RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 SPATA31A3Q5VYP0 1347 aa21.51■■□□□ 1.03
LMO4-202ENST00000370544 CYP27B1O15528 508 aa21.51■■□□□ 1.03
LMO4-202ENST00000370544 SLFN14P0C7P3 912 aa21.51■■□□□ 1.03
LMO4-202ENST00000370544 LIFRP42702 1097 aa21.51■■□□□ 1.03
LMO4-202ENST00000370544 ZNF131P52739 623 aa21.51■■□□□ 1.03
LMO4-202ENST00000370544 GAS2L3Q86XJ1 694 aa21.51■■□□□ 1.03
LMO4-202ENST00000370544 MIS12Q9H081 205 aa21.51■■□□□ 1.03
LMO4-202ENST00000370544 RIC8AQ9NPQ8 531 aa21.51■■□□□ 1.03
LMO4-202ENST00000370544 ADGRL3Q9HAR2 1447 aa21.51■■□□□ 1.03
LMO4-202ENST00000370544 PPP2R5AQ15172 486 aa21.51■■□□□ 1.03
LMO4-202ENST00000370544 SRGAP1Q7Z6B7 1085 aa21.51■■□□□ 1.03
LMO4-202ENST00000370544 PALM2Q8IXS6 379 aa21.51■■□□□ 1.03
LMO4-202ENST00000370544 PI4KBQ9UBF8 816 aa21.51■■□□□ 1.03
LMO4-202ENST00000370544 MAN1B1Q9UKM7 699 aa21.51■■□□□ 1.03
LMO4-202ENST00000370544 CD2APQ9Y5K6 639 aa21.51■■□□□ 1.03
LMO4-202ENST00000370544 EFCAB8A8MWE9 144 aa21.51■■□□□ 1.03
LMO4-202ENST00000370544 CAPN9O14815 690 aa21.51■■□□□ 1.03
LMO4-202ENST00000370544 MFAP3P55082 362 aa21.51■■□□□ 1.03
LMO4-202ENST00000370544 GRAMD1CQ8IYS0 662 aa21.51■■□□□ 1.03
LMO4-202ENST00000370544 ZNF335Q9H4Z2 1342 aaPredicted RBP21.51■■□□□ 1.03
LMO4-202ENST00000370544 PSDA5PKW4 1024 aaPredicted RBP21.51■■□□□ 1.03
LMO4-202ENST00000370544 HGSO14964 777 aaPredicted RBP21.51■■□□□ 1.03
LMO4-202ENST00000370544 RGS16O15492 202 aaPredicted RBP21.51■■□□□ 1.03
LMO4-202ENST00000370544 MCAMP43121 646 aa21.51■■□□□ 1.03
LMO4-202ENST00000370544 NSFP46459 744 aaKnown RBP21.51■■□□□ 1.03
LMO4-202ENST00000370544 NEDD9Q14511 834 aa21.51■■□□□ 1.03
LMO4-202ENST00000370544 VSIG1Q86XK7 387 aa21.51■■□□□ 1.03
LMO4-202ENST00000370544 STK17AQ9UEE5 414 aa21.51■■□□□ 1.03
LMO4-202ENST00000370544 CNGA1P29973 690 aa21.5■■□□□ 1.03
LMO4-202ENST00000370544 PSMC2P35998 433 aaKnown RBP21.5■■□□□ 1.03
LMO4-202ENST00000370544 HLFQ16534 295 aa21.5■■□□□ 1.03
LMO4-202ENST00000370544 KRT12Q99456 494 aa21.5■■□□□ 1.03
LMO4-202ENST00000370544 BZW2Q9Y6E2 419 aaKnown RBP21.5■■□□□ 1.03
LMO4-202ENST00000370544 KIF22Q14807 665 aa21.5■■□□□ 1.03
LMO4-202ENST00000370544 LRRC41Q15345 812 aa21.5■■□□□ 1.03
LMO4-202ENST00000370544 PFDN4Q9NQP4 134 aa21.5■■□□□ 1.03
LMO4-202ENST00000370544 PODXL2Q9NZ53 605 aa21.5■■□□□ 1.03
LMO4-202ENST00000370544 NPR1P16066 1061 aa21.5■■□□□ 1.03
LMO4-202ENST00000370544 CACNB1Q02641 598 aaPredicted RBP21.5■■□□□ 1.03
LMO4-202ENST00000370544 CCDC62Q6P9F0 684 aa21.5■■□□□ 1.03
LMO4-202ENST00000370544 CLEC4GQ6UXB4 293 aa21.5■■□□□ 1.03
LMO4-202ENST00000370544 CABS1Q96KC9 395 aa21.5■■□□□ 1.03
LMO4-202ENST00000370544 USP17L3A6NCW0 530 aa21.5■■□□□ 1.03
LMO4-202ENST00000370544 USP17L4A6NCW7 530 aa21.5■■□□□ 1.03
LMO4-202ENST00000370544 POLR2BP30876 1174 aaKnown RBP21.5■■□□□ 1.03
LMO4-202ENST00000370544 INPP5BP32019 993 aa21.5■■□□□ 1.03
LMO4-202ENST00000370544 GABPB1Q06547 395 aaPredicted RBP21.5■■□□□ 1.03
LMO4-202ENST00000370544 USP17L1Q7RTZ2 530 aa21.5■■□□□ 1.03
LMO4-202ENST00000370544 SESTD1Q86VW0 696 aa21.5■■□□□ 1.03
LMO4-202ENST00000370544 RPAP1Q9BWH6 1393 aaPredicted RBP21.5■■□□□ 1.03
LMO4-202ENST00000370544 MYL1P05976 194 aa21.5■■□□□ 1.03
LMO4-202ENST00000370544 ARHGAP31Q2M1Z3 1444 aa21.5■■□□□ 1.03
LMO4-202ENST00000370544 CTAGE3PQ8IX95 158 aa21.5■■□□□ 1.03
LMO4-202ENST00000370544 SARNPP82979 210 aaKnown RBP21.49■■□□□ 1.03
LMO4-202ENST00000370544 RASSF7Q02833 373 aa21.49■■□□□ 1.03
LMO4-202ENST00000370544 CCDC93Q567U6 631 aa21.49■■□□□ 1.03
LMO4-202ENST00000370544 NT5C1BQ96P26 610 aa21.49■■□□□ 1.03
LMO4-202ENST00000370544 CLTCL1P53675 1640 aa21.49■■□□□ 1.03
LMO4-202ENST00000370544 RAD17O75943 681 aa21.49■■□□□ 1.03
LMO4-202ENST00000370544 RESTQ13127 1097 aa21.49■■□□□ 1.03
LMO4-202ENST00000370544 POTEDQ86YR6 584 aa21.49■■□□□ 1.03
LMO4-202ENST00000370544 AFPP02771 609 aaKnown RBP21.49■■□□□ 1.03
LMO4-202ENST00000370544 MIS18BP1Q6P0N0 1132 aa21.49■■□□□ 1.03
LMO4-202ENST00000370544 DPH5Q9H2P9 285 aa21.49■■□□□ 1.03
LMO4-202ENST00000370544 LPXNO60711 386 aa21.49■■□□□ 1.03
LMO4-202ENST00000370544 LMNB1P20700 586 aa21.49■■□□□ 1.03
LMO4-202ENST00000370544 CCNA1P78396 465 aa21.49■■□□□ 1.03
LMO4-202ENST00000370544 PTK2Q05397 1052 aa21.49■■□□□ 1.03
LMO4-202ENST00000370544 SMAP1Q8IYB5 467 aaPredicted RBP21.49■■□□□ 1.03
LMO4-202ENST00000370544 ACCSQ96QU6 501 aa21.49■■□□□ 1.03
LMO4-202ENST00000370544 CDK8P49336 464 aa21.48■■□□□ 1.03
LMO4-202ENST00000370544 SLC12A2P55011 1212 aa21.48■■□□□ 1.03
LMO4-202ENST00000370544 RBL2Q08999 1139 aa21.48■■□□□ 1.03
LMO4-202ENST00000370544 PPP1R13BQ96KQ4 1090 aa21.48■■□□□ 1.03
LMO4-202ENST00000370544 NACC1Q96RE7 527 aa21.48■■□□□ 1.03
LMO4-202ENST00000370544 RASSF4Q9H2L5 321 aa21.48■■□□□ 1.03
LMO4-202ENST00000370544 PHBP35232 272 aa21.48■■□□□ 1.03
LMO4-202ENST00000370544 SUPT20HL1Q3ZLR7 823 aa21.48■■□□□ 1.03
LMO4-202ENST00000370544 ANKRD42Q8N9B4 389 aa21.48■■□□□ 1.03
LMO4-202ENST00000370544 MGARPQ8TDB4 240 aa21.48■■□□□ 1.03
LMO4-202ENST00000370544 SLC7A3Q8WY07 619 aa21.48■■□□□ 1.03
LMO4-202ENST00000370544 MCUR1Q96AQ8 359 aa21.48■■□□□ 1.03
LMO4-202ENST00000370544 COA1Q9GZY4 146 aa21.48■■□□□ 1.03
LMO4-202ENST00000370544 SRPRBQ9Y5M8 271 aaKnown RBP21.48■■□□□ 1.03
LMO4-202ENST00000370544 ADAT2Q7Z6V5 191 aaKnown RBP21.48■■□□□ 1.03
LMO4-202ENST00000370544 ATP2A3Q93084 1043 aa21.48■■□□□ 1.03
LMO4-202ENST00000370544 HAUS1Q96CS2 278 aa21.48■■□□□ 1.03
LMO4-202ENST00000370544 PPFIA4O75335 1185 aa21.48■■□□□ 1.03
LMO4-202ENST00000370544 CCND2P30279 289 aa21.48■■□□□ 1.03
LMO4-202ENST00000370544 SEPT14Q6ZU15 432 aa21.48■■□□□ 1.03
LMO4-202ENST00000370544 FAM186BQ8IYM0 893 aa21.48■■□□□ 1.03
LMO4-202ENST00000370544 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.48■■□□□ 1.03
LMO4-202ENST00000370544 PCDHB6Q9Y5E3 794 aa21.48■■□□□ 1.03
LMO4-202ENST00000370544 IGKV5-2P06315 115 aa21.47■■□□□ 1.03
LMO4-202ENST00000370544 OSBPP22059 807 aa21.47■■□□□ 1.03
LMO4-202ENST00000370544 BPIFB4P59827 614 aa21.47■■□□□ 1.03
LMO4-202ENST00000370544 ANKRD13CQ8N6S4 541 aa21.47■■□□□ 1.03
LMO4-202ENST00000370544 GPR101Q96P66 508 aaPredicted RBP21.47■■□□□ 1.03
LMO4-202ENST00000370544 NRBP1Q9UHY1 535 aa21.47■■□□□ 1.03
LMO4-202ENST00000370544 ZNF215Q9UL58 517 aaPredicted RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms