RNA–Protein interactions for RNA: ENST00000354473.4

VPS72-201, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 3

Gene VPS72, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-201ENST00000354473 PTGS1P23219 599 aa21.73■■□□□ 1.07
VPS72-201ENST00000354473 METAP2P50579 478 aaKnown RBP eCLIP21.73■■□□□ 1.07
VPS72-201ENST00000354473 GJA9P57773 515 aa21.73■■□□□ 1.07
VPS72-201ENST00000354473 IRX5P78411 483 aaPredicted RBP21.73■■□□□ 1.07
VPS72-201ENST00000354473 TLK2Q86UE8 772 aa21.73■■□□□ 1.07
VPS72-201ENST00000354473 AGXT2Q9BYV1 514 aa21.73■■□□□ 1.07
VPS72-201ENST00000354473 UPF3BQ9BZI7 483 aaKnown RBP21.73■■□□□ 1.07
VPS72-201ENST00000354473 TM6SF1Q9BZW5 370 aa21.73■■□□□ 1.07
VPS72-201ENST00000354473 PXMP2Q9NR77 195 aa21.73■■□□□ 1.07
VPS72-201ENST00000354473 GNEQ9Y223 722 aaKnown RBP21.73■■□□□ 1.07
VPS72-201ENST00000354473 CST5P28325 142 aaPredicted RBP21.72■■□□□ 1.07
VPS72-201ENST00000354473 CDC27P30260 824 aa21.72■■□□□ 1.07
VPS72-201ENST00000354473 FUT2Q10981 343 aa21.72■■□□□ 1.07
VPS72-201ENST00000354473 TMEM63BQ5T3F8 832 aa21.72■■□□□ 1.07
VPS72-201ENST00000354473 KLHDC9Q8NEP7 349 aa21.72■■□□□ 1.07
VPS72-201ENST00000354473 IWS1Q96ST2 819 aa21.72■■□□□ 1.07
VPS72-201ENST00000354473 TSEN34Q9BSV6 310 aaKnown RBP21.72■■□□□ 1.07
VPS72-201ENST00000354473 WDR11Q9BZH6 1224 aa21.72■■□□□ 1.07
VPS72-201ENST00000354473 FAM217BQ9NTX9 383 aaPredicted RBP21.72■■□□□ 1.07
VPS72-201ENST00000354473 KIAA1217Q5T5P2 1943 aa21.71■■□□□ 1.07
VPS72-201ENST00000354473 A0A1W2PQ45 241 aaPredicted RBP21.71■■□□□ 1.07
VPS72-201ENST00000354473 A0A1W2PQY0 241 aa21.71■■□□□ 1.07
VPS72-201ENST00000354473 EIF5BO60841 1220 aaKnown RBP21.71■■□□□ 1.07
VPS72-201ENST00000354473 KCNA10Q16322 511 aa21.71■■□□□ 1.07
VPS72-201ENST00000354473 CCSAPQ6IQ19 270 aaPredicted RBP21.71■■□□□ 1.07
VPS72-201ENST00000354473 HEATR3Q7Z4Q2 680 aa21.71■■□□□ 1.07
VPS72-201ENST00000354473 FCHSD1Q86WN1 690 aa21.71■■□□□ 1.07
VPS72-201ENST00000354473 AP5M1Q9H0R1 490 aa21.71■■□□□ 1.07
VPS72-201ENST00000354473 NID2Q14112 1375 aa21.7■■□□□ 1.06
VPS72-201ENST00000354473 RBM47A0AV96 593 aaKnown RBP21.7■■□□□ 1.06
VPS72-201ENST00000354473 CTAGE5O15320 804 aa21.7■■□□□ 1.06
VPS72-201ENST00000354473 ACLYP53396 1101 aa21.7■■□□□ 1.06
VPS72-201ENST00000354473 TOB2Q14106 344 aaPredicted RBP21.7■■□□□ 1.06
VPS72-201ENST00000354473 PPP2R5BQ15173 497 aa21.7■■□□□ 1.06
VPS72-201ENST00000354473 STXBP2Q15833 593 aa21.7■■□□□ 1.06
VPS72-201ENST00000354473 DUSP28Q4G0W2 176 aa21.7■■□□□ 1.06
VPS72-201ENST00000354473 GNASQ5JWF2 1037 aa21.7■■□□□ 1.06
VPS72-201ENST00000354473 SCFD2Q8WU76 684 aa21.7■■□□□ 1.06
VPS72-201ENST00000354473 GPKOWQ92917 476 aaPredicted RBP eCLIP21.7■■□□□ 1.06
VPS72-201ENST00000354473 CCDC196A0A1B0GTZ2 297 aa21.69■■□□□ 1.06
VPS72-201ENST00000354473 MOXD2PA6NHM9 499 aa21.69■■□□□ 1.06
VPS72-201ENST00000354473 DYNC1LI2O43237 492 aaPredicted RBP21.69■■□□□ 1.06
VPS72-201ENST00000354473 NR3C2P08235 984 aa21.69■■□□□ 1.06
VPS72-201ENST00000354473 ADD1P35611 737 aaKnown RBP21.69■■□□□ 1.06
VPS72-201ENST00000354473 RTP1P59025 263 aa21.69■■□□□ 1.06
VPS72-201ENST00000354473 NKX3-2P78367 333 aa21.69■■□□□ 1.06
VPS72-201ENST00000354473 BEX3Q00994 111 aa21.69■■□□□ 1.06
VPS72-201ENST00000354473 SLC39A5Q6ZMH5 540 aa21.69■■□□□ 1.06
VPS72-201ENST00000354473 PCSK9Q8NBP7 692 aaKnown RBP21.69■■□□□ 1.06
VPS72-201ENST00000354473 SMARCC2Q8TAQ2 1214 aa21.69■■□□□ 1.06
VPS72-201ENST00000354473 CUL5Q93034 780 aa21.69■■□□□ 1.06
VPS72-201ENST00000354473 PDCD2LQ9BRP1 358 aa21.69■■□□□ 1.06
VPS72-201ENST00000354473 Q9Y3F1 56 aa21.69■■□□□ 1.06
VPS72-201ENST00000354473 SEC24BO95487 1268 aa21.68■■□□□ 1.06
VPS72-201ENST00000354473 ASGR1P07306 291 aa21.68■■□□□ 1.06
VPS72-201ENST00000354473 ANAPC15P60006 121 aa21.68■■□□□ 1.06
VPS72-201ENST00000354473 PGM5Q15124 567 aa21.68■■□□□ 1.06
VPS72-201ENST00000354473 FSCN1Q16658 493 aaKnown RBP21.68■■□□□ 1.06
VPS72-201ENST00000354473 WWC2Q6AWC2 1192 aa21.68■■□□□ 1.06
VPS72-201ENST00000354473 USP17L6PQ6QN14 398 aa21.68■■□□□ 1.06
VPS72-201ENST00000354473 SEPT14Q6ZU15 432 aa21.68■■□□□ 1.06
VPS72-201ENST00000354473 IL31RAQ8NI17 732 aa21.68■■□□□ 1.06
VPS72-201ENST00000354473 PDRG1Q9NUG6 133 aa21.68■■□□□ 1.06
VPS72-201ENST00000354473 ZMYND8Q9ULU4 1186 aaPredicted RBP21.68■■□□□ 1.06
VPS72-201ENST00000354473 ATP11BQ9Y2G3 1177 aa21.68■■□□□ 1.06
VPS72-201ENST00000354473 V9GY48 417 aaPredicted RBP21.68■■□□□ 1.06
VPS72-201ENST00000354473 TXNP10599 105 aaKnown RBP21.67■■□□□ 1.06
VPS72-201ENST00000354473 MYCLP12524 364 aaPredicted RBP21.67■■□□□ 1.06
VPS72-201ENST00000354473 EVCP57679 992 aa21.67■■□□□ 1.06
VPS72-201ENST00000354473 TTLL4Q14679 1199 aa21.67■■□□□ 1.06
VPS72-201ENST00000354473 SNX17Q15036 470 aa21.67■■□□□ 1.06
VPS72-201ENST00000354473 PSTPIP2Q9H939 334 aa21.67■■□□□ 1.06
VPS72-201ENST00000354473 STARD7Q9NQZ5 370 aa21.67■■□□□ 1.06
VPS72-201ENST00000354473 PIK3CDO00329 1044 aa21.66■■□□□ 1.06
VPS72-201ENST00000354473 MEIS2O14770 477 aa21.66■■□□□ 1.06
VPS72-201ENST00000354473 NKRFO15226 690 aaKnown RBP eCLIP21.66■■□□□ 1.06
VPS72-201ENST00000354473 EIF3JO75822 258 aaKnown RBP21.66■■□□□ 1.06
VPS72-201ENST00000354473 ARIH2O95376 493 aa21.66■■□□□ 1.06
VPS72-201ENST00000354473 SYN1P17600 705 aa21.66■■□□□ 1.06
VPS72-201ENST00000354473 PDIA3P30101 505 aaKnown RBP21.66■■□□□ 1.06
VPS72-201ENST00000354473 TRIM60Q495X7 471 aa21.66■■□□□ 1.06
VPS72-201ENST00000354473 OR6J1Q8NGC5 347 aa21.66■■□□□ 1.06
VPS72-201ENST00000354473 DNAH12Q6ZR08 3092 aa21.65■■□□□ 1.06
VPS72-201ENST00000354473 CCND2P30279 289 aa21.65■■□□□ 1.06
VPS72-201ENST00000354473 NAPAP54920 295 aa21.65■■□□□ 1.06
VPS72-201ENST00000354473 COPS5Q92905 334 aa21.65■■□□□ 1.06
VPS72-201ENST00000354473 GLT1D1Q96MS3 346 aa21.65■■□□□ 1.06
VPS72-201ENST00000354473 LARP6Q9BRS8 491 aaKnown RBP21.65■■□□□ 1.06
VPS72-201ENST00000354473 NCOA5Q9HCD5 579 aaKnown RBP21.65■■□□□ 1.06
VPS72-201ENST00000354473 FRMPD4Q14CM0 1322 aa21.65■■□□□ 1.06
VPS72-201ENST00000354473 ZEB2O60315 1214 aa21.64■■□□□ 1.05
VPS72-201ENST00000354473 CCT2P78371 535 aaKnown RBP21.64■■□□□ 1.05
VPS72-201ENST00000354473 UBE2SQ16763 222 aa21.64■■□□□ 1.05
VPS72-201ENST00000354473 C8orf34Q49A92 452 aa21.64■■□□□ 1.05
VPS72-201ENST00000354473 C1orf53Q5VUE5 145 aa21.64■■□□□ 1.05
VPS72-201ENST00000354473 PPP1R18Q6NYC8 613 aa21.64■■□□□ 1.05
VPS72-201ENST00000354473 CCDC62Q6P9F0 684 aa21.64■■□□□ 1.05
VPS72-201ENST00000354473 CXCL17Q6UXB2 119 aa21.64■■□□□ 1.05
VPS72-201ENST00000354473 VSIG10LQ86VR7 867 aa21.64■■□□□ 1.05
VPS72-201ENST00000354473 VTI1AQ96AJ9 217 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms