RNA–Protein interactions for RNA: ENST00000366739.5

MRPL55-212, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-212ENST00000366739 LCHNA4D1U4 455 aa13.49□□□□□ -0.25
MRPL55-212ENST00000366739 A6NJR5 290 aa13.49□□□□□ -0.25
MRPL55-212ENST00000366739 KIF28PB7ZC32 967 aa13.49□□□□□ -0.25
MRPL55-212ENST00000366739 LPXNO60711 386 aa13.49□□□□□ -0.25
MRPL55-212ENST00000366739 HOXD11P31277 338 aaPredicted RBP13.49□□□□□ -0.25
MRPL55-212ENST00000366739 CHMP4BP1P59074 171 aa13.49□□□□□ -0.25
MRPL55-212ENST00000366739 RNF207Q6ZRF8 634 aa13.49□□□□□ -0.25
MRPL55-212ENST00000366739 TMCO2Q7Z6W1 182 aaPredicted RBP13.49□□□□□ -0.25
MRPL55-212ENST00000366739 SCFD2Q8WU76 684 aa13.49□□□□□ -0.25
MRPL55-212ENST00000366739 KHSRPQ92945 711 aaKnown RBP eCLIP13.49□□□□□ -0.25
MRPL55-212ENST00000366739 HLA-CQ95604 372 aa13.49□□□□□ -0.25
MRPL55-212ENST00000366739 ANAPC4Q9UJX5 808 aa13.49□□□□□ -0.25
MRPL55-212ENST00000366739 NOD1Q9Y239 953 aa13.49□□□□□ -0.25
MRPL55-212ENST00000366739 TANC1Q9C0D5 1861 aa13.48□□□□□ -0.25
MRPL55-212ENST00000366739 RBAK-RBAKDNI3L0D1 243 aa13.48□□□□□ -0.25
MRPL55-212ENST00000366739 NKRFO15226 690 aaKnown RBP eCLIP13.48□□□□□ -0.25
MRPL55-212ENST00000366739 ORC4O43929 436 aa13.48□□□□□ -0.25
MRPL55-212ENST00000366739 KPNA6O60684 536 aa13.48□□□□□ -0.25
MRPL55-212ENST00000366739 ARIH2O95376 493 aa13.48□□□□□ -0.25
MRPL55-212ENST00000366739 EDNRBP24530 442 aa13.48□□□□□ -0.25
MRPL55-212ENST00000366739 RPS6P62753 249 aaKnown RBP13.48□□□□□ -0.25
MRPL55-212ENST00000366739 PTPN11Q06124 597 aaPredicted RBP13.48□□□□□ -0.25
MRPL55-212ENST00000366739 BFSP2Q13515 415 aa13.48□□□□□ -0.25
MRPL55-212ENST00000366739 TMEM47Q9BQJ4 181 aa13.48□□□□□ -0.25
MRPL55-212ENST00000366739 BAIAP3O94812 1187 aa13.47□□□□□ -0.25
MRPL55-212ENST00000366739 FGRP09769 529 aa13.47□□□□□ -0.25
MRPL55-212ENST00000366739 TXNP10599 105 aaKnown RBP13.47□□□□□ -0.25
MRPL55-212ENST00000366739 TOP1P11387 765 aaKnown RBP13.47□□□□□ -0.25
MRPL55-212ENST00000366739 KCNJ6P48051 423 aa13.47□□□□□ -0.25
MRPL55-212ENST00000366739 WDR5P61964 334 aaKnown RBP13.47□□□□□ -0.25
MRPL55-212ENST00000366739 GPNMBQ14956 572 aa13.47□□□□□ -0.25
MRPL55-212ENST00000366739 PTGISQ16647 500 aa13.47□□□□□ -0.25
MRPL55-212ENST00000366739 RRP12Q5JTH9 1297 aaKnown RBP13.47□□□□□ -0.25
MRPL55-212ENST00000366739 TMEM31Q5JXX7 168 aa13.47□□□□□ -0.25
MRPL55-212ENST00000366739 GDPD5Q8WTR4 605 aa13.47□□□□□ -0.25
MRPL55-212ENST00000366739 CTAGE1Q96RT6 745 aa13.47□□□□□ -0.25
MRPL55-212ENST00000366739 TOMM22Q9NS69 142 aa13.47□□□□□ -0.25
MRPL55-212ENST00000366739 HCN4Q9Y3Q4 1203 aa13.47□□□□□ -0.25
MRPL55-212ENST00000366739 COL4A4P53420 1690 aaPredicted RBP13.47□□□□□ -0.25
MRPL55-212ENST00000366739 TET1Q8NFU7 2136 aa13.46□□□□□ -0.25
MRPL55-212ENST00000366739 FAM86C2PA6NEL3 165 aa13.46□□□□□ -0.25
MRPL55-212ENST00000366739 PDHBP11177 359 aa13.46□□□□□ -0.25
MRPL55-212ENST00000366739 DEFB103AP81534 67 aa13.46□□□□□ -0.25
MRPL55-212ENST00000366739 GDF6Q6KF10 455 aaPredicted RBP13.46□□□□□ -0.25
MRPL55-212ENST00000366739 DNERQ8NFT8 737 aa13.46□□□□□ -0.25
MRPL55-212ENST00000366739 AFAP1L1Q8TED9 768 aa13.46□□□□□ -0.25
MRPL55-212ENST00000366739 AFG1LQ8WV93 481 aa13.46□□□□□ -0.25
MRPL55-212ENST00000366739 MPHOSPH6Q99547 160 aaKnown RBP13.46□□□□□ -0.25
MRPL55-212ENST00000366739 C11orf16Q9NQ32 467 aa13.46□□□□□ -0.25
MRPL55-212ENST00000366739 WDR19Q8NEZ3 1342 aa13.45□□□□□ -0.26
MRPL55-212ENST00000366739 MX1P20591 662 aa13.45□□□□□ -0.26
MRPL55-212ENST00000366739 ZNF543Q08ER8 600 aa13.45□□□□□ -0.26
MRPL55-212ENST00000366739 TCTN1Q2MV58 587 aa13.45□□□□□ -0.26
MRPL55-212ENST00000366739 CCDC62Q6P9F0 684 aa13.45□□□□□ -0.26
MRPL55-212ENST00000366739 CAGE1Q8TC20 777 aa13.45□□□□□ -0.26
MRPL55-212ENST00000366739 DHX38Q92620 1227 aaKnown RBP13.45□□□□□ -0.26
MRPL55-212ENST00000366739 ZBED2Q9BTP6 218 aa13.45□□□□□ -0.26
MRPL55-212ENST00000366739 CD320Q9NPF0 282 aa13.45□□□□□ -0.26
MRPL55-212ENST00000366739 MTUS1Q9ULD2 1270 aa13.45□□□□□ -0.26
MRPL55-212ENST00000366739 ARIH1Q9Y4X5 557 aaPredicted RBP13.45□□□□□ -0.26
MRPL55-212ENST00000366739 PTPRSQ13332 1948 aa13.45□□□□□ -0.26
MRPL55-212ENST00000366739 NBNO60934 754 aa13.44□□□□□ -0.26
MRPL55-212ENST00000366739 MMP3P08254 477 aa13.44□□□□□ -0.26
MRPL55-212ENST00000366739 SELPP16109 830 aa13.44□□□□□ -0.26
MRPL55-212ENST00000366739 ALX1Q15699 326 aa13.44□□□□□ -0.26
MRPL55-212ENST00000366739 USH1GQ495M9 461 aa13.44□□□□□ -0.26
MRPL55-212ENST00000366739 SEPT14Q6ZU15 432 aa13.44□□□□□ -0.26
MRPL55-212ENST00000366739 LRRC8DQ7L1W4 858 aa13.44□□□□□ -0.26
MRPL55-212ENST00000366739 SESTD1Q86VW0 696 aa13.44□□□□□ -0.26
MRPL55-212ENST00000366739 CCDC155Q8N6L0 562 aa13.44□□□□□ -0.26
MRPL55-212ENST00000366739 KAT2BQ92831 832 aa13.44□□□□□ -0.26
MRPL55-212ENST00000366739 TCP11L1Q9NUJ3 509 aa13.44□□□□□ -0.26
MRPL55-212ENST00000366739 PNMA2Q9UL42 364 aa13.44□□□□□ -0.26
MRPL55-212ENST00000366739 GPR37L1O60883 481 aa13.43□□□□□ -0.26
MRPL55-212ENST00000366739 GH1P01241 217 aa13.43□□□□□ -0.26
MRPL55-212ENST00000366739 FGAP02671 866 aa13.43□□□□□ -0.26
MRPL55-212ENST00000366739 CXCL10P02778 98 aa13.43□□□□□ -0.26
MRPL55-212ENST00000366739 ARHGAP1Q07960 439 aa13.43□□□□□ -0.26
MRPL55-212ENST00000366739 LY6KQ17RY6 165 aa13.43□□□□□ -0.26
MRPL55-212ENST00000366739 CNKSR3Q6P9H4 555 aa13.43□□□□□ -0.26
MRPL55-212ENST00000366739 CHST3Q7LGC8 479 aa13.43□□□□□ -0.26
MRPL55-212ENST00000366739 TBC1D5Q92609 795 aa13.43□□□□□ -0.26
MRPL55-212ENST00000366739 CPVLQ9H3G5 476 aa13.43□□□□□ -0.26
MRPL55-212ENST00000366739 SUGCTQ9HAC7 445 aa13.43□□□□□ -0.26
MRPL55-212ENST00000366739 LMCD1Q9NZU5 365 aa13.43□□□□□ -0.26
MRPL55-212ENST00000366739 PCDHB15Q9Y5E8 787 aa13.43□□□□□ -0.26
MRPL55-212ENST00000366739 SALL3Q9BXA9 1300 aa13.42□□□□□ -0.26
MRPL55-212ENST00000366739 LINC01553A4QN01 128 aa13.42□□□□□ -0.26
MRPL55-212ENST00000366739 B4DLN1 442 aa13.42□□□□□ -0.26
MRPL55-212ENST00000366739 GJB5O95377 273 aa13.42□□□□□ -0.26
MRPL55-212ENST00000366739 GOLGA8HP0CJ92 632 aa13.42□□□□□ -0.26
MRPL55-212ENST00000366739 SNHG28P0DPA3 235 aa13.42□□□□□ -0.26
MRPL55-212ENST00000366739 CKBP12277 381 aa13.42□□□□□ -0.26
MRPL55-212ENST00000366739 MRPL12P52815 198 aaKnown RBP13.42□□□□□ -0.26
MRPL55-212ENST00000366739 HAND2P61296 217 aa13.42□□□□□ -0.26
MRPL55-212ENST00000366739 ERVK-21P61565 698 aa13.42□□□□□ -0.26
MRPL55-212ENST00000366739 RBL2Q08999 1139 aa13.42□□□□□ -0.26
MRPL55-212ENST00000366739 FAM117BQ6P1L5 589 aa13.42□□□□□ -0.26
MRPL55-212ENST00000366739 RGS22Q8NE09 1264 aa13.42□□□□□ -0.26
MRPL55-212ENST00000366739 FAM227BQ96M60 508 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms