RNA–Protein interactions for RNA: ENST00000364033.1

RNU1-42P-201, Transcript of RNA, U1 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU1-42P, Length 160 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-42P-201ENST00000364033 KCNA5P22460 613 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 HOXA13P31271 388 aaPredicted RBP1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 SSTR3P32745 418 aaPredicted RBP1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 GTF2F1P35269 517 aaKnown RBP eCLIP1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 ALDH5A1P51649 535 aaPredicted RBP1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 PURAQ00577 322 aaKnown RBP1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 FOXK2Q01167 660 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 SP2Q02086 613 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 TAP1Q03518 808 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 PDE4DQ08499 809 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 NMIQ13287 307 aaPredicted RBP1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 GRB10Q13322 594 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 COL9A2Q14055 689 aaPredicted RBP1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 HIC1Q14526 733 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 GPNMBQ14956 572 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 NFKBIBQ15653 356 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 RAB30Q15771 203 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 PTGISQ16647 500 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 DUSP28Q4G0W2 176 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 MCMDC2Q4G0Z9 681 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 GLIPR1L2Q4G1C9 344 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 ZMYM1Q5SVZ6 1142 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 ZNF618Q5T7W0 954 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 UTP14CQ5TAP6 766 aaKnown RBP1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 RASIP1Q5U651 963 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 C1orf53Q5VUE5 145 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 ARHGEF16Q5VV41 709 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 CASC1Q6TDU7 716 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 CWC27Q6UX04 472 aaKnown RBP1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 CYB5R4Q7L1T6 521 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 TRMT1LQ7Z2T5 733 aaKnown RBP1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 ZNF589Q86UQ0 364 aaPredicted RBP1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 FAM160B2Q86V87 743 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 FCHSD1Q86WN1 690 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 SKAP1Q86WV1 359 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 HOMER1Q86YM7 354 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 CERS3Q8IU89 383 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 TBC1D10CQ8IV04 446 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 HERC6Q8IVU3 1022 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 DHX37Q8IY37 1157 aaKnown RBP1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 RPUSD2Q8IZ73 545 aaKnown RBP1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 ADGRF4Q8IZF3 695 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 CMTR1Q8N1G2 835 aaKnown RBP1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 STAG2Q8N3U4 1231 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 CCDC82Q8N4S0 544 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 FAM133AQ8N9E0 248 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 SLC43A3Q8NBI5 491 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 GMCL1P1Q8NEA9 526 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 PI4K2BQ8TCG2 481 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 SYTL5Q8TDW5 730 aaPredicted RBP1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 GDPD5Q8WTR4 605 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 ATXN2LQ8WWM7 1075 aaKnown RBP1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 DHX38Q92620 1227 aaKnown RBP1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 SYMPKQ92797 1274 aaKnown RBP1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 WNT8BQ93098 351 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 HLA-CQ95604 372 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 GPATCH3Q96I76 525 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 GMCL1Q96IK5 515 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 TOX2Q96NM4 488 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 RMDN3Q96TC7 470 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 C17orf80Q9BSJ5 609 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 MTG1Q9BT17 334 aaPredicted RBP1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 LRFN3Q9BTN0 628 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 APOL5Q9BWW9 433 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 UPF3AQ9H1J1 476 aaKnown RBP1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 SUGCTQ9HAC7 445 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 ZNF287Q9HBT7 754 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 SENP2Q9HC62 589 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 PKD2L1Q9P0L9 805 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 ZSWIM5Q9P217 1185 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 COL20A1Q9P218 1284 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 THEGQ9P2T0 379 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 HDAC6Q9UBN7 1215 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 FBXO40Q9UH90 709 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 DDX52Q9Y2R4 599 aaKnown RBP eCLIP1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 MTCH2Q9Y6C9 303 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 GPR179Q6PRD1 2367 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 COL2A1P02458 1487 aaPredicted RBP1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 FLNBO75369 2602 aaKnown RBP1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 DOCK1Q14185 1865 aa1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 MYO5AQ9Y4I1 1855 aaKnown RBP1.8□□□□□ -2.12
RNU1-42P-201ENST00000364033 CACNA1FO60840 1977 aa1.79□□□□□ -2.12
RNU1-42P-201ENST00000364033 TCF20Q9UGU0 1960 aaKnown RBP1.79□□□□□ -2.12
RNU1-42P-201ENST00000364033 MUC6Q6W4X9 2439 aa1.79□□□□□ -2.12
RNU1-42P-201ENST00000364033 SPTBN5Q9NRC6 3674 aaKnown RBP1.79□□□□□ -2.12
RNU1-42P-201ENST00000364033 RBM47A0AV96 593 aaKnown RBP1.79□□□□□ -2.12
RNU1-42P-201ENST00000364033 GOLGA6L3A6NEY3 463 aa1.79□□□□□ -2.12
RNU1-42P-201ENST00000364033 RSPH10B2B2RC85 870 aa1.79□□□□□ -2.12
RNU1-42P-201ENST00000364033 KLRF2D3W0D1 207 aa1.79□□□□□ -2.12
RNU1-42P-201ENST00000364033 ATP2A1O14983 1001 aa1.79□□□□□ -2.12
RNU1-42P-201ENST00000364033 PER2O15055 1255 aa1.79□□□□□ -2.12
RNU1-42P-201ENST00000364033 LINC01565O15544 149 aa1.79□□□□□ -2.12
RNU1-42P-201ENST00000364033 TREHO43280 583 aa1.79□□□□□ -2.12
RNU1-42P-201ENST00000364033 GTPBP6O43824 516 aaPredicted RBP1.79□□□□□ -2.12
RNU1-42P-201ENST00000364033 LPXNO60711 386 aa1.79□□□□□ -2.12
RNU1-42P-201ENST00000364033 PPP1R11O60927 126 aaPredicted RBP1.79□□□□□ -2.12
RNU1-42P-201ENST00000364033 DTNBO60941 627 aa1.79□□□□□ -2.12
RNU1-42P-201ENST00000364033 IGSF3O75054 1194 aa1.79□□□□□ -2.12
RNU1-42P-201ENST00000364033 CABYRO75952 493 aa1.79□□□□□ -2.12
RNU1-42P-201ENST00000364033 GGPS1O95749 300 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms