RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 FAM184BQ9ULE4 1060 aa13.04□□□□□ -0.32
CSNK1E-202ENST00000366216 SLC4A7Q9Y6M7 1214 aa13.04□□□□□ -0.32
CSNK1E-202ENST00000366216 UMODL1Q5DID0 1318 aa13.04□□□□□ -0.32
CSNK1E-202ENST00000366216 DDX11L8A8MPP1 907 aa13.03□□□□□ -0.32
CSNK1E-202ENST00000366216 USP17L12C9JPN9 530 aa13.03□□□□□ -0.32
CSNK1E-202ENST00000366216 USP17L21D6R901 530 aa13.03□□□□□ -0.32
CSNK1E-202ENST00000366216 RBAK-RBAKDNI3L0D1 243 aa13.03□□□□□ -0.32
CSNK1E-202ENST00000366216 CTAGE5O15320 804 aa13.03□□□□□ -0.32
CSNK1E-202ENST00000366216 ORC4O43929 436 aa13.03□□□□□ -0.32
CSNK1E-202ENST00000366216 DUSP11O75319 330 aaKnown RBP13.03□□□□□ -0.32
CSNK1E-202ENST00000366216 CD4P01730 458 aa13.03□□□□□ -0.32
CSNK1E-202ENST00000366216 SLC3A2P08195 630 aaKnown RBP13.03□□□□□ -0.32
CSNK1E-202ENST00000366216 C6orf222P0C671 652 aaPredicted RBP13.03□□□□□ -0.32
CSNK1E-202ENST00000366216 PDCP20941 246 aa13.03□□□□□ -0.32
CSNK1E-202ENST00000366216 PTMSP20962 102 aa13.03□□□□□ -0.32
CSNK1E-202ENST00000366216 SCRN1Q12765 414 aa13.03□□□□□ -0.32
CSNK1E-202ENST00000366216 SGMS1Q86VZ5 419 aa13.03□□□□□ -0.32
CSNK1E-202ENST00000366216 SMARCC2Q8TAQ2 1214 aa13.03□□□□□ -0.32
CSNK1E-202ENST00000366216 IGDCC4Q8TDY8 1250 aa13.03□□□□□ -0.32
CSNK1E-202ENST00000366216 HLA-CQ95604 372 aa13.03□□□□□ -0.32
CSNK1E-202ENST00000366216 FGD4Q96M96 766 aa13.03□□□□□ -0.32
CSNK1E-202ENST00000366216 ZSWIM5Q9P217 1185 aa13.03□□□□□ -0.32
CSNK1E-202ENST00000366216 PRR33A8MZF0 331 aa13.02□□□□□ -0.33
CSNK1E-202ENST00000366216 RFXAPO00287 272 aa13.02□□□□□ -0.33
CSNK1E-202ENST00000366216 MPHOSPH10O00566 681 aaKnown RBP13.02□□□□□ -0.33
CSNK1E-202ENST00000366216 STX6O43752 255 aa13.02□□□□□ -0.33
CSNK1E-202ENST00000366216 KDM4AO75164 1064 aa13.02□□□□□ -0.33
CSNK1E-202ENST00000366216 BAG4O95429 457 aaKnown RBP13.02□□□□□ -0.33
CSNK1E-202ENST00000366216 AKR1B1P15121 316 aa13.02□□□□□ -0.33
CSNK1E-202ENST00000366216 SYT1P21579 422 aa13.02□□□□□ -0.33
CSNK1E-202ENST00000366216 PTGS1P23219 599 aa13.02□□□□□ -0.33
CSNK1E-202ENST00000366216 HMGN5P82970 282 aaKnown RBP13.02□□□□□ -0.33
CSNK1E-202ENST00000366216 STK3Q13188 491 aa13.02□□□□□ -0.33
CSNK1E-202ENST00000366216 SART3Q15020 963 aaKnown RBP13.02□□□□□ -0.33
CSNK1E-202ENST00000366216 TMTC2Q8N394 836 aa13.02□□□□□ -0.33
CSNK1E-202ENST00000366216 MSL3Q8N5Y2 521 aaKnown RBP13.02□□□□□ -0.33
CSNK1E-202ENST00000366216 ESR2Q92731 530 aa13.02□□□□□ -0.33
CSNK1E-202ENST00000366216 DYNLL2Q96FJ2 89 aa13.02□□□□□ -0.33
CSNK1E-202ENST00000366216 HIPK3Q9H422 1215 aa13.02□□□□□ -0.33
CSNK1E-202ENST00000366216 ZNF214Q9UL59 606 aaPredicted RBP13.02□□□□□ -0.33
CSNK1E-202ENST00000366216 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.02□□□□□ -0.33
CSNK1E-202ENST00000366216 CFAP54Q96N23 3096 aa13.02□□□□□ -0.33
CSNK1E-202ENST00000366216 KLF18A0A0U1RQI7 1052 aa13.01□□□□□ -0.33
CSNK1E-202ENST00000366216 EPOPA6NHQ4 379 aa13.01□□□□□ -0.33
CSNK1E-202ENST00000366216 DHX16O60231 1041 aaKnown RBP13.01□□□□□ -0.33
CSNK1E-202ENST00000366216 C12orf60Q5U649 245 aa13.01□□□□□ -0.33
CSNK1E-202ENST00000366216 KRT40Q6A162 431 aa13.01□□□□□ -0.33
CSNK1E-202ENST00000366216 RIOX2Q8IUF8 465 aa13.01□□□□□ -0.33
CSNK1E-202ENST00000366216 AMOTL1Q8IY63 956 aa13.01□□□□□ -0.33
CSNK1E-202ENST00000366216 UPF3AQ9H1J1 476 aaKnown RBP13.01□□□□□ -0.33
CSNK1E-202ENST00000366216 LY9Q9HBG7 655 aa13.01□□□□□ -0.33
CSNK1E-202ENST00000366216 CD320Q9NPF0 282 aa13.01□□□□□ -0.33
CSNK1E-202ENST00000366216 INCENPQ9NQS7 918 aa13.01□□□□□ -0.33
CSNK1E-202ENST00000366216 GPHNQ9NQX3 736 aaPredicted RBP13.01□□□□□ -0.33
CSNK1E-202ENST00000366216 MCM9Q9NXL9 1143 aa13.01□□□□□ -0.33
CSNK1E-202ENST00000366216 ZHX1Q9UKY1 873 aaPredicted RBP13.01□□□□□ -0.33
CSNK1E-202ENST00000366216 BRPF3Q9ULD4 1205 aa13.01□□□□□ -0.33
CSNK1E-202ENST00000366216 RIPK3Q9Y572 518 aa13.01□□□□□ -0.33
CSNK1E-202ENST00000366216 GREB1LQ9C091 1923 aaPredicted RBP13.01□□□□□ -0.33
CSNK1E-202ENST00000366216 MYO7AQ13402 2215 aa13.01□□□□□ -0.33
CSNK1E-202ENST00000366216 USP34Q70CQ2 3546 aa13□□□□□ -0.33
CSNK1E-202ENST00000366216 C5orf42Q9H799 3197 aa13□□□□□ -0.33
CSNK1E-202ENST00000366216 SPTBN4Q9H254 2564 aa13□□□□□ -0.33
CSNK1E-202ENST00000366216 GRIN2DO15399 1336 aa13□□□□□ -0.33
CSNK1E-202ENST00000366216 ERICH2A1L162 156 aa13□□□□□ -0.33
CSNK1E-202ENST00000366216 GOLGA6L22H0YM25 854 aa13□□□□□ -0.33
CSNK1E-202ENST00000366216 IFIT3O14879 490 aaKnown RBP13□□□□□ -0.33
CSNK1E-202ENST00000366216 ARHGEF15O94989 841 aa13□□□□□ -0.33
CSNK1E-202ENST00000366216 CA3P07451 260 aa13□□□□□ -0.33
CSNK1E-202ENST00000366216 ZSCAN22P10073 491 aaPredicted RBP13□□□□□ -0.33
CSNK1E-202ENST00000366216 ATP2A2P16615 1042 aaKnown RBP13□□□□□ -0.33
CSNK1E-202ENST00000366216 RCAN1P53805 252 aa13□□□□□ -0.33
CSNK1E-202ENST00000366216 PDE4BQ07343 736 aa13□□□□□ -0.33
CSNK1E-202ENST00000366216 TMEM67Q5HYA8 995 aa13□□□□□ -0.33
CSNK1E-202ENST00000366216 RRP12Q5JTH9 1297 aaKnown RBP13□□□□□ -0.33
CSNK1E-202ENST00000366216 GNASQ5JWF2 1037 aa13□□□□□ -0.33
CSNK1E-202ENST00000366216 MAMDC4Q6UXC1 1216 aa13□□□□□ -0.33
CSNK1E-202ENST00000366216 NSUN7Q8NE18 718 aaKnown RBP13□□□□□ -0.33
CSNK1E-202ENST00000366216 VCPKMTQ9H867 229 aa13□□□□□ -0.33
CSNK1E-202ENST00000366216 CERS4Q9HA82 394 aa13□□□□□ -0.33
CSNK1E-202ENST00000366216 SPC25Q9HBM1 224 aa13□□□□□ -0.33
CSNK1E-202ENST00000366216 TOMM22Q9NS69 142 aa13□□□□□ -0.33
CSNK1E-202ENST00000366216 TMX2Q9Y320 296 aa13□□□□□ -0.33
CSNK1E-202ENST00000366216 KIF3AQ9Y496 699 aa13□□□□□ -0.33
CSNK1E-202ENST00000366216 LCTP09848 1927 aa13□□□□□ -0.33
CSNK1E-202ENST00000366216 NLRC5Q86WI3 1866 aa12.99□□□□□ -0.33
CSNK1E-202ENST00000366216 ZDBF2Q9HCK1 2354 aa12.99□□□□□ -0.33
CSNK1E-202ENST00000366216 NID2Q14112 1375 aa12.99□□□□□ -0.33
CSNK1E-202ENST00000366216 ASTN1O14525 1302 aa12.99□□□□□ -0.33
CSNK1E-202ENST00000366216 DNAJC25-GNG10A0A024R161 153 aa12.99□□□□□ -0.33
CSNK1E-202ENST00000366216 CYP2D7A0A087X1C5 515 aa12.99□□□□□ -0.33
CSNK1E-202ENST00000366216 GOLGA8BA8MQT2 603 aa12.99□□□□□ -0.33
CSNK1E-202ENST00000366216 ZBBXA8MT70 800 aa12.99□□□□□ -0.33
CSNK1E-202ENST00000366216 CTDNEP1O95476 244 aa12.99□□□□□ -0.33
CSNK1E-202ENST00000366216 POLR3DP05423 398 aaPredicted RBP12.99□□□□□ -0.33
CSNK1E-202ENST00000366216 COPB2P35606 906 aa12.99□□□□□ -0.33
CSNK1E-202ENST00000366216 STAT3P40763 770 aa12.99□□□□□ -0.33
CSNK1E-202ENST00000366216 CCL23P55773 120 aa12.99□□□□□ -0.33
CSNK1E-202ENST00000366216 GJA9P57773 515 aa12.99□□□□□ -0.33
CSNK1E-202ENST00000366216 CCT2P78371 535 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms