RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 ADD3Q9UEY8 706 aaKnown RBP18.21■□□□□ 0.51
SSR4-204ENST00000370087 KIAA1217Q5T5P2 1943 aa18.2■□□□□ 0.5
SSR4-204ENST00000370087 A6NJR5 290 aa18.2■□□□□ 0.5
SSR4-204ENST00000370087 SLC3A2P08195 630 aaKnown RBP18.2■□□□□ 0.5
SSR4-204ENST00000370087 WDR5P61964 334 aaKnown RBP18.2■□□□□ 0.5
SSR4-204ENST00000370087 PPP2R5BQ15173 497 aa18.2■□□□□ 0.5
SSR4-204ENST00000370087 SYDE2Q5VT97 1194 aa18.2■□□□□ 0.5
SSR4-204ENST00000370087 BTNL9Q6UXG8 535 aa18.2■□□□□ 0.5
SSR4-204ENST00000370087 RETREG2Q8NC44 543 aa18.2■□□□□ 0.5
SSR4-204ENST00000370087 PI4K2BQ8TCG2 481 aa18.2■□□□□ 0.5
SSR4-204ENST00000370087 DCAF4Q8WV16 495 aa18.2■□□□□ 0.5
SSR4-204ENST00000370087 DHX38Q92620 1227 aaKnown RBP18.2■□□□□ 0.5
SSR4-204ENST00000370087 GPATCH3Q96I76 525 aa18.2■□□□□ 0.5
SSR4-204ENST00000370087 GPHNQ9NQX3 736 aaPredicted RBP18.2■□□□□ 0.5
SSR4-204ENST00000370087 ARIH1Q9Y4X5 557 aaPredicted RBP18.2■□□□□ 0.5
SSR4-204ENST00000370087 EDNRBP24530 442 aa18.19■□□□□ 0.5
SSR4-204ENST00000370087 CHMP4BP1P59074 171 aa18.19■□□□□ 0.5
SSR4-204ENST00000370087 VPS53Q5VIR6 699 aa18.19■□□□□ 0.5
SSR4-204ENST00000370087 GPCPD1Q9NPB8 672 aa18.19■□□□□ 0.5
SSR4-204ENST00000370087 RANBP6O60518 1105 aaKnown RBP18.18■□□□□ 0.5
SSR4-204ENST00000370087 GPR37L1O60883 481 aa18.18■□□□□ 0.5
SSR4-204ENST00000370087 BAIAP3O94812 1187 aa18.18■□□□□ 0.5
SSR4-204ENST00000370087 PDE4DQ08499 809 aa18.18■□□□□ 0.5
SSR4-204ENST00000370087 BFSP2Q13515 415 aa18.18■□□□□ 0.5
SSR4-204ENST00000370087 GDF6Q6KF10 455 aaPredicted RBP18.18■□□□□ 0.5
SSR4-204ENST00000370087 FSD1Q9BTV5 496 aa18.18■□□□□ 0.5
SSR4-204ENST00000370087 DCTPP1Q9H773 170 aa18.18■□□□□ 0.5
SSR4-204ENST00000370087 MTUS1Q9ULD2 1270 aa18.18■□□□□ 0.5
SSR4-204ENST00000370087 LOC102724159A0A0B4J2E5 919 aa18.17■□□□□ 0.5
SSR4-204ENST00000370087 KIF28PB7ZC32 967 aa18.17■□□□□ 0.5
SSR4-204ENST00000370087 RPS6P62753 249 aaKnown RBP18.17■□□□□ 0.5
SSR4-204ENST00000370087 PTPN11Q06124 597 aaPredicted RBP18.17■□□□□ 0.5
SSR4-204ENST00000370087 PWP2Q15269 919 aaKnown RBP18.17■□□□□ 0.5
SSR4-204ENST00000370087 PTGISQ16647 500 aa18.17■□□□□ 0.5
SSR4-204ENST00000370087 RNF207Q6ZRF8 634 aa18.17■□□□□ 0.5
SSR4-204ENST00000370087 SCFD2Q8WU76 684 aa18.17■□□□□ 0.5
SSR4-204ENST00000370087 TMEM47Q9BQJ4 181 aa18.17■□□□□ 0.5
SSR4-204ENST00000370087 RAD50Q92878 1312 aa18.17■□□□□ 0.5
SSR4-204ENST00000370087 ATG2AQ2TAZ0 1938 aa18.16■□□□□ 0.5
SSR4-204ENST00000370087 PI4K2BG5E9Z4 385 aa18.16■□□□□ 0.5
SSR4-204ENST00000370087 NKRFO15226 690 aaKnown RBP eCLIP18.16■□□□□ 0.5
SSR4-204ENST00000370087 NBNO60934 754 aa18.16■□□□□ 0.5
SSR4-204ENST00000370087 TXNP10599 105 aaKnown RBP18.16■□□□□ 0.5
SSR4-204ENST00000370087 KCNJ6P48051 423 aa18.16■□□□□ 0.5
SSR4-204ENST00000370087 PPP4R3BQ5MIZ7 849 aa18.16■□□□□ 0.5
SSR4-204ENST00000370087 MIER1Q8N108 512 aa18.16■□□□□ 0.5
SSR4-204ENST00000370087 KAT2BQ92831 832 aa18.16■□□□□ 0.5
SSR4-204ENST00000370087 SUGCTQ9HAC7 445 aa18.16■□□□□ 0.5
SSR4-204ENST00000370087 ANAPC4Q9UJX5 808 aa18.16■□□□□ 0.5
SSR4-204ENST00000370087 NOD1Q9Y239 953 aa18.16■□□□□ 0.5
SSR4-204ENST00000370087 MICAL3Q7RTP6 2002 aa18.15■□□□□ 0.5
SSR4-204ENST00000370087 KPNA6O60684 536 aa18.15■□□□□ 0.5
SSR4-204ENST00000370087 LRRC8DQ7L1W4 858 aa18.15■□□□□ 0.5
SSR4-204ENST00000370087 AFAP1L1Q8TED9 768 aa18.15■□□□□ 0.5
SSR4-204ENST00000370087 AFG1LQ8WV93 481 aa18.15■□□□□ 0.5
SSR4-204ENST00000370087 CHMP4BQ9H444 224 aaKnown RBP18.15■□□□□ 0.5
SSR4-204ENST00000370087 UBE2ZQ9H832 354 aaPredicted RBP18.15■□□□□ 0.5
SSR4-204ENST00000370087 WDFY4Q6ZS81 3184 aa18.14■□□□□ 0.49
SSR4-204ENST00000370087 LINC01553A4QN01 128 aa18.14■□□□□ 0.49
SSR4-204ENST00000370087 ORC4O43929 436 aa18.14■□□□□ 0.49
SSR4-204ENST00000370087 MMP3P08254 477 aa18.14■□□□□ 0.49
SSR4-204ENST00000370087 PDHBP11177 359 aa18.14■□□□□ 0.49
SSR4-204ENST00000370087 ARHGAP1Q07960 439 aa18.14■□□□□ 0.49
SSR4-204ENST00000370087 BRDTQ58F21 947 aaPredicted RBP18.14■□□□□ 0.49
SSR4-204ENST00000370087 CCDC62Q6P9F0 684 aa18.14■□□□□ 0.49
SSR4-204ENST00000370087 WNT8BQ93098 351 aa18.14■□□□□ 0.49
SSR4-204ENST00000370087 TTC41PQ6P2S7 1318 aa18.14■□□□□ 0.49
SSR4-204ENST00000370087 MYH7BA7E2Y1 1941 aa18.13■□□□□ 0.49
SSR4-204ENST00000370087 MUC6Q6W4X9 2439 aa18.13■□□□□ 0.49
SSR4-204ENST00000370087 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.13■□□□□ 0.49
SSR4-204ENST00000370087 CXCL10P02778 98 aa18.13■□□□□ 0.49
SSR4-204ENST00000370087 FGRP09769 529 aa18.13■□□□□ 0.49
SSR4-204ENST00000370087 TOP1P11387 765 aaKnown RBP18.13■□□□□ 0.49
SSR4-204ENST00000370087 SELPP16109 830 aa18.13■□□□□ 0.49
SSR4-204ENST00000370087 ERVK-21P61565 698 aa18.13■□□□□ 0.49
SSR4-204ENST00000370087 LY6KQ17RY6 165 aa18.13■□□□□ 0.49
SSR4-204ENST00000370087 LRRFIP1Q32MZ4 808 aaKnown RBP18.13■□□□□ 0.49
SSR4-204ENST00000370087 FAM117BQ6P1L5 589 aa18.13■□□□□ 0.49
SSR4-204ENST00000370087 CNKSR3Q6P9H4 555 aa18.13■□□□□ 0.49
SSR4-204ENST00000370087 TRAF7Q6Q0C0 670 aa18.13■□□□□ 0.49
SSR4-204ENST00000370087 SESTD1Q86VW0 696 aa18.13■□□□□ 0.49
SSR4-204ENST00000370087 CAGE1Q8TC20 777 aa18.13■□□□□ 0.49
SSR4-204ENST00000370087 ZBED2Q9BTP6 218 aa18.13■□□□□ 0.49
SSR4-204ENST00000370087 CPVLQ9H3G5 476 aa18.13■□□□□ 0.49
SSR4-204ENST00000370087 NLRC5Q86WI3 1866 aa18.12■□□□□ 0.49
SSR4-204ENST00000370087 MYH6P13533 1939 aa18.12■□□□□ 0.49
SSR4-204ENST00000370087 GJB5O95377 273 aa18.12■□□□□ 0.49
SSR4-204ENST00000370087 CKBP12277 381 aa18.12■□□□□ 0.49
SSR4-204ENST00000370087 IL9P15248 144 aa18.12■□□□□ 0.49
SSR4-204ENST00000370087 RBL2Q08999 1139 aa18.12■□□□□ 0.49
SSR4-204ENST00000370087 ZNF543Q08ER8 600 aa18.12■□□□□ 0.49
SSR4-204ENST00000370087 MBTPS1Q14703 1052 aa18.12■□□□□ 0.49
SSR4-204ENST00000370087 USH1GQ495M9 461 aa18.12■□□□□ 0.49
SSR4-204ENST00000370087 RRP12Q5JTH9 1297 aaKnown RBP18.12■□□□□ 0.49
SSR4-204ENST00000370087 DNERQ8NFT8 737 aa18.12■□□□□ 0.49
SSR4-204ENST00000370087 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.12■□□□□ 0.49
SSR4-204ENST00000370087 TBC1D5Q92609 795 aa18.12■□□□□ 0.49
SSR4-204ENST00000370087 LMCD1Q9NZU5 365 aa18.12■□□□□ 0.49
SSR4-204ENST00000370087 COL20A1Q9P218 1284 aa18.12■□□□□ 0.49
SSR4-204ENST00000370087 RCAN3Q9UKA8 241 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms