RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 SYTL5Q8TDW5 730 aaPredicted RBP13.99□□□□□ -0.17
TUBE1-202ENST00000368662 CRYGNQ8WXF5 182 aa13.99□□□□□ -0.17
TUBE1-202ENST00000368662 FERMT2Q96AC1 680 aa13.99□□□□□ -0.17
TUBE1-202ENST00000368662 TXNRD2Q9NNW7 524 aa13.99□□□□□ -0.17
TUBE1-202ENST00000368662 MORF4L1Q9UBU8 362 aa13.99□□□□□ -0.17
TUBE1-202ENST00000368662 NEMFO60524 1076 aa13.99□□□□□ -0.17
TUBE1-202ENST00000368662 DEFB115Q30KQ5 88 aa13.99□□□□□ -0.17
TUBE1-202ENST00000368662 IFNL1Q8IU54 200 aa13.99□□□□□ -0.17
TUBE1-202ENST00000368662 ANKRD35Q8N283 1001 aa13.99□□□□□ -0.17
TUBE1-202ENST00000368662 CYP39A1Q9NYL5 469 aa13.99□□□□□ -0.17
TUBE1-202ENST00000368662 PCDHA7Q9UN72 937 aa13.99□□□□□ -0.17
TUBE1-202ENST00000368662 SRPRBQ9Y5M8 271 aaKnown RBP13.99□□□□□ -0.17
TUBE1-202ENST00000368662 DDX49Q9Y6V7 483 aaKnown RBP13.99□□□□□ -0.17
TUBE1-202ENST00000368662 CYP3A7-CYP3A51PA0A087WV96 503 aa13.98□□□□□ -0.17
TUBE1-202ENST00000368662 A0A1W2PQ27 194 aa13.98□□□□□ -0.17
TUBE1-202ENST00000368662 A0A1W2PQ64 194 aa13.98□□□□□ -0.17
TUBE1-202ENST00000368662 A0A1W2PQD8 194 aa13.98□□□□□ -0.17
TUBE1-202ENST00000368662 IGF2BP3O00425 579 aaKnown RBP eCLIP13.98□□□□□ -0.17
TUBE1-202ENST00000368662 WNT7AO00755 349 aa13.98□□□□□ -0.17
TUBE1-202ENST00000368662 CUTAO60888 179 aa13.98□□□□□ -0.17
TUBE1-202ENST00000368662 CYP3A7P24462 503 aa13.98□□□□□ -0.17
TUBE1-202ENST00000368662 MARCKSP29966 332 aaPredicted RBP13.98□□□□□ -0.17
TUBE1-202ENST00000368662 CIITAP33076 1130 aa13.98□□□□□ -0.17
TUBE1-202ENST00000368662 PRPHP41219 470 aa13.98□□□□□ -0.17
TUBE1-202ENST00000368662 TM4SF4P48230 202 aa13.98□□□□□ -0.17
TUBE1-202ENST00000368662 BAATQ14032 418 aaPredicted RBP13.98□□□□□ -0.17
TUBE1-202ENST00000368662 FAM110CQ1W6H9 321 aa13.98□□□□□ -0.17
TUBE1-202ENST00000368662 A1CFQ9NQ94 594 aaKnown RBP13.98□□□□□ -0.17
TUBE1-202ENST00000368662 GADD45BO75293 160 aaPredicted RBP13.97□□□□□ -0.17
TUBE1-202ENST00000368662 ERCC3P19447 782 aa13.97□□□□□ -0.17
TUBE1-202ENST00000368662 PTPREP23469 700 aa13.97□□□□□ -0.17
TUBE1-202ENST00000368662 TAF1CQ15572 869 aaPredicted RBP13.97□□□□□ -0.17
TUBE1-202ENST00000368662 KLHL40Q2TBA0 621 aa13.97□□□□□ -0.17
TUBE1-202ENST00000368662 SLC30A10Q6XR72 485 aa13.97□□□□□ -0.17
TUBE1-202ENST00000368662 ZNF579Q8NAF0 562 aaKnown RBP13.97□□□□□ -0.17
TUBE1-202ENST00000368662 DDX25Q9UHL0 483 aaKnown RBP13.97□□□□□ -0.17
TUBE1-202ENST00000368662 FRMPD4Q14CM0 1322 aa13.97□□□□□ -0.17
TUBE1-202ENST00000368662 RPTORQ8N122 1335 aa13.97□□□□□ -0.17
TUBE1-202ENST00000368662 TRAK2O60296 914 aa13.97□□□□□ -0.17
TUBE1-202ENST00000368662 ALDH1A1P00352 501 aa13.97□□□□□ -0.17
TUBE1-202ENST00000368662 ZNF76P36508 570 aa13.97□□□□□ -0.17
TUBE1-202ENST00000368662 Q3C1V9 767 aa13.97□□□□□ -0.17
TUBE1-202ENST00000368662 Q4G0T1 1027 aa13.97□□□□□ -0.17
TUBE1-202ENST00000368662 CYP4F22Q6NT55 531 aa13.97□□□□□ -0.17
TUBE1-202ENST00000368662 XRRA1Q6P2D8 792 aa13.97□□□□□ -0.17
TUBE1-202ENST00000368662 ANKRD13CQ8N6S4 541 aa13.97□□□□□ -0.17
TUBE1-202ENST00000368662 C4orf32Q8N8J7 132 aa13.97□□□□□ -0.17
TUBE1-202ENST00000368662 MBOAT7Q96N66 472 aa13.97□□□□□ -0.17
TUBE1-202ENST00000368662 RMDN3Q96TC7 470 aa13.97□□□□□ -0.17
TUBE1-202ENST00000368662 COL20A1Q9P218 1284 aa13.97□□□□□ -0.17
TUBE1-202ENST00000368662 FBXO2Q9UK22 296 aaPredicted RBP13.97□□□□□ -0.17
TUBE1-202ENST00000368662 TDP2O95551 362 aa13.96□□□□□ -0.17
TUBE1-202ENST00000368662 OR52Z1P0C646 297 aa13.96□□□□□ -0.17
TUBE1-202ENST00000368662 KCTD2Q14681 263 aa13.96□□□□□ -0.17
TUBE1-202ENST00000368662 AXDND1Q5T1B0 1012 aaPredicted RBP13.96□□□□□ -0.17
TUBE1-202ENST00000368662 ARHGEF16Q5VV41 709 aa13.96□□□□□ -0.17
TUBE1-202ENST00000368662 CCAR1Q8IX12 1150 aaKnown RBP13.96□□□□□ -0.17
TUBE1-202ENST00000368662 DNERQ8NFT8 737 aa13.96□□□□□ -0.17
TUBE1-202ENST00000368662 NSUN6Q8TEA1 469 aaKnown RBP13.96□□□□□ -0.17
TUBE1-202ENST00000368662 ZFYVE28Q9HCC9 887 aa13.96□□□□□ -0.17
TUBE1-202ENST00000368662 MYH7BA7E2Y1 1941 aa13.96□□□□□ -0.17
TUBE1-202ENST00000368662 EDIL3O43854 480 aa13.96□□□□□ -0.18
TUBE1-202ENST00000368662 PEX10O60683 326 aa13.96□□□□□ -0.18
TUBE1-202ENST00000368662 CALCRLQ16602 461 aa13.96□□□□□ -0.18
TUBE1-202ENST00000368662 PCNX4Q63HM2 1172 aa13.96□□□□□ -0.18
TUBE1-202ENST00000368662 DTHD1Q6ZMT9 781 aa13.96□□□□□ -0.18
TUBE1-202ENST00000368662 PXMP2Q9NR77 195 aa13.96□□□□□ -0.18
TUBE1-202ENST00000368662 TBX3O15119 743 aa13.95□□□□□ -0.18
TUBE1-202ENST00000368662 FCER1AP12319 257 aa13.95□□□□□ -0.18
TUBE1-202ENST00000368662 CMA1P23946 247 aa13.95□□□□□ -0.18
TUBE1-202ENST00000368662 SETQ01105 290 aaPredicted RBP13.95□□□□□ -0.18
TUBE1-202ENST00000368662 GRM1Q13255 1194 aa13.95□□□□□ -0.18
TUBE1-202ENST00000368662 POTEDQ86YR6 584 aa13.95□□□□□ -0.18
TUBE1-202ENST00000368662 MRPS27Q92552 414 aaKnown RBP13.95□□□□□ -0.18
TUBE1-202ENST00000368662 CAPNS2Q96L46 248 aa13.95□□□□□ -0.18
TUBE1-202ENST00000368662 TAAR1Q96RJ0 339 aa13.95□□□□□ -0.18
TUBE1-202ENST00000368662 ADD3Q9UEY8 706 aaKnown RBP13.95□□□□□ -0.18
TUBE1-202ENST00000368662 B4DLN1 442 aa13.94□□□□□ -0.18
TUBE1-202ENST00000368662 STRNO43815 780 aa13.94□□□□□ -0.18
TUBE1-202ENST00000368662 SLC37A4O43826 429 aa13.94□□□□□ -0.18
TUBE1-202ENST00000368662 TLR2O60603 784 aa13.94□□□□□ -0.18
TUBE1-202ENST00000368662 LONP1P36776 959 aaKnown RBP13.94□□□□□ -0.18
TUBE1-202ENST00000368662 PGM5Q15124 567 aa13.94□□□□□ -0.18
TUBE1-202ENST00000368662 CEP55Q53EZ4 464 aa13.94□□□□□ -0.18
TUBE1-202ENST00000368662 CCDC73Q6ZRK6 1079 aa13.94□□□□□ -0.18
TUBE1-202ENST00000368662 SLFN12Q8IYM2 578 aa13.94□□□□□ -0.18
TUBE1-202ENST00000368662 ABRAQ8N0Z2 381 aa13.94□□□□□ -0.18
TUBE1-202ENST00000368662 GPT2Q8TD30 523 aa13.94□□□□□ -0.18
TUBE1-202ENST00000368662 MTMR9Q96QG7 549 aa13.94□□□□□ -0.18
TUBE1-202ENST00000368662 IWS1Q96ST2 819 aa13.94□□□□□ -0.18
TUBE1-202ENST00000368662 MMP19Q99542 508 aa13.94□□□□□ -0.18
TUBE1-202ENST00000368662 MPHOSPH6Q99547 160 aaKnown RBP13.94□□□□□ -0.18
TUBE1-202ENST00000368662 PDCD2LQ9BRP1 358 aa13.94□□□□□ -0.18
TUBE1-202ENST00000368662 RAB34Q9BZG1 259 aa13.94□□□□□ -0.18
TUBE1-202ENST00000368662 TMEM60Q9H2L4 133 aa13.94□□□□□ -0.18
TUBE1-202ENST00000368662 ADGRA2Q96PE1 1338 aa13.94□□□□□ -0.18
TUBE1-202ENST00000368662 VWA3AA6NCI4 1184 aa13.94□□□□□ -0.18
TUBE1-202ENST00000368662 FAM86B1E9PN63 330 aa13.94□□□□□ -0.18
TUBE1-202ENST00000368662 POTEB2H3BUK9 544 aa13.94□□□□□ -0.18
TUBE1-202ENST00000368662 MARCH6O60337 910 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms