RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 TBC1D5Q92609 795 aa15.8■□□□□ 0.12
SSR4-202ENST00000370085 UNC93B1Q9H1C4 597 aa15.8■□□□□ 0.12
SSR4-202ENST00000370085 VTA1Q9NP79 307 aa15.8■□□□□ 0.12
SSR4-202ENST00000370085 ORC3Q9UBD5 711 aaPredicted RBP15.8■□□□□ 0.12
SSR4-202ENST00000370085 ZHX1Q9UKY1 873 aaPredicted RBP15.8■□□□□ 0.12
SSR4-202ENST00000370085 KIF3AQ9Y496 699 aa15.8■□□□□ 0.12
SSR4-202ENST00000370085 MCM3APO60318 1980 aa15.8■□□□□ 0.12
SSR4-202ENST00000370085 SEPT4O43236 478 aa15.79■□□□□ 0.12
SSR4-202ENST00000370085 IGHA2P01877 340 aa15.79■□□□□ 0.12
SSR4-202ENST00000370085 AKR1A1P14550 325 aa15.79■□□□□ 0.12
SSR4-202ENST00000370085 NLRP5P59047 1200 aa15.79■□□□□ 0.12
SSR4-202ENST00000370085 HMGN5P82970 282 aaKnown RBP15.79■□□□□ 0.12
SSR4-202ENST00000370085 TRIM32Q13049 653 aa15.79■□□□□ 0.12
SSR4-202ENST00000370085 TRIM29Q14134 588 aa15.79■□□□□ 0.12
SSR4-202ENST00000370085 MTFR1Q15390 333 aa15.79■□□□□ 0.12
SSR4-202ENST00000370085 PKN1Q16512 942 aa15.79■□□□□ 0.12
SSR4-202ENST00000370085 GALNT17Q6IS24 598 aa15.79■□□□□ 0.12
SSR4-202ENST00000370085 CCDC83Q8IWF9 413 aa15.79■□□□□ 0.12
SSR4-202ENST00000370085 MORC4Q8TE76 937 aa15.79■□□□□ 0.12
SSR4-202ENST00000370085 FGD4Q96M96 766 aa15.79■□□□□ 0.12
SSR4-202ENST00000370085 TAAR1Q96RJ0 339 aa15.79■□□□□ 0.12
SSR4-202ENST00000370085 ZMYND12Q9H0C1 365 aa15.79■□□□□ 0.12
SSR4-202ENST00000370085 PAK6Q9NQU5 681 aaPredicted RBP15.79■□□□□ 0.12
SSR4-202ENST00000370085 PXMP2Q9NR77 195 aa15.79■□□□□ 0.12
SSR4-202ENST00000370085 FAM184BQ9ULE4 1060 aa15.79■□□□□ 0.12
SSR4-202ENST00000370085 LCTP09848 1927 aa15.78■□□□□ 0.12
SSR4-202ENST00000370085 MEIS2O14770 477 aa15.78■□□□□ 0.12
SSR4-202ENST00000370085 PPFIA3O75145 1194 aa15.78■□□□□ 0.12
SSR4-202ENST00000370085 STAM2O75886 525 aa15.78■□□□□ 0.12
SSR4-202ENST00000370085 LARGE1O95461 756 aa15.78■□□□□ 0.12
SSR4-202ENST00000370085 SNAI1O95863 264 aaPredicted RBP15.78■□□□□ 0.12
SSR4-202ENST00000370085 RARBP10826 455 aa15.78■□□□□ 0.12
SSR4-202ENST00000370085 EIF2AK2P19525 551 aaKnown RBP15.78■□□□□ 0.12
SSR4-202ENST00000370085 CCND2P30279 289 aa15.78■□□□□ 0.12
SSR4-202ENST00000370085 AP3B2Q13367 1082 aa15.78■□□□□ 0.12
SSR4-202ENST00000370085 XRRA1Q6P2D8 792 aa15.78■□□□□ 0.12
SSR4-202ENST00000370085 USP17L6PQ6QN14 398 aa15.78■□□□□ 0.12
SSR4-202ENST00000370085 DEFB118Q96PH6 123 aa15.78■□□□□ 0.12
SSR4-202ENST00000370085 BRMS1Q9HCU9 246 aa15.78■□□□□ 0.12
SSR4-202ENST00000370085 EIF3JO75822 258 aaKnown RBP15.77■□□□□ 0.12
SSR4-202ENST00000370085 TFRCP02786 760 aaKnown RBP15.77■□□□□ 0.12
SSR4-202ENST00000370085 NR3C2P08235 984 aa15.77■□□□□ 0.12
SSR4-202ENST00000370085 EDNRBP24530 442 aa15.77■□□□□ 0.12
SSR4-202ENST00000370085 CCND3P30281 292 aaPredicted RBP15.77■□□□□ 0.12
SSR4-202ENST00000370085 REXO1Q8N1G1 1221 aaKnown RBP15.77■□□□□ 0.12
SSR4-202ENST00000370085 FAM184AQ8NB25 1140 aa15.77■□□□□ 0.12
SSR4-202ENST00000370085 NSUN7Q8NE18 718 aaKnown RBP15.77■□□□□ 0.12
SSR4-202ENST00000370085 PURBQ96QR8 312 aaKnown RBP15.77■□□□□ 0.12
SSR4-202ENST00000370085 SPC25Q9HBM1 224 aa15.77■□□□□ 0.12
SSR4-202ENST00000370085 VPS54Q9P1Q0 977 aa15.77■□□□□ 0.12
SSR4-202ENST00000370085 COL20A1Q9P218 1284 aa15.77■□□□□ 0.12
SSR4-202ENST00000370085 DDX20Q9UHI6 824 aaKnown RBP15.77■□□□□ 0.12
SSR4-202ENST00000370085 SGPL1O95470 568 aa15.76■□□□□ 0.11
SSR4-202ENST00000370085 MYCLP12524 364 aaPredicted RBP15.76■□□□□ 0.11
SSR4-202ENST00000370085 GJA8P48165 433 aa15.76■□□□□ 0.11
SSR4-202ENST00000370085 PGM5Q15124 567 aa15.76■□□□□ 0.11
SSR4-202ENST00000370085 GNPTABQ3T906 1256 aa15.76■□□□□ 0.11
SSR4-202ENST00000370085 PRAMEF19Q5SWL8 479 aa15.76■□□□□ 0.11
SSR4-202ENST00000370085 IQSEC1Q6DN90 963 aa15.76■□□□□ 0.11
SSR4-202ENST00000370085 KCNV1Q6PIU1 500 aa15.76■□□□□ 0.11
SSR4-202ENST00000370085 U2AF1L4Q8WU68 220 aaKnown RBP15.76■□□□□ 0.11
SSR4-202ENST00000370085 SCFD2Q8WU76 684 aa15.76■□□□□ 0.11
SSR4-202ENST00000370085 TMX3Q96JJ7 454 aa15.76■□□□□ 0.11
SSR4-202ENST00000370085 PDCD2LQ9BRP1 358 aa15.76■□□□□ 0.11
SSR4-202ENST00000370085 ALG1Q9BT22 464 aa15.76■□□□□ 0.11
SSR4-202ENST00000370085 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.76■□□□□ 0.11
SSR4-202ENST00000370085 ASTN1O14525 1302 aa15.75■□□□□ 0.11
SSR4-202ENST00000370085 CTDNEP1O95476 244 aa15.75■□□□□ 0.11
SSR4-202ENST00000370085 ZNF865P0CJ78 1059 aaPredicted RBP15.75■□□□□ 0.11
SSR4-202ENST00000370085 TNFAIP2Q03169 654 aa15.75■□□□□ 0.11
SSR4-202ENST00000370085 TTLL4Q14679 1199 aa15.75■□□□□ 0.11
SSR4-202ENST00000370085 UBE2SQ16763 222 aa15.75■□□□□ 0.11
SSR4-202ENST00000370085 CCDC144BQ3MJ40 725 aa15.75■□□□□ 0.11
SSR4-202ENST00000370085 TYW1BQ6NUM6 668 aa15.75■□□□□ 0.11
SSR4-202ENST00000370085 EEPD1Q7L9B9 569 aa15.75■□□□□ 0.11
SSR4-202ENST00000370085 FBXO16Q8IX29 292 aaPredicted RBP15.75■□□□□ 0.11
SSR4-202ENST00000370085 ARRDC4Q8NCT1 418 aa15.75■□□□□ 0.11
SSR4-202ENST00000370085 PCDHA6Q9UN73 950 aa15.75■□□□□ 0.11
SSR4-202ENST00000370085 PCDHA8Q9Y5H6 950 aa15.75■□□□□ 0.11
SSR4-202ENST00000370085 FRMPD4Q14CM0 1322 aa15.74■□□□□ 0.11
SSR4-202ENST00000370085 NKRFO15226 690 aaKnown RBP eCLIP15.74■□□□□ 0.11
SSR4-202ENST00000370085 PCNX4Q63HM2 1172 aa15.74■□□□□ 0.11
SSR4-202ENST00000370085 VSIG10LQ86VR7 867 aa15.74■□□□□ 0.11
SSR4-202ENST00000370085 ANKLE1Q8NAG6 615 aa15.74■□□□□ 0.11
SSR4-202ENST00000370085 TRPV1Q8NER1 839 aa15.74■□□□□ 0.11
SSR4-202ENST00000370085 ANO3Q9BYT9 981 aa15.74■□□□□ 0.11
SSR4-202ENST00000370085 XPNPEP3Q9NQH7 507 aa15.74■□□□□ 0.11
SSR4-202ENST00000370085 PCDHA4Q9UN74 947 aa15.74■□□□□ 0.11
SSR4-202ENST00000370085 KIAA1217Q5T5P2 1943 aa15.73■□□□□ 0.11
SSR4-202ENST00000370085 JAK2O60674 1132 aa15.73■□□□□ 0.11
SSR4-202ENST00000370085 DUSP11O75319 330 aaKnown RBP15.73■□□□□ 0.11
SSR4-202ENST00000370085 SOX10P56693 466 aa15.73■□□□□ 0.11
SSR4-202ENST00000370085 SAFBQ15424 915 aaKnown RBP eCLIP15.73■□□□□ 0.11
SSR4-202ENST00000370085 BRDTQ58F21 947 aaPredicted RBP15.73■□□□□ 0.11
SSR4-202ENST00000370085 JAKMIP3Q5VZ66 844 aa15.73■□□□□ 0.11
SSR4-202ENST00000370085 RNF180Q86T96 592 aa15.73■□□□□ 0.11
SSR4-202ENST00000370085 NLRX1Q86UT6 975 aa15.73■□□□□ 0.11
SSR4-202ENST00000370085 HSCBQ8IWL3 235 aa15.73■□□□□ 0.11
SSR4-202ENST00000370085 BLIDQ8IZY5 108 aa15.73■□□□□ 0.11
SSR4-202ENST00000370085 DAGLBQ8NCG7 672 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms