86V35 215 aa15.18■□□□□ 0.02
USP49-201ENST00000373006 ACSBG1Q96GR2 724 aa15.18■□□□□ 0.02
USP49-201ENST00000373006 BRIP1Q9BX63 1249 aa15.18■□□□□ 0.02
USP49-201ENST00000373006 SEMA6BQ9H3T3 888 aa15.18■□□□□ 0.02
USP49-201ENST00000373006 BAZ2AQ9UIF9 1905 aaKnown RBP15.17■□□□□ 0.02
USP49-201ENST00000373006 MYH13Q9UKX3 1938 aa15.17■□□□□ 0.02
USP49-201ENST00000373006 ZNF233A6NK53 670 aa15.17■□□□□ 0.02
USP49-201ENST00000373006 KIAA0754O94854 1291 aa15.17■□□□□ 0.02
USP49-201ENST00000373006 CFAP58Q5T655 872 aa15.17■□□□□ 0.02
USP49-201ENST00000373006 FAM114A1Q8IWE2 563 aa15.17■□□□□ 0.02
USP49-201ENST00000373006 NDST4Q9H3R1 872 aa15.17■□□□□ 0.02
USP49-201ENST00000373006 ZSCAN29Q8IWY8 852 aaPredicted RBP15.17■□□□□ 0.02
USP49-201ENST00000373006 CPVLQ9H3G5 476 aa15.17■□□□□ 0.02
USP49-201ENST00000373006 PACSIN2Q9UNF0 486 aaPredicted RBP15.17■□□□□ 0.02
USP49-201ENST00000373006 TULP1O00294 542 aaPredicted RBP15.16■□□□□ 0.02
USP49-201ENST00000373006 EPB41P11171 864 aaKnown RBP15.16■□□□□ 0.02
USP49-201ENST00000373006 PRLRP16471 622 aa15.16■□□□□ 0.02
USP49-201ENST00000373006 TECP42680 631 aa15.16■□□□□ 0.02
USP49-201ENST00000373006 SLC1A4P43007 532 aa15.16■□□□□ 0.02
USP49-201ENST00000373006 SKOR1P84550 965 aa15.16■□□□□ 0.02
USP49-201ENST00000373006 CDK17Q00537 523 aa15.16■□□□□ 0.02
USP49-201ENST00000373006 LETM2Q2VYF4 491 aa15.16■□□□□ 0.02
USP49-201ENST00000373006 CCDC152Q4G0S7 254 aa15.16■□□□□ 0.02
USP49-201ENST00000373006 RNF187Q5TA31 235 aaPredicted RBP15.16■□□□□ 0.02
USP49-201ENST00000373006 RCSD1Q6JBY9 416 aa15.16■□□□□ 0.02
USP49-201ENST00000373006 POTEDQ86YR6 584 aa15.16■□□□□ 0.02
USP49-201ENST00000373006 KIAA0895Q8NCT3 520 aa15.16■□□□□ 0.02
USP49-201ENST00000373006 CCSER1Q9C0I3 900 aa15.16■□□□□ 0.02
USP49-201ENST00000373006 TCP11L1Q9NUJ3 509 aa15.16■□□□□ 0.02
USP49-201ENST00000373006 A0A1W2PQJ5 194 aa15.16■□□□□ 0.02
USP49-201ENST00000373006 HEXIM1O94992 359 aaKnown RBP15.16■□□□□ 0.02
USP49-201ENST00000373006 SF3A3Q12874 501 aaKnown RBP eCLIP15.16■□□□□ 0.02
USP49-201ENST00000373006 ENOX2Q16206 610 aaKnown RBP15.16■□□□□ 0.02
USP49-201ENST00000373006 VWA3BQ502W6 1294 aa15.16■□□□□ 0.02
USP49-201ENST00000373006 KLHDC7AQ5VTJ3 777 aa15.16■□□□□ 0.02
USP49-201ENST00000373006 CEP57Q86XR8 500 aa15.16■□□□□ 0.02
USP49-201ENST00000373006 CEP89Q96ST8 783 aa15.16■□□□□ 0.02
USP49-201ENST00000373006 NLRC4Q9NPP4 1024 aa15.16■□□□□ 0.02
USP49-201ENST00000373006 FTCDO95954 541 aa15.16■□□□□ 0.02
USP49-201ENST00000373006 FGRP09769 529 aa15.16■□□□□ 0.02
USP49-201ENST00000373006 LSP1P33241 339 aa15.16■□□□□ 0.02
USP49-201ENST00000373006 SETQ01105 290 aaPredicted RBP15.16■□□□□ 0.02
USP49-201ENST00000373006 ITIH3Q06033 890 aa15.16■□□□□ 0.02
USP49-201ENST00000373006 TDRD12Q587J7 1177 aaKnown RBP15.16■□□□□ 0.02
USP49-201ENST00000373006 BICDL1Q6ZP65 573 aa15.16■□□□□ 0.02
USP49-201ENST00000373006 DYMQ7RTS9 669 aa15.16■□□□□ 0.02
USP49-201ENST00000373006 CCDC47Q96A33 483 aaKnown RBP15.16■□□□□ 0.02
USP49-201ENST00000373006 DCP1AQ9NPI6 582 aaPredicted RBP15.16■□□□□ 0.02
USP49-201ENST00000373006 SIK3Q9Y2K2 1263 aa15.16■□□□□ 0.02
USP49-201ENST00000373006 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.16■□□□□ 0.02
USP49-201ENST00000373006 BCORQ6W2J9 1755 aa15.15■□□□□ 0.02
USP49-201ENST00000373006 CCNT1O60563 726 aaKnown RBP15.15■□□□□ 0.02
USP49-201ENST00000373006 KIF5BP33176 963 aa15.15■□□□□ 0.02
USP49-201ENST00000373006 SWT1Q5T5J6 900 aaKnown RBP15.15■□□□□ 0.02
USP49-201ENST00000373006 B4GALNT4Q76KP1 1039 aa15.15■□□□□ 0.02
USP49-201ENST00000373006 ZNF572Q7Z3I7 529 aaPredicted RBP15.15■□□□□ 0.02
USP49-201ENST00000373006 CAVIN3Q969G5 261 aa15.15■□□□□ 0.02
USP49-201ENST00000373006 ERVV-1B6SEH8 477 aa15.15■□□□□ 0.02
USP49-201ENST00000373006 GOLGA8HP0CJ92 632 aa15.15■□□□□ 0.02
USP49-201ENST00000373006 HPDP32754 393 aaPredicted RBP15.15■□□□□ 0.02
USP49-201ENST00000373006 FIGNQ5HY92 759 aa15.15■□□□□ 0.02
USP49-201ENST00000373006 CACNA2D4Q7Z3S7 1137 aa15.15■□□□□ 0.02
USP49-201ENST00000373006 IFT20Q8IY31 132 aa15.15■□□□□ 0.02
USP49-201ENST00000373006 IQCKQ8N0W5 287 aa15.15■□□□□ 0.02
USP49-201ENST00000373006 KRT12Q99456 494 aa15.15■□□□□ 0.02
USP49-201ENST00000373006 TANGO6Q9C0B7 1094 aa15.15■□□□□ 0.02
USP49-201ENST00000373006 CD248Q9HCU0 757 aa15.15■□□□□ 0.02
USP49-201ENST00000373006 NIP7Q9Y221 180 aaKnown RBP eCLIP15.15■□□□□ 0.02
USP49-201ENST00000373006 DUOX1Q9NRD9 1551 aa15.15■□□□□ 0.02
USP49-201ENST00000373006 MYH3P11055 1940 aa15.14■□□□□ 0.01
USP49-201ENST00000373006 DOCK2Q92608 1830 aa15.14■□□□□ 0.01
USP49-201ENST00000373006 MEFVO15553 781 aaPredicted RBP15.14■□□□□ 0.01
USP49-201ENST00000373006 ATP2C2O75185 946 aa15.14■□□□□ 0.01
USP49-201ENST00000373006 MYL1P05976 194 aa15.14■□□□□ 0.01
USP49-201ENST00000373006 TFAP4Q01664 338 aa15.14■□□□□ 0.01
USP49-201ENST00000373006 CFAP221Q4G0U5 840 aa15.14■□□□□ 0.01
USP49-201ENST00000373006 SMIM5Q71RC9 77 aa15.14■□□□□ 0.01
USP49-201ENST00000373006 RPAINQ86UA6 219 aa15.14■□□□□ 0.01
USP49-201ENST00000373006 PROCA1Q8NCQ7 364 aaPredicted RBP15.14■□□□□ 0.01
USP49-201ENST00000373006 PNMA1Q8ND90 353 aa15.14■□□□□ 0.01
USP49-201ENST00000373006 FLT1P17948 1338 aa15.14■□□□□ 0.01
USP49-201ENST00000373006 SLC35G1Q2M3R5 365 aa15.14■□□□□ 0.01
USP49-201ENST00000373006 NAA35Q5VZE5 725 aa15.14■□□□□ 0.01
USP49-201ENST00000373006 NOX5Q96PH1 765 aa15.14■□□□□ 0.01
USP49-201ENST00000373006 COL5A2P05997 1499 aaPredicted RBP15.14■□□□□ 0.01
USP49-201ENST00000373006 M0R2N6 131 aa15.14■□□□□ 0.01
USP49-201ENST00000373006 NEBLO76041 1014 aa15.14■□□□□ 0.01
USP49-201ENST00000373006 HNRNPH3P31942 346 aaKnown RBP15.14■□□□□ 0.01
USP49-201ENST00000373006 ARID5AQ03989 594 aa15.14■□□□□ 0.01
USP49-201ENST00000373006 ACTN3Q08043 901 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms