RNA–Protein interactions for RNA: ENST00000346403.10

SNRPN-201, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNRPN, Length 1,304 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-201ENST00000346403 CPT1AP50416 773 aa18.33■□□□□ 0.53
SNRPN-201ENST00000346403 TMEM63BQ5T3F8 832 aa18.33■□□□□ 0.53
SNRPN-201ENST00000346403 ARHGEF16Q5VV41 709 aa18.33■□□□□ 0.53
SNRPN-201ENST00000346403 ZNF654Q8IZM8 581 aa18.33■□□□□ 0.53
SNRPN-201ENST00000346403 LRCH3Q96II8 777 aa18.33■□□□□ 0.53
SNRPN-201ENST00000346403 TAAR1Q96RJ0 339 aa18.33■□□□□ 0.53
SNRPN-201ENST00000346403 PIGSQ96S52 555 aa18.33■□□□□ 0.53
SNRPN-201ENST00000346403 POLR3EQ9NVU0 708 aa18.33■□□□□ 0.53
SNRPN-201ENST00000346403 PNMA6FA0A0J9YX94 578 aa18.32■□□□□ 0.52
SNRPN-201ENST00000346403 PPP1R11O60927 126 aaPredicted RBP18.32■□□□□ 0.52
SNRPN-201ENST00000346403 TXNP10599 105 aaKnown RBP18.32■□□□□ 0.52
SNRPN-201ENST00000346403 PTGS1P23219 599 aa18.32■□□□□ 0.52
SNRPN-201ENST00000346403 TTLL4Q14679 1199 aa18.32■□□□□ 0.52
SNRPN-201ENST00000346403 STXBP2Q15833 593 aa18.32■□□□□ 0.52
SNRPN-201ENST00000346403 GPR153Q6NV75 609 aa18.32■□□□□ 0.52
SNRPN-201ENST00000346403 OR6J1Q8NGC5 347 aa18.32■□□□□ 0.52
SNRPN-201ENST00000346403 LZTS2Q9BRK4 669 aa18.32■□□□□ 0.52
SNRPN-201ENST00000346403 GPHNQ9NQX3 736 aaPredicted RBP18.32■□□□□ 0.52
SNRPN-201ENST00000346403 COL20A1Q9P218 1284 aa18.32■□□□□ 0.52
SNRPN-201ENST00000346403 SH2B2O14492 632 aaPredicted RBP18.31■□□□□ 0.52
SNRPN-201ENST00000346403 CALM1P0DP23 149 aa18.31■□□□□ 0.52
SNRPN-201ENST00000346403 CALM2P0DP24 149 aa18.31■□□□□ 0.52
SNRPN-201ENST00000346403 CALM3P0DP25 149 aa18.31■□□□□ 0.52
SNRPN-201ENST00000346403 LIFRP42702 1097 aa18.31■□□□□ 0.52
SNRPN-201ENST00000346403 GNAQP50148 359 aa18.31■□□□□ 0.52
SNRPN-201ENST00000346403 HSD17B4P51659 736 aa18.31■□□□□ 0.52
SNRPN-201ENST00000346403 GHRHRQ02643 423 aa18.31■□□□□ 0.52
SNRPN-201ENST00000346403 ITGA7Q13683 1181 aa18.31■□□□□ 0.52
SNRPN-201ENST00000346403 TBX21Q9UL17 535 aa18.31■□□□□ 0.52
SNRPN-201ENST00000346403 OPLAHO14841 1288 aa18.3■□□□□ 0.52
SNRPN-201ENST00000346403 CYTH3O43739 400 aa18.3■□□□□ 0.52
SNRPN-201ENST00000346403 EIF2AK2P19525 551 aaKnown RBP18.3■□□□□ 0.52
SNRPN-201ENST00000346403 SMARCA1P28370 1054 aa18.3■□□□□ 0.52
SNRPN-201ENST00000346403 FPGSQ05932 587 aa18.3■□□□□ 0.52
SNRPN-201ENST00000346403 SLC35G1Q2M3R5 365 aa18.3■□□□□ 0.52
SNRPN-201ENST00000346403 FAM126BQ8IXS8 530 aa18.3■□□□□ 0.52
SNRPN-201ENST00000346403 PXMP2Q9NR77 195 aa18.3■□□□□ 0.52
SNRPN-201ENST00000346403 LTBP2Q14767 1821 aa18.3■□□□□ 0.52
SNRPN-201ENST00000346403 GCOM1H8Y6P7 765 aaPredicted RBP18.29■□□□□ 0.52
SNRPN-201ENST00000346403 KPNA6O60684 536 aa18.29■□□□□ 0.52
SNRPN-201ENST00000346403 EIF3JO75822 258 aaKnown RBP18.29■□□□□ 0.52
SNRPN-201ENST00000346403 TIMP1P01033 207 aa18.29■□□□□ 0.52
SNRPN-201ENST00000346403 NR3C2P08235 984 aa18.29■□□□□ 0.52
SNRPN-201ENST00000346403 POLR2MP0CAP2 368 aa18.29■□□□□ 0.52
SNRPN-201ENST00000346403 ITGB8P26012 769 aa18.29■□□□□ 0.52
SNRPN-201ENST00000346403 SEPT14Q6ZU15 432 aa18.29■□□□□ 0.52
SNRPN-201ENST00000346403 SLC43A3Q8NBI5 491 aa18.29■□□□□ 0.52
SNRPN-201ENST00000346403 RRP36Q96EU6 259 aaKnown RBP18.29■□□□□ 0.52
SNRPN-201ENST00000346403 MYL10Q9BUA6 226 aa18.29■□□□□ 0.52
SNRPN-201ENST00000346403 SPZ1Q9BXG8 430 aa18.29■□□□□ 0.52
SNRPN-201ENST00000346403 SEC63Q9UGP8 760 aaKnown RBP18.29■□□□□ 0.52
SNRPN-201ENST00000346403 SLC12A7Q9Y666 1083 aa18.29■□□□□ 0.52
SNRPN-201ENST00000346403 MYL3P08590 195 aa18.28■□□□□ 0.52
SNRPN-201ENST00000346403 KRT32Q14532 448 aa18.28■□□□□ 0.52
SNRPN-201ENST00000346403 SHHQ15465 462 aa18.28■□□□□ 0.52
SNRPN-201ENST00000346403 SYNE3Q6ZMZ3 975 aa18.28■□□□□ 0.52
SNRPN-201ENST00000346403 PIBF1Q8WXW3 757 aa18.28■□□□□ 0.52
SNRPN-201ENST00000346403 NEK1Q96PY6 1258 aa18.28■□□□□ 0.52
SNRPN-201ENST00000346403 MTG1Q9BT17 334 aaPredicted RBP18.28■□□□□ 0.52
SNRPN-201ENST00000346403 MYH6P13533 1939 aa18.28■□□□□ 0.52
SNRPN-201ENST00000346403 A6NJR5 290 aa18.27■□□□□ 0.52
SNRPN-201ENST00000346403 GH1P01241 217 aa18.27■□□□□ 0.52
SNRPN-201ENST00000346403 CD4P01730 458 aa18.27■□□□□ 0.52
SNRPN-201ENST00000346403 HOXA13P31271 388 aaPredicted RBP18.27■□□□□ 0.52
SNRPN-201ENST00000346403 PSMC6P62333 389 aa18.27■□□□□ 0.52
SNRPN-201ENST00000346403 PURAQ00577 322 aaKnown RBP18.27■□□□□ 0.52
SNRPN-201ENST00000346403 MFSD5Q6N075 450 aa18.27■□□□□ 0.52
SNRPN-201ENST00000346403 CCDC62Q6P9F0 684 aa18.27■□□□□ 0.52
SNRPN-201ENST00000346403 COPS5Q92905 334 aa18.27■□□□□ 0.52
SNRPN-201ENST00000346403 PDCD2LQ9BRP1 358 aa18.27■□□□□ 0.52
SNRPN-201ENST00000346403 GRIN2DO15399 1336 aa18.27■□□□□ 0.52
SNRPN-201ENST00000346403 LAMA3Q16787 3333 aa18.27■□□□□ 0.52
SNRPN-201ENST00000346403 ARIH2O95376 493 aa18.26■□□□□ 0.51
SNRPN-201ENST00000346403 TSGA10IPQ3SY00 556 aa18.26■□□□□ 0.51
SNRPN-201ENST00000346403 C9orf50Q5SZB4 431 aa18.26■□□□□ 0.51
SNRPN-201ENST00000346403 TMEM199Q8N511 208 aa18.26■□□□□ 0.51
SNRPN-201ENST00000346403 LRRC2Q9BYS8 371 aa18.26■□□□□ 0.51
SNRPN-201ENST00000346403 MRVI1Q9Y6F6 885 aa18.26■□□□□ 0.51
SNRPN-201ENST00000346403 MYCLP12524 364 aaPredicted RBP18.25■□□□□ 0.51
SNRPN-201ENST00000346403 PPIGQ13427 754 aaKnown RBP eCLIP18.25■□□□□ 0.519e-11■□□□□ 10.2
SNRPN-201ENST00000346403 LY6KQ17RY6 165 aa18.25■□□□□ 0.51
SNRPN-201ENST00000346403 KCNV1Q6PIU1 500 aa18.25■□□□□ 0.51
SNRPN-201ENST00000346403 DHX32Q7L7V1 743 aaKnown RBP18.25■□□□□ 0.51
SNRPN-201ENST00000346403 VSIG10LQ86VR7 867 aa18.25■□□□□ 0.51
SNRPN-201ENST00000346403 SGMS1Q86VZ5 419 aa18.25■□□□□ 0.51
SNRPN-201ENST00000346403 FCHSD1Q86WN1 690 aa18.25■□□□□ 0.51
SNRPN-201ENST00000346403 PLEKHA8P1O95397 391 aa18.24■□□□□ 0.51
SNRPN-201ENST00000346403 HMGB1P09429 215 aaKnown RBP18.24■□□□□ 0.51
SNRPN-201ENST00000346403 SUPT20HL2P0C7V6 817 aa18.24■□□□□ 0.51
SNRPN-201ENST00000346403 RXRAP19793 462 aa18.24■□□□□ 0.51
SNRPN-201ENST00000346403 CCND2P30279 289 aa18.24■□□□□ 0.51
SNRPN-201ENST00000346403 COL9A3Q14050 684 aaPredicted RBP18.24■□□□□ 0.51
SNRPN-201ENST00000346403 PGM5Q15124 567 aa18.24■□□□□ 0.51
SNRPN-201ENST00000346403 SRBD1Q8N5C6 995 aaKnown RBP18.24■□□□□ 0.51
SNRPN-201ENST00000346403 DEFB123Q8N688 67 aa18.24■□□□□ 0.51
SNRPN-201ENST00000346403 FANCBQ8NB91 859 aa18.24■□□□□ 0.51
SNRPN-201ENST00000346403 AFG1LQ8WV93 481 aa18.24■□□□□ 0.51
SNRPN-201ENST00000346403 CUL5Q93034 780 aa18.24■□□□□ 0.51
SNRPN-201ENST00000346403 RNPC3Q96LT9 517 aaKnown RBP18.24■□□□□ 0.51
SNRPN-201ENST00000346403 PPP1R12CQ9BZL4 782 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms